Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 4.8e-55 217.6 113 100.0
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 2.4e-38 162.2 87 95.4
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 2.0e-37 159.1 115 73.9
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 2.2e-36 155.6 87 90.8
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 3.8e-36 154.8 85 92.9
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 1.5e-35 152.9 87 89.7
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 5.5e-35 151.0 87 89.7
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 5.5e-35 151.0 87 89.7
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 7.2e-35 150.6 88 88.6
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 9.5e-35 150.2 86 86.0
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 1.6e-34 149.4 87 88.5
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 1.6e-34 149.4 87 86.2
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 2.1e-34 149.1 84 86.9
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 6.1e-34 147.5 87 81.6
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 8.0e-34 147.1 87 86.2
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 8.0e-34 147.1 87 83.9
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 8.0e-34 147.1 87 83.9
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 1.4e-33 146.4 85 83.5
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 1.8e-33 146.0 87 85.1
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 3.0e-33 145.2 87 82.8
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 3.0e-33 145.2 85 85.9
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 3.0e-33 145.2 85 85.9
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 1.2e-32 143.3 87 80.5
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 1.5e-32 142.9 83 88.0
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 1.5e-32 142.9 83 88.0
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 2.0e-32 142.5 82 87.8
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 2.6e-32 142.1 87 82.8
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 3.4e-32 141.7 80 88.8
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 3.4e-32 141.7 80 90.0
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 4.4e-32 141.4 81 88.9
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 4.4e-32 141.4 87 78.2
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 5.7e-32 141.0 87 81.6
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 7.5e-32 140.6 88 84.1
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 7.5e-32 140.6 88 84.1
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 7.5e-32 140.6 87 81.6
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 7.5e-32 140.6 87 79.3
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 9.8e-32 140.2 82 86.6
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 9.8e-32 140.2 87 82.8
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 9.8e-32 140.2 84 83.3
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 1.3e-31 139.8 88 84.1
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 1.3e-31 139.8 87 83.9
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 1.3e-31 139.8 84 82.1
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 1.7e-31 139.4 88 83.0
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 1.7e-31 139.4 88 77.3
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 1.7e-31 139.4 82 85.4
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 2.2e-31 139.0 88 83.0
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 2.2e-31 139.0 85 83.5
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 2.2e-31 139.0 88 83.0
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 2.8e-31 138.7 88 83.0
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 2.8e-31 138.7 87 81.6
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 2.8e-31 138.7 87 81.6
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 3.7e-31 138.3 88 83.0
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 3.7e-31 138.3 80 87.5
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 3.7e-31 138.3 80 87.5
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 6.3e-31 137.5 88 81.8
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 6.3e-31 137.5 87 81.6
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 1.8e-30 136.0 88 81.8
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 3.1e-30 135.2 85 81.2
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 3.1e-30 135.2 85 81.2
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 4.1e-30 134.8 85 81.2
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 4.1e-30 134.8 88 80.7
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 5.4e-30 134.4 85 81.2
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 9.2e-30 133.7 80 83.8
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 1.6e-29 132.9 87 78.2
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 1.6e-29 132.9 90 77.8
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 1.0e-28 130.2 87 75.9
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 3.8e-28 128.3 86 76.7
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 8.6e-28 127.1 86 75.6
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 4.3e-27 124.8 83 77.1
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 5.6e-27 124.4 70 88.6
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 5.6e-27 124.4 85 77.6
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 9.5e-27 123.6 73 84.9
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.1e-26 122.5 75 81.3
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 3.6e-26 121.7 86 72.1
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 3.6e-26 121.7 88 72.7
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 2.3e-25 119.0 85 72.9
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 2.3e-25 119.0 70 85.7
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 3.0e-25 118.6 88 70.5
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 1.5e-24 116.3 87 66.7
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 1.7e-23 112.8 87 65.5
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 3.7e-23 111.7 83 71.1
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 4.9e-23 111.3 72 73.6
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 8.3e-23 110.5 83 67.5
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 3.2e-22 108.6 80 72.5
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 5.4e-22 107.8 72 73.6
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 7.0e-22 107.5 68 79.4
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 2.7e-21 105.5 62 85.5
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 4.6e-21 104.8 68 77.9
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 4.6e-21 104.8 80 72.5
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 1.3e-20 103.2 60 83.3
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 1.7e-20 102.8 82 70.7
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 1.7e-20 102.8 74 78.4
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 3.9e-20 101.7 76 75.0
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 1.1e-19 100.1 61 82.0
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 7.3e-19 97.4 96 57.3
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 7.3e-19 97.4 82 68.3
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 7.3e-19 97.4 74 67.6
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 9.5e-19 97.1 55 89.1
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 4.0e-17 91.7 93 64.5
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 5.8e-16 87.8 76 59.2
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 8.3e-15 84.0 57 73.7
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.4e-14 83.2 62 71.0
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 3.2e-14 82.0 101 51.5
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 6.0e-13 77.8 52 73.1
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 3.3e-11 72.0 66 54.5
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 5.6e-11 71.2 83 47.0
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 1.5e-08 63.2 55 63.6
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 3.7e-07 58.5 64 42.2
TAR369G0162 Trochodendron aralioides HOM05D002795 ORTHO05D000638 3.7e-07 58.5 38 71.1
Hma1.2p1_0735F.1_g210440 Hydrangea macrophylla HOM05D003704 ORTHO05D005892 1.9e-06 56.2 32 90.6


User provided reference genes

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