Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22095 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 8.4e-134 480.3 239 100.0
CSS0013177 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 1.6e-55 220.3 225 54.2
Dinv40055 Davidia involucrata HOM05D001544 ORTHO05D005712 1.6e-55 220.3 229 54.1
Rhsim10G0214300 Rhododendron simsii HOM05D001544 ORTHO05D005712 9.5e-53 211.1 235 54.5
Rhsim08G0035500 Rhododendron simsii HOM05D001544 ORTHO05D005712 5.8e-50 201.8 173 64.2
Nitab4.5_0010830g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 3.8e-49 199.1 200 52.5
Nitab4.5_0000753g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 8.4e-49 198.0 200 52.5
Nn5g29207 Nelumbo nucifera HOM05D001544 ORTHO05D002732 1.1e-48 197.6 226 50.0
Hma1.2p1_0266F.1_g106940 Hydrangea macrophylla HOM05D001544 ORTHO05D005712 1.9e-48 196.8 195 54.9
HanXRQChr13g0414781 Helianthus annuus HOM05D001544 ORTHO05D005712 9.6e-45 184.5 224 46.9
Migut.L00036 Erythranthe guttata HOM05D001544 ORTHO05D005712 2.8e-44 183.0 204 47.1
Lsat_1_v5_gn_2_78361 Lactuca sativa HOM05D001544 ORTHO05D005712 3.6e-44 182.6 239 45.6
MSTRG.23282 Avicennia marina HOM05D001544 ORTHO05D005712 1.1e-43 181.0 211 49.3
CSS0007563 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 1.1e-43 181.0 212 50.0
CiPaw.06G128900 Carya illinoinensis HOM05D001544 ORTHO05D005712 1.1e-43 181.0 229 48.5
QL11p046076 Quercus lobata HOM05D001544 ORTHO05D005712 1.1e-43 181.0 231 48.5
Aqoxy5G01497 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 4.0e-43 179.1 199 47.7
MELO3C023351.2 Cucumis melo HOM05D001544 ORTHO05D005712 4.0e-43 179.1 228 45.6
GSVIVG01024183001 Vitis vinifera HOM05D001544 ORTHO05D005712 5.2e-43 178.7 195 48.7
CsaV3_2G015260 Cucumis sativus L. HOM05D001544 ORTHO05D005712 6.9e-43 178.3 228 45.2
Oeu021945.1 Olea europaea HOM05D001544 ORTHO05D005712 6.9e-43 178.3 234 44.4
TAR625G1395 Trochodendron aralioides HOM05D001544 ORTHO05D005712 6.9e-43 178.3 229 47.2
SEGI_21342 Sequoiadendron giganteum HOM05D001544 ORTHO05D005712 5.8e-42 175.3 216 47.7
SGA_v2.0_scaffold51G18782 Striga asiatica HOM05D001544 ORTHO05D005712 7.6e-42 174.9 216 46.8
SalBow8G0407 Salvia bowleyana HOM05D001544 ORTHO05D005712 1.3e-41 174.1 229 44.1
Sc03g0003410 Simmondsia chinensis HOM05D001544 ORTHO05D005712 1.3e-41 174.1 223 46.6
ClCG11G003920 Citrullus lanatus HOM05D001544 ORTHO05D005712 1.7e-41 173.7 224 45.5
Solyc03g033650.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 1.7e-41 173.7 203 46.3
Hund14027 Selenicereus undatus HOM05D001544 ORTHO05D005712 4.9e-41 172.2 206 50.0
PGSC0003DMG401022539 Solanum tuberosum HOM05D001544 ORTHO05D005712 4.9e-41 172.2 203 45.8
Ciclev10029261m.g Citrus clementina HOM05D001544 ORTHO05D005712 6.4e-41 171.8 232 43.1
