Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22176 Vaccinium macrocarpon HOM05D003663 ORTHO05D005327 6.6e-154 547.4 281 100.0
Rhsim09G0213000 Rhododendron simsii HOM05D003663 ORTHO05D005327 8.5e-101 370.9 261 78.2
TAR374G1477 Trochodendron aralioides HOM05D003663 ORTHO05D005327 1.5e-57 227.3 257 54.5
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 4.1e-55 219.2 234 53.8
CSS0037566 Camellia sinensis var. sinensis HOM05D003663 ORTHO05D005327 7.3e-52 208.4 185 60.5
Oeu027885.1 Olea europaea HOM05D003663 ORTHO05D005327 1.2e-51 207.6 197 58.4
Potri.019G049600 Populus trichocarpa HOM05D003663 ORTHO05D005327 1.2e-51 207.6 240 54.2
MBI04_g20973_MAGBIO Magnolia biondii HOM05D003663 ORTHO05D005327 4.0e-50 202.6 246 52.4
Lalb_Chr05g0220821 Lupinus albus HOM05D003663 ORTHO05D005327 1.2e-49 201.1 249 50.2
Lj3P887T57 Lonicera japonica HOM05D003663 ORTHO05D005327 5.8e-49 198.7 194 56.7
Nitab4.5_0000021g0580 Nicotiana tabacum HOM05D003663 ORTHO05D005327 1.3e-48 197.6 246 46.7
Rhsim03G0221600 Rhododendron simsii HOM05D003663 ORTHO05D005327 1.3e-48 197.6 198 55.6
Oeu060390.1 Olea europaea HOM05D002083 ORTHO05D000332 3.7e-48 196.1 230 51.7
Sabra19G0059300 Salix brachista HOM05D003663 ORTHO05D005327 3.7e-48 196.1 253 47.4
Nn3g19378 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.4e-47 194.1 174 59.2
Duzib106G1874 Durio zibethinus HOM05D003663 ORTHO05D005327 5.4e-47 192.2 254 47.6
Duzib177G0557 Durio zibethinus HOM05D003663 ORTHO05D005327 5.4e-47 192.2 237 50.6
TWI34G0428 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 5.4e-47 192.2 198 55.6
Haze_00422 Corylus avellana HOM05D003663 ORTHO05D005327 9.2e-47 191.4 256 49.2
Lsat_1_v5_gn_2_136720 Lactuca sativa HOM05D003663 ORTHO05D005327 2.0e-46 190.3 221 46.2
Nitab4.5_0001762g0070 Nicotiana tabacum HOM05D003663 ORTHO05D005327 6.0e-46 188.7 252 44.0
Peaxi162Scf00815g00311 Petunia axillaris HOM05D003663 ORTHO05D005327 7.8e-46 188.3 190 53.2
VMungo0251G1526 Vigna mungo HOM05D003663 ORTHO05D005327 1.3e-45 187.6 227 51.5
Manes.09G126900 Manihot esculenta HOM05D003663 ORTHO05D005327 8.6e-45 184.9 236 47.9
CAN.G65.131 Capsicum annuum HOM05D003663 ORTHO05D005327 1.5e-44 184.1 227 48.0
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 2.5e-44 183.3 242 47.1
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 4.3e-44 182.6 187 57.8
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 4.3e-44 182.6 189 52.4
CiPaw.06G032900 Carya illinoinensis HOM05D003663 ORTHO05D005327 5.6e-44 182.2 192 54.7
Phvul.003G226500 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 5.6e-44 182.2 225 48.4
QL09p023778 Quercus lobata HOM05D003663 ORTHO05D005327 7.3e-44 181.8 245 48.2
Sc13g0010870 Simmondsia chinensis HOM05D003663 ORTHO05D005327 9.5e-44 181.4 180 55.0
HanXRQChr14g0462981 Helianthus annuus HOM05D003663 ORTHO05D005327 1.2e-43 181.0 184 49.5
Cpa.g.sc504.5 Carica papaya HOM05D003663 ORTHO05D005327 1.6e-43 180.6 210 49.5
Sopen06g029160 Solanum pennellii HOM05D003663 ORTHO05D005327 2.1e-43 180.3 167 53.9
Aqoxy3G02161 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 2.8e-43 179.9 181 54.1
Duzib128G0448 Durio zibethinus HOM05D003663 ORTHO05D005327 6.2e-43 178.7 199 51.8
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 1.1e-42 177.9 186 52.7
Psat4g076520 Pisum sativum HOM05D003663 ORTHO05D005327 1.8e-42 177.2 253 44.3
