Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 0.0e+00 1207.2 613 100.0
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 0.0e+00 1205.7 613 99.7
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.1e-275 953.0 612 78.6
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 3.4e-264 914.8 614 76.5
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 1.5e-259 899.4 613 73.9
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 3.7e-242 841.6 653 71.4
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 5.4e-225 784.6 619 66.6
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 6.2e-213 744.6 617 63.4
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 1.3e-210 736.9 625 62.4
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 2.4e-209 732.6 614 61.9
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 9.2e-209 730.7 612 62.3
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 6.6e-207 724.5 626 63.6
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 5.2e-204 714.9 649 60.1
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 1.2e-203 713.8 614 62.1
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 2.6e-203 712.6 615 61.3
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 2.1e-200 703.0 618 61.0
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 2.7e-200 702.6 626 60.9
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 3.9e-199 698.7 650 58.8
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 5.1e-199 698.4 613 60.2
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 8.6e-199 697.6 613 61.7
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 4.3e-198 695.3 526 66.3
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 7.3e-198 694.5 619 60.1
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 2.8e-197 692.6 619 59.9
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 3.4e-195 685.6 619 59.6
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 1.2e-192 677.2 624 59.1
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 3.5e-192 675.6 611 60.1
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 7.8e-192 674.5 637 58.2
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 1.3e-191 673.7 620 60.3
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 1.9e-190 669.8 625 59.8
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 7.3e-190 667.9 620 59.0
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 7.3e-190 667.9 619 58.3
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 3.6e-189 665.6 622 60.1
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 1.4e-188 663.7 622 58.4
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 1.8e-188 663.3 642 58.4
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 4.0e-188 662.1 611 57.8
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.5e-187 660.2 623 58.4
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 1.3e-186 657.1 619 58.8
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.7e-186 656.8 611 57.8
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 3.8e-186 655.6 615 58.0
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 2.4e-185 652.9 630 57.3
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 4.2e-185 652.1 618 57.4
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 1.3e-183 647.1 579 59.8
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 2.5e-182 642.9 597 58.1
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 1.6e-181 640.2 648 56.2
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 1.2e-179 634.0 620 57.6
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 4.4e-179 632.1 570 58.9
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 2.9e-178 629.4 614 56.5
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 1.4e-177 627.1 620 56.1
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 3.2e-177 625.9 654 55.8
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 7.1e-177 624.8 515 64.3
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 1.2e-176 624.0 618 54.7
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 2.1e-176 623.2 635 53.9
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 4.6e-176 622.1 633 54.5
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 1.7e-175 620.2 606 56.4
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 3.0e-175 619.4 620 56.0
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 7.3e-174 614.8 618 55.3
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 7.3e-174 614.8 613 54.5
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 2.1e-173 613.2 684 51.3
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 1.1e-172 610.9 615 53.7
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 1.4e-172 610.5 609 55.5
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 1.8e-172 610.1 558 58.4
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 2.0e-171 606.7 599 55.3
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 3.8e-170 602.4 609 55.8
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 3.8e-170 602.4 614 54.2
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 4.9e-170 602.1 605 55.0
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 7.1e-169 598.2 519 59.9
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 9.3e-169 597.8 622 53.9
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 3.5e-168 595.9 613 54.3
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 1.0e-167 594.3 547 57.4
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 5.1e-167 592.0 612 54.6
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 8.7e-167 591.3 677 50.7
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 2.5e-166 589.7 618 52.9
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 2.5e-166 589.7 621 53.0
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 2.0e-163 580.1 668 50.0
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 4.5e-163 578.9 615 53.5
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 1.3e-162 577.4 609 52.9
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 2.2e-162 576.6 569 56.2
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 3.8e-162 575.9 626 51.0
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 8.4e-162 574.7 618 52.3
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 3.7e-157 559.3 641 51.8
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 2.4e-156 556.6 624 52.6
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 4.1e-156 555.8 494 59.3
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 6.9e-156 555.1 641 49.5
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 3.4e-155 552.7 578 53.8
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 4.5e-155 552.4 628 51.1
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 7.2e-153 545.0 627 51.8
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 2.7e-152 543.1 515 56.7
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 1.0e-151 541.2 622 51.1
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 1.3e-151 540.8 577 53.6
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 2.5e-150 536.6 578 52.9
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 4.8e-149 532.3 608 51.6
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 7.2e-145 518.5 444 60.4
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 3.7e-141 506.1 637 48.0
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 5.0e-138 495.7 495 54.3
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 2.5e-129 466.8 599 45.7
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 8.2e-125 451.8 413 55.2
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 3.4e-118 429.9 524 46.9
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 3.0e-98 363.6 450 48.4
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 4.3e-89 333.2 555 38.7
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 7.3e-89 332.4 301 62.1
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 3.4e-86 323.6 497 38.4
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 1.2e-80 305.1 461 40.1
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 1.6e-80 304.7 516 38.2
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 7.1e-68 262.7 192 72.4
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.1e-60 238.8 205 61.5
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 2.4e-52 211.1 325 37.8
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 1.5e-41 175.3 574 27.5
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 7.7e-30 136.3 432 28.0
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 1.0e-26 125.9 575 24.7
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 1.0e-26 125.9 123 56.1
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 8.8e-26 122.9 369 30.9
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.1e-23 114.4 124 54.0
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.1e-23 114.4 124 54.0
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.3e-23 113.6 124 54.0
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.3e-23 113.6 124 54.0
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 2.8e-16 91.3 68 66.2
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 4.1e-15 87.4 203 36.0
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 1.3e-13 82.4 113 40.7
Dinv40115 Davidia involucrata HOM05D006562 ORTHO05D008230 4.4e-09 67.4 81 53.1
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 7.5e-09 66.6 79 54.4
AL142U10030 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 1.1e-07 62.8 305 23.9
AL2G37830 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 1.1e-07 62.8 305 23.9
CARHR071130 Cardamine hirsuta HOM05D004094 ORTHO05D004601 1.1e-07 62.8 285 22.8
Carub.0002s2451 Capsella rubella HOM05D004094 ORTHO05D004601 7.0e-07 60.1 301 21.6
A07p43010 Brassica napus HOM05D004094 ORTHO05D004601 3.5e-06 57.8 316 21.2
BraA07t31822Z Brassica rapa HOM05D004094 ORTHO05D004601 5.9e-06 57.0 324 21.0
Cre12.g521200 Chlamydomonas reinhardtii HOM05D004977 ORTHO05D006454 5.9e-06 57.0 277 22.7
Thhalv10018028m.g Eutrema salsugineum HOM05D004094 ORTHO05D004601 5.9e-06 57.0 322 21.7
THA.LOC104800189 Tarenaya hassleriana HOM05D004094 ORTHO05D004601 7.7e-06 56.6 314 23.2


User provided reference genes

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