Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 3.3e-128 461.8 253 100.0
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 7.0e-30 135.2 168 52.4
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 3.6e-26 122.9 150 52.0
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 6.6e-20 102.1 121 53.7
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.6e-18 97.4 121 47.1
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 2.4e-17 93.6 112 48.2
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 5.2e-17 92.4 72 62.5
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 8.9e-17 91.7 77 59.7
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 1.2e-16 91.3 129 44.2
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 1.2e-16 91.3 62 64.5
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 1.2e-16 91.3 55 72.7
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 3.4e-16 89.7 89 52.8
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 4.4e-16 89.4 84 54.8
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 5.8e-16 89.0 131 42.7
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 7.6e-16 88.6 130 43.1
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 9.9e-16 88.2 68 61.8
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 9.9e-16 88.2 117 45.3
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 1.3e-15 87.8 130 43.1
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 2.9e-15 86.7 73 63.0
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 2.9e-15 86.7 74 56.8
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 3.8e-15 86.3 99 51.5
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 3.8e-15 86.3 50 72.0
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 6.4e-15 85.5 52 65.4
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 6.4e-15 85.5 69 59.4
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 6.4e-15 85.5 122 47.5
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 6.4e-15 85.5 74 55.4
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 6.4e-15 85.5 101 46.5
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 8.4e-15 85.1 104 49.0
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 1.1e-14 84.7 72 58.3
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 1.1e-14 84.7 100 47.0
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 1.1e-14 84.7 52 67.3
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.1e-14 84.7 61 55.7
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.4e-14 84.3 78 59.0
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 1.4e-14 84.3 101 45.5
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 1.9e-14 84.0 119 43.7
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 1.9e-14 84.0 76 53.9
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 1.9e-14 84.0 82 56.1
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 2.4e-14 83.6 104 43.3
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 2.4e-14 83.6 128 44.5
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 3.2e-14 83.2 45 71.1
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 4.1e-14 82.8 74 55.4
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 4.1e-14 82.8 36 86.1
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 5.4e-14 82.4 120 39.2
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 7.1e-14 82.0 104 42.3
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 7.1e-14 82.0 104 42.3
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 7.1e-14 82.0 131 41.2
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 1.6e-13 80.9 105 45.7
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 1.6e-13 80.9 105 45.7
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 2.1e-13 80.5 47 70.2
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 2.7e-13 80.1 43 74.4
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 3.5e-13 79.7 69 59.4
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 3.5e-13 79.7 43 72.1
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.5e-13 79.7 72 45.8
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 4.6e-13 79.3 32 96.9
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 4.6e-13 79.3 38 81.6
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 4.6e-13 79.3 83 43.4
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 6.0e-13 79.0 83 43.4
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 7.8e-13 78.6 43 72.1
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 7.8e-13 78.6 43 69.8
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 2.3e-12 77.0 43 76.7
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 3.0e-12 76.6 68 55.9
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 3.9e-12 76.3 120 43.3
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 3.9e-12 76.3 48 60.4
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 3.9e-12 76.3 66 56.1
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 3.9e-12 76.3 121 42.1
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 5.1e-12 75.9 41 70.7
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 5.1e-12 75.9 124 42.7
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 5.1e-12 75.9 31 93.5
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 8.7e-12 75.1 62 56.5
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 1.1e-11 74.7 130 43.1
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 1.1e-11 74.7 131 34.4
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 1.1e-11 74.7 39 76.9
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.5e-11 74.3 46 69.6
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.5e-11 74.3 40 80.0
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 1.5e-11 74.3 40 80.0
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.9e-11 73.9 41 73.2
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 2.5e-11 73.6 29 96.6
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 2.5e-11 73.6 69 53.6
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 2.5e-11 73.6 78 51.3
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 3.3e-11 73.2 44 72.7
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 4.3e-11 72.8 44 72.7
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 4.3e-11 72.8 56 64.3
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 5.6e-11 72.4 34 79.4
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 5.6e-11 72.4 41 73.2
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 5.6e-11 72.4 45 66.7
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 9.6e-11 71.6 38 78.9
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 9.6e-11 71.6 31 90.3
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 1.6e-10 70.9 103 40.8
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 2.1e-10 70.5 193 31.6
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 2.8e-10 70.1 78 44.9
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 2.8e-10 70.1 41 65.9
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 3.6e-10 69.7 33 78.8
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 3.6e-10 69.7 33 78.8
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 4.7e-10 69.3 41 65.9
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 6.2e-10 68.9 31 83.9
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 8.1e-10 68.6 30 86.7
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 1.4e-09 67.8 30 83.3
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.8e-09 67.4 89 42.7
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 2.4e-09 67.0 63 54.0
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 3.1e-09 66.6 58 46.6
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 4.0e-09 66.2 56 50.0
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 1.5e-08 64.3 87 41.4
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 2.6e-08 63.5 160 30.0
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 3.4e-08 63.2 45 55.6
AL6G28340 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 9.3e-06 55.1 38 60.5


User provided reference genes

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