Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22116 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 6.6e-44 180.3 87 100.0
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.5e-19 99.4 96 61.5
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.5e-19 99.4 96 61.5
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 2.8e-18 95.1 96 56.2
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 2.6e-16 88.6 96 53.1
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 7.6e-16 87.0 98 54.1
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 3.2e-14 81.6 96 53.1
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 5.1e-12 74.3 95 46.3
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 6.6e-12 73.9 64 48.4
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 3.3e-11 71.6 96 43.8
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 8.1e-10 67.0 96 44.8
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.1e-09 66.6 96 44.8
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.1e-09 66.6 96 44.8
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 2.4e-09 65.5 96 39.6
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 2.4e-09 65.5 96 39.6
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 4.0e-09 64.7 98 37.8
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 9.0e-09 63.5 98 38.8
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 1.5e-08 62.8 98 37.8
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 2.6e-08 62.0 98 37.8
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 3.4e-08 61.6 98 37.8
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 3.4e-08 61.6 98 37.8
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 3.4e-08 61.6 98 37.8
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 3.4e-08 61.6 98 37.8
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 3.4e-08 61.6 98 37.8
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 4.4e-08 61.2 98 37.8
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 4.4e-08 61.2 98 36.7
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 4.4e-08 61.2 96 40.6
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 5.8e-08 60.8 98 36.7
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 5.8e-08 60.8 39 66.7
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 7.6e-08 60.5 98 35.7
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.3e-07 59.7 97 43.3
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 2.9e-07 58.5 37 70.3
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 3.8e-07 58.2 98 34.7
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 3.8e-07 58.2 98 34.7
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 6.4e-07 57.4 96 36.5
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 6.4e-07 57.4 96 38.5
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 8.4e-07 57.0 95 36.8
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.1e-06 56.6 96 35.4
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.1e-06 56.6 96 35.4
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.1e-06 56.6 96 35.4
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 1.4e-06 56.2 96 36.5
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 1.4e-06 56.2 39 59.0
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 1.4e-06 56.2 95 35.8
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 1.4e-06 56.2 95 33.7
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 1.9e-06 55.8 96 37.5
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 1.9e-06 55.8 39 64.1
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 2.4e-06 55.5 96 35.4
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 2.4e-06 55.5 41 61.0
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 2.4e-06 55.5 96 35.4
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 3.2e-06 55.1 92 33.7
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 3.2e-06 55.1 92 34.8
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 3.2e-06 55.1 41 58.5
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 3.2e-06 55.1 55 49.1
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 4.2e-06 54.7 101 35.6
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 5.4e-06 54.3 95 35.8
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 5.4e-06 54.3 95 35.8
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 5.4e-06 54.3 95 35.8
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 5.4e-06 54.3 101 35.6
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 5.4e-06 54.3 98 35.7
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 5.4e-06 54.3 96 35.4
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 7.1e-06 53.9 95 35.8
TAR090G0004 Trochodendron aralioides HOM05D000667 ORTHO05D002614 7.1e-06 53.9 29 82.8
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 9.3e-06 53.5 96 36.5
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 9.3e-06 53.5 96 37.5
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 9.3e-06 53.5 96 37.5
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 9.3e-06 53.5 96 37.5
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 9.3e-06 53.5 52 53.8


User provided reference genes

Program Settings