COL.COLO4_06064 Corchorus olitorius HOM05D003663 ORTHO05D005327 2.3e-42 176.8 248 46.8
AUR62002065 Chenopodium quinoa HOM05D003663 ORTHO05D005327 3.1e-42 176.4 175 53.7
Gohir.A11G303600 Gossypium hirsutum HOM05D003663 ORTHO05D005327 6.8e-42 175.3 181 55.2
Gohir.D11G318900 Gossypium hirsutum HOM05D003663 ORTHO05D005327 1.2e-41 174.5 179 55.3
Medtr4g099150 Medicago truncatula HOM05D003663 ORTHO05D005327 3.4e-41 172.9 227 44.9
EL10Ac3g05074 Beta vulgaris HOM05D003663 ORTHO05D005327 4.4e-41 172.6 179 51.4
SGA_v2.0_scaffold50G18444 Striga asiatica HOM05D003663 ORTHO05D005327 5.8e-41 172.2 186 51.1
PGSC0003DMG400027034 Solanum tuberosum HOM05D003663 ORTHO05D005327 7.5e-41 171.8 218 47.7
Migut.F00942 Erythranthe guttata HOM05D003663 ORTHO05D005327 2.9e-40 169.9 199 49.7
ECA233G1163 Erigeron canadensis HOM05D003663 ORTHO05D005327 3.7e-40 169.5 223 45.3
Gorai.007G348900 Gossypium raimondii HOM05D003663 ORTHO05D005327 4.9e-40 169.1 174 54.6
CANSAT21G0248 Cannabis sativa HOM05D003663 ORTHO05D005327 6.4e-40 168.7 232 46.6
TPR.G17125 Trifolium pratense HOM05D003663 ORTHO05D005327 6.4e-40 168.7 176 50.6
PGR142G2930 Punica granatum HOM05D003663 ORTHO05D005327 8.3e-40 168.3 271 41.7
PSO063G6858 Papaver somniferum HOM05D003663 ORTHO05D005327 1.1e-39 167.9 230 46.1
Ah.13g072750 Amaranthus hybridus HOM05D003663 ORTHO05D005327 1.4e-39 167.5 202 48.5
PSO782G5365 Papaver somniferum HOM05D003663 ORTHO05D005327 2.4e-39 166.8 211 46.9
Actinidia33794 Actinidia chinensis HOM05D003663 ORTHO05D005327 3.2e-39 166.4 246 47.2
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 9.2e-39 164.9 211 49.3
Eucgr.K00086 Eucalyptus grandis HOM05D003663 ORTHO05D005327 2.1e-38 163.7 215 44.2
Cc00_g28240 Coffea canephora HOM05D003663 ORTHO05D005327 6.2e-35 152.1 153 49.7
Ciclev10021912m.g Citrus clementina HOM05D003663 ORTHO05D005327 2.4e-34 150.2 250 41.2
AL6G27920 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 3.2e-31 139.8 186 42.5
Prupe.2G326500 Prunus persica HOM05D003663 ORTHO05D005327 5.4e-31 139.0 144 52.8
THA.LOC104827213 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 5.4e-31 139.0 206 41.3
Thecc.05G213800 Theobroma cacao HOM05D003663 ORTHO05D005327 7.1e-31 138.7 249 41.4
AT5G16920 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 1.6e-30 137.5 178 44.4
Thhalv10014405m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 8.7e-29 131.7 183 42.1
Carub.0006s1513 Capsella rubella HOM05D003663 ORTHO05D005327 1.1e-28 131.3 181 40.9
BraA02t05351Z Brassica rapa HOM05D003663 ORTHO05D005327 2.5e-28 130.2 160 45.6
ATR0829G139 Amborella trichopoda HOM05D003663 ORTHO05D005327 3.3e-28 129.8 231 38.5
BolC2t06783H Brassica oleracea HOM05D003663 ORTHO05D005327 3.3e-28 129.8 187 41.2
BcaC03g18525 Brassica carinata HOM05D003663 ORTHO05D005327 4.3e-28 129.4 162 45.7
C02p08670 Brassica napus HOM05D003663 ORTHO05D005327 4.3e-28 129.4 162 45.7
A02p03870 Brassica napus HOM05D003663 ORTHO05D005327 9.6e-28 128.3 162 44.4
CARHR196240 Cardamine hirsuta HOM05D003663 ORTHO05D005327 2.1e-27 127.1 212 40.1
BcaNung00434 Brassica carinata HOM05D003663 ORTHO05D005327 2.8e-27 126.7 167 40.7
Sp6g27190 Schrenkiella parvula HOM05D003663 ORTHO05D005327 3.1e-26 123.2 237 35.9
Os12g0233900 Oryza sativa ssp. japonica HOM05D003663 ORTHO05D005327 4.0e-26 122.9 205 35.1
Ca_06459_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 4.9e-24 115.9 150 39.3
