Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 2.3e-221 771.9 394 100.0
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 1.8e-101 373.6 371 57.7
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 3.7e-94 349.4 377 55.4
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 1.0e-91 341.3 351 57.3
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 4.1e-85 319.3 347 53.3
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 4.7e-81 305.8 329 52.9
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 5.2e-80 302.4 347 50.7
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 6.8e-80 302.0 349 51.0
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 1.2e-79 301.2 343 50.1
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 1.2e-79 301.2 351 50.4
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 2.6e-79 300.1 351 51.3
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 2.6e-79 300.1 343 50.1
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 9.8e-79 298.1 328 52.1
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 9.8e-79 298.1 276 58.0
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 2.2e-78 297.0 352 49.4
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.8e-77 293.9 358 48.6
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 1.8e-77 293.9 351 49.3
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 3.1e-77 293.1 349 50.1
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 7.0e-77 292.0 350 49.4
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 3.5e-76 289.7 353 49.0
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 3.5e-76 289.7 355 47.9
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 4.5e-76 289.3 346 48.0
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 4.5e-76 289.3 273 56.4
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 4.5e-76 289.3 360 48.3
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 4.5e-76 289.3 360 48.3
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 7.8e-76 288.5 347 50.7
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.0e-75 288.1 360 49.4
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 1.0e-75 288.1 352 48.0
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.3e-75 287.7 346 49.1
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 1.7e-75 287.3 290 54.8
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 2.9e-75 286.6 363 47.1
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 5.0e-75 285.8 319 51.1
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 6.6e-75 285.4 347 48.7
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 6.6e-75 285.4 361 49.6
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 8.6e-75 285.0 355 47.9
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.1e-74 284.6 325 49.5
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 1.5e-74 284.3 346 48.8
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 1.9e-74 283.9 357 48.2
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 1.9e-74 283.9 362 47.8
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 3.3e-74 283.1 276 55.8
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 4.3e-74 282.7 360 47.5
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 7.3e-74 282.0 276 55.8
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 7.3e-74 282.0 361 47.9
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 1.2e-73 281.2 274 55.1
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 1.2e-73 281.2 276 55.1
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 1.2e-73 281.2 330 49.7
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 1.2e-73 281.2 341 48.7
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 1.6e-73 280.8 345 47.8
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 1.6e-73 280.8 274 54.4
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 3.6e-73 279.6 274 54.4
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 1.0e-72 278.1 350 50.0
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 1.4e-72 277.7 274 54.7
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.8e-72 277.3 347 47.3
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 1.8e-72 277.3 327 49.5
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 2.0e-71 273.9 346 46.5
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 4.4e-71 272.7 353 47.0
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 7.5e-71 271.9 351 45.9
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 2.2e-70 270.4 346 46.2
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.9e-70 270.0 349 48.1
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 8.3e-70 268.5 275 53.5
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 3.2e-69 266.5 279 51.3
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 4.1e-69 266.2 287 49.1
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 2.0e-68 263.8 326 45.4
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 2.7e-68 263.5 327 45.3
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 3.5e-68 263.1 358 46.1
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 1.0e-67 261.5 327 46.2
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 1.3e-67 261.2 356 46.6
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 1.7e-67 260.8 327 46.5
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 3.9e-67 259.6 327 45.3
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 6.6e-67 258.8 276 50.7
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 6.6e-67 258.8 276 50.7
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 6.6e-67 258.8 306 48.0
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 6.6e-67 258.8 276 50.7
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 1.1e-66 258.1 276 50.4
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 3.3e-66 256.5 276 50.0
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 1.2e-65 254.6 280 50.0
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 2.1e-65 253.8 283 49.8
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 2.8e-65 253.4 270 50.4
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 6.2e-65 252.3 364 44.8
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 8.0e-65 251.9 277 49.8
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 8.0e-65 251.9 277 49.8
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 2.3e-64 250.4 178 68.0
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 1.2e-63 248.1 351 42.2
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 1.5e-63 247.7 306 46.7
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 2.6e-63 246.9 352 42.3
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 5.8e-63 245.7 274 47.8
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 2.9e-62 243.4 386 42.5
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 2.9e-62 243.4 291 47.1
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 8.3e-62 241.9 269 49.8
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 7.0e-61 238.8 178 64.0
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 3.5e-60 236.5 332 43.4
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 7.8e-60 235.3 178 62.4
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 1.3e-59 234.6 359 41.2
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 4.7e-57 226.1 271 48.0
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 6.8e-56 222.2 121 82.6
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 8.9e-56 221.9 275 45.5
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 6.8e-48 195.7 297 42.8
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 1.3e-43 181.4 298 43.0
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 3.0e-43 180.3 117 69.2
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 4.4e-39 166.4 275 41.5
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 6.6e-35 152.5 92 71.7
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 3.6e-33 146.7 234 41.9
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 4.8e-33 146.4 301 34.9
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 2.4e-32 144.1 73 87.7
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 3.4e-31 140.2 97 69.1
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 4.5e-31 139.8 291 36.4
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 1.6e-28 131.3 251 39.8
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 3.5e-28 130.2 300 34.3
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.8e-24 117.9 257 38.9
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 1.2e-23 115.2 251 36.3
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 4.5e-23 113.2 149 48.3
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 2.9e-22 110.5 197 40.1
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 3.7e-17 93.6 83 59.0
Rhsim04G0095100 Rhododendron simsii HOM05D003299 ORTHO05D003811 6.0e-12 76.3 63 66.7
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 2.3e-11 74.3 160 34.4
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 58.5 72 50.0


User provided reference genes

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