Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22131 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.1e-163 580.1 331 100.0
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 2.3e-81 306.6 302 64.2
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 2.3e-81 306.6 302 64.2
vmacro21924 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 7.7e-53 211.8 188 66.0
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 5.6e-51 205.7 367 49.9
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.1e-33 148.3 353 44.2
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 9.8e-32 141.7 355 37.2
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 4.9e-31 139.4 346 35.5
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.9e-30 137.5 355 38.0
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 2.1e-29 134.0 354 38.1
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 2.1e-26 124.0 347 38.3
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 4.7e-26 122.9 357 35.6
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 1.4e-25 121.3 384 34.4
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 1.8e-25 120.9 360 40.6
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 3.8e-23 113.2 353 36.3
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 6.4e-23 112.5 335 39.4
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 1.1e-22 111.7 347 34.6
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 1.4e-22 111.3 323 34.4
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 5.4e-22 109.4 342 31.3
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 7.1e-22 109.0 358 33.2
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 9.2e-22 108.6 360 37.8
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.2e-21 108.2 357 34.2
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 1.6e-21 107.8 328 40.9
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 2.7e-21 107.1 350 37.1
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 2.7e-21 107.1 346 32.4
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 3.5e-21 106.7 347 35.2
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 4.6e-21 106.3 333 39.9
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 4.6e-21 106.3 351 31.3
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 4.6e-21 106.3 353 35.7
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 6.0e-21 105.9 345 37.4
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 1.0e-20 105.1 343 37.3
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 1.3e-20 104.8 429 31.9
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.3e-20 104.8 328 39.3
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 2.3e-20 104.0 352 30.4
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 3.9e-20 103.2 357 37.8
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 1.1e-19 101.7 356 37.9
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 1.9e-19 100.9 341 30.5
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 3.3e-19 100.1 353 38.0
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 3.3e-19 100.1 376 34.3
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 4.3e-19 99.8 330 32.7
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 5.6e-19 99.4 347 32.9
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 7.3e-19 99.0 344 35.8
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 7.3e-19 99.0 345 35.4
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 1.6e-18 97.8 354 37.9
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 1.6e-18 97.8 350 29.4
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 1.6e-18 97.8 350 36.3
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 2.8e-18 97.1 348 31.0
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 3.6e-18 96.7 348 33.0
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 4.7e-18 96.3 355 34.4
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 4.7e-18 96.3 334 35.9
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 6.2e-18 95.9 349 40.1
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 6.2e-18 95.9 360 32.2
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 8.1e-18 95.5 373 34.6
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 8.1e-18 95.5 365 34.2
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 1.1e-17 95.1 336 37.8
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 1.4e-17 94.7 348 34.2
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 3.1e-17 93.6 353 36.8
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 3.1e-17 93.6 300 37.7
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 4.0e-17 93.2 326 31.0
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 5.2e-17 92.8 317 39.1
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 5.2e-17 92.8 348 33.0
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 8.9e-17 92.0 328 39.9
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 1.2e-16 91.7 345 35.1
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 1.2e-16 91.7 365 32.6
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.5e-16 91.3 355 29.6
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.6e-16 90.5 343 30.0
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 3.4e-16 90.1 353 29.2
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 4.4e-16 89.7 326 32.2
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 5.8e-16 89.4 360 29.4
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 5.8e-16 89.4 353 29.2
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 5.8e-16 89.4 351 31.1
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 5.8e-16 89.4 312 35.6
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 9.9e-16 88.6 351 34.8
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 9.9e-16 88.6 340 27.6
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 9.9e-16 88.6 297 33.7
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.3e-15 88.2 325 28.9
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 3.8e-15 86.7 350 34.0
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 4.9e-15 86.3 319 38.9
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 6.4e-15 85.9 248 38.7
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 6.4e-15 85.9 351 32.8
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 1.1e-14 85.1 366 34.7
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 1.9e-14 84.3 315 29.8
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 1.9e-14 84.3 345 36.2
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 1.9e-14 84.3 369 34.7
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 4.2e-14 83.2 355 29.3
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 4.2e-14 83.2 333 36.6
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 7.1e-14 82.4 335 34.9
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 9.3e-14 82.0 357 34.2
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 1.2e-13 81.6 275 39.3
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 1.6e-13 81.3 369 29.8
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 1.6e-13 81.3 278 37.8
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 2.1e-13 80.9 339 36.6
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 2.1e-13 80.9 330 40.0
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 3.5e-13 80.1 347 35.2
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 7.8e-13 79.0 274 29.9
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 7.8e-13 79.0 274 29.6
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 1.3e-12 78.2 338 29.9
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 2.3e-12 77.4 299 41.1
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 3.9e-12 76.6 347 35.2
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 5.1e-12 76.3 324 31.2
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 6.6e-12 75.9 350 34.0
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 6.6e-12 75.9 220 34.1
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 4.3e-11 73.2 360 26.4
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 5.6e-11 72.8 210 35.2
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 7.3e-11 72.4 393 31.8
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 1.3e-10 71.6 221 33.9
Atru.chr1.3647 Acer truncatum HOM05D003676 ORTHO05D004262 2.1e-10 70.9 95 52.6
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 2.8e-10 70.5 338 26.6
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 2.8e-10 70.5 317 36.0
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 6.2e-10 69.3 313 29.7
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 8.1e-10 68.9 319 28.8
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 8.1e-10 68.9 314 26.8
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 1.1e-09 68.6 338 28.7
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.8e-09 67.8 365 32.6
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 3.1e-09 67.0 210 31.4
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 4.0e-09 66.6 222 31.1
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 5.3e-09 66.2 313 27.8
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 6.9e-09 65.9 328 37.5
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 1.2e-08 65.1 323 36.8
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.2e-08 65.1 319 29.5
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 2.0e-08 64.3 331 35.6
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 2.6e-08 63.9 218 30.7
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 2.6e-08 63.9 132 38.6
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 2.6e-08 63.9 331 36.0
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 3.4e-08 63.5 276 29.3
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 4.5e-08 63.2 122 35.2
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.5e-08 63.2 358 34.4
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 1.3e-07 61.6 313 25.6
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 2.2e-07 60.8 112 43.8
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.9e-07 60.5 358 29.1
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 4.9e-07 59.7 208 31.7
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 4.9e-07 59.7 322 26.7
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 4.9e-07 59.7 342 28.1
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 6.4e-07 59.3 334 36.2
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 2.4e-06 57.4 278 29.5
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 3.2e-06 57.0 321 24.9
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 7.1e-06 55.8 216 29.2


User provided reference genes

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