Actinidia34308 Actinidia chinensis HOM05D003663 ORTHO05D005327 6.4e-24 115.5 70 80.0
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 6.4e-24 115.5 152 42.8
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 3.2e-23 113.2 153 39.2
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 9.3e-23 111.7 150 39.3
Medtr5g097370 Medicago truncatula HOM05D003663 ORTHO05D005327 9.3e-23 111.7 157 35.7
Psat2g004440 Pisum sativum HOM05D003663 ORTHO05D005327 9.3e-23 111.7 153 39.2
Glyma.14G007200 Glycine max HOM05D003663 ORTHO05D005327 1.2e-22 111.3 177 34.5
VMungo0540G0424 Vigna mungo HOM05D003663 ORTHO05D005327 1.6e-22 110.9 159 38.4
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 3.5e-22 109.8 169 37.3
LjContig00081g0009748 Lotus japonicus HOM05D003663 ORTHO05D005327 3.5e-22 109.8 179 34.6
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 4.6e-22 109.4 88 70.5
Phvul.008G285700 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 1.0e-21 108.2 155 37.4
TPR.G1287 Trifolium pratense HOM05D003663 ORTHO05D005327 1.0e-21 108.2 150 36.7
Nn1g01862 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.3e-21 107.8 133 48.1
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 1.3e-21 107.8 134 40.3
VMungo0647G1338 Vigna mungo HOM05D003663 ORTHO05D005327 1.3e-21 107.8 179 36.3
Aqoxy3G02718 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.1e-20 104.8 152 35.5
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 1.1e-20 104.8 157 36.9
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 1.1e-20 104.8 153 35.9
Glyma.09G012100 Glycine max HOM05D003663 ORTHO05D005327 1.5e-20 104.4 153 35.3
Lalb_Chr16g0386341 Lupinus albus HOM05D003663 ORTHO05D005327 1.5e-20 104.4 93 54.8
ATR0624G116 Amborella trichopoda HOM05D003663 ORTHO05D005327 2.5e-20 103.6 192 33.3
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 2.5e-20 103.6 168 37.5
arahy.Tifrunner.gnm1.ann1.8QBK2E Arachis hypogaea HOM05D003663 ORTHO05D005327 5.6e-20 102.4 181 32.6
arahy.Tifrunner.gnm1.ann1.P7DY53 Arachis hypogaea HOM05D003663 ORTHO05D005327 5.6e-20 102.4 181 32.6
TWI36G0551 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 7.3e-20 102.1 213 31.9
Phvul.006G141400 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 9.6e-20 101.7 159 34.6
Prupe.4G006800 Prunus persica HOM05D003663 ORTHO05D005327 1.6e-19 100.9 129 39.5
TAR627G0054 Trochodendron aralioides HOM05D003663 ORTHO05D005327 2.1e-19 100.5 199 34.7
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 2.8e-19 100.1 152 34.2
Lalb_Chr17g0349111 Lupinus albus HOM05D003663 ORTHO05D005327 3.6e-19 99.8 150 36.7
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 4.8e-19 99.4 157 34.4
FAN25G1738 Fragaria x ananassa HOM05D003663 ORTHO05D005327 1.8e-18 97.4 129 38.8
TWI38G0283 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 1.8e-18 97.4 133 33.8
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 2.4e-18 97.1 154 34.4
FvH4_3g00560 Fragaria vesca HOM05D003663 ORTHO05D005327 3.1e-18 96.7 129 38.0
Aqoxy1G04227 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 5.3e-18 95.9 183 37.2
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 6.9e-18 95.5 161 31.7
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 6.9e-18 95.5 161 31.7
Thhalv10005288m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 1.2e-17 94.7 132 37.1
ClCG02G002710 Citrullus lanatus HOM05D003663 ORTHO05D005327 1.5e-17 94.4 137 37.2
MELO3C024107.2 Cucumis melo HOM05D003663 ORTHO05D005327 1.3e-16 91.3 130 36.2
Sed0003500 Sechium edule HOM05D003663 ORTHO05D005327 2.9e-16 90.1 157 33.8
CsaV3_7G023690 Cucumis sativus L. HOM05D003663 ORTHO05D005327 3.8e-16 89.7 130 36.2
Ciclev10017620m.g Citrus clementina HOM05D003663 ORTHO05D005327 1.1e-15 88.2 130 36.2
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 1.1e-15 88.2 109 38.5
Sed0002316 Sechium edule HOM05D003663 ORTHO05D005327 1.1e-15 88.2 121 34.7
MELO3C028604.2 Cucumis melo HOM05D003663 ORTHO05D005327 1.4e-15 87.8 158 34.8
Aqoxy1G04229 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 2.4e-15 87.0 164 32.3
PGR142G2458 Punica granatum HOM05D003663 ORTHO05D005327 2.4e-15 87.0 166 33.1
CARHR186960 Cardamine hirsuta HOM05D003663 ORTHO05D005327 4.2e-15 86.3 165 30.3
AT5G26730 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 7.1e-15 85.5 133 32.3
Aqoxy1G04228 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.2e-14 84.7 134 35.1
AL6G38450 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 1.2e-14 84.7 133 32.3
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 1.2e-14 84.7 157 33.8
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 1.2e-14 84.7 157 33.8
Sed0020467 Sechium edule HOM05D003663 ORTHO05D005327 1.2e-14 84.7 121 33.1
BcaNung02825 Brassica carinata HOM05D003663 ORTHO05D005327 3.5e-14 83.2 138 34.8
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 3.5e-14 83.2 138 34.8
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 3.5e-14 83.2 138 34.8
Sp2g21370 Schrenkiella parvula HOM05D003663 ORTHO05D005327 3.5e-14 83.2 116 33.6
Sed0016160 Sechium edule HOM05D003663 ORTHO05D005327 3.5e-14 83.2 126 36.5
Eucgr.L03441 Eucalyptus grandis HOM05D003663 ORTHO05D005327 6.0e-14 82.4 120 34.2
Carub.0006s2423 Capsella rubella HOM05D003663 ORTHO05D005327 7.9e-14 82.0 160 30.6
MD09G1122000 Malus domestica HOM05D003663 ORTHO05D005327 1.3e-13 81.3 134 34.3
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 2.3e-13 80.5 165 30.3
PSO210G1796 Papaver somniferum HOM05D003663 ORTHO05D005327 3.9e-13 79.7 164 31.1
ClCG01G010650 Citrullus lanatus HOM05D003663 ORTHO05D005327 5.1e-13 79.3 122 31.1
THA.LOC104826655 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 6.7e-13 79.0 152 30.9
PSO302G0013 Papaver somniferum HOM05D003663 ORTHO05D005327 8.7e-13 78.6 177 29.9
Prupe.3G201600 Prunus persica HOM05D003663 ORTHO05D005327 5.6e-12 75.9 127 36.2
RcHm_v2.0_Chr2g0156681 Rosa chinensis HOM05D003663 ORTHO05D005327 8.1e-11 72.0 105 33.3
Glyma.02G305800 Glycine max HOM05D003663 ORTHO05D005327 1.1e-10 71.6 103 36.9
BcaB04g19726 Brassica carinata HOM05D003663 ORTHO05D005327 2.6e-09 67.0 80 36.2
Medtr2g026520 Medicago truncatula HOM05D003663 ORTHO05D005327 1.7e-08 64.3 115 33.0
CsaV3_7G002660 Cucumis sativus L. HOM05D003663 ORTHO05D005327 2.2e-08 63.9 120 32.5
Potri.016G009000 Populus trichocarpa HOM05D003663 ORTHO05D005327 4.9e-08 62.8 60 45.0
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 2.7e-06 57.0 132 28.0
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 3.5e-06 56.6 141 29.8
Pp3c1_4130 Physcomitrium patens HOM05D022662 ORTHO05D006223 7.9e-06 55.5 176 24.4


User provided reference genes

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