QL06p034007 Quercus lobata HOM05D001544 ORTHO05D005712 6.4e-41 171.8 216 45.8
Duzib132G0442 Durio zibethinus HOM05D001544 ORTHO05D005712 8.4e-41 171.4 235 45.5
HanXRQChr14g0441601 Helianthus annuus HOM05D001544 ORTHO05D005712 8.4e-41 171.4 228 45.2
MD10G1064100 Malus domestica HOM05D001544 ORTHO05D005712 1.4e-40 170.6 199 47.2
Sopen03g006440 Solanum pennellii HOM05D001544 ORTHO05D005712 1.9e-40 170.2 223 42.2
Gohir.D02G220200 Gossypium hirsutum HOM05D001544 ORTHO05D005712 2.4e-40 169.9 200 48.5
Gorai.005G248100 Gossypium raimondii HOM05D001544 ORTHO05D005712 2.4e-40 169.9 200 48.5
Sed0017058 Sechium edule HOM05D001544 ORTHO05D005712 2.4e-40 169.9 224 45.5
Potri.005G117400 Populus trichocarpa HOM05D001544 ORTHO05D005712 3.2e-40 169.5 204 47.5
vmacro21904 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 4.2e-40 169.1 190 53.7
Cpa.g.sc6.211 Carica papaya HOM05D001544 ORTHO05D005712 7.1e-40 168.3 232 43.5
Atru.chr5.3135 Acer truncatum HOM05D001544 ORTHO05D005712 9.3e-40 167.9 221 44.3
Cfa005097 Carpinus fangiana HOM05D001544 ORTHO05D005712 9.3e-40 167.9 221 45.7
Prupe.8G085800 Prunus persica HOM05D001544 ORTHO05D005712 9.3e-40 167.9 199 47.7
Eucgr.G01724 Eucalyptus grandis HOM05D001544 ORTHO05D005712 2.1e-39 166.8 199 46.7
Thecc.02G076200 Theobroma cacao HOM05D001544 ORTHO05D005712 2.7e-39 166.4 228 42.5
Gohir.A03G198800 Gossypium hirsutum HOM05D001544 ORTHO05D005712 3.5e-39 166.0 200 47.5
DCAR_025988 Daucus carota HOM05D001544 ORTHO05D005712 4.6e-39 165.6 231 44.2
PGR042G1893 Punica granatum HOM05D001544 ORTHO05D005712 1.3e-38 164.1 200 45.5
Lj3g0003276 Lotus japonicus HOM05D001544 ORTHO05D005712 3.0e-38 162.9 200 47.0
CANSAT11G1780 Cannabis sativa HOM05D001544 ORTHO05D005712 3.3e-37 159.5 211 44.5
Psat7g226160 Pisum sativum HOM05D001544 ORTHO05D005712 3.3e-37 159.5 205 44.4
SGA_v2.0_scaffold2G01246 Striga asiatica HOM05D001544 ORTHO05D005712 3.3e-37 159.5 226 43.8
PSO541G2534 Papaver somniferum HOM05D001544 ORTHO05D005712 5.6e-37 158.7 211 44.5
Phvul.011G039500 Phaseolus vulgaris HOM05D001544 ORTHO05D005712 7.3e-37 158.3 199 44.7
Lalb_Chr01g0002161 Lupinus albus HOM05D001544 ORTHO05D005712 9.6e-37 157.9 197 45.2
ECA238G2610 Erigeron canadensis HOM05D002906 ORTHO05D003211 1.3e-36 157.5 191 46.1
Glyma.01G006900 Glycine max HOM05D001544 ORTHO05D005712 1.3e-36 157.5 199 44.2
Solyc02g084550.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 1.3e-36 157.5 204 44.6
PSO675G4981 Papaver somniferum HOM05D001544 ORTHO05D005712 1.6e-36 157.1 239 41.8
Sed0002010 Sechium edule HOM05D001544 ORTHO05D005712 1.6e-36 157.1 228 42.1
PSO210G7387 Papaver somniferum HOM05D001544 ORTHO05D005712 2.1e-36 156.8 198 43.9
TWI79G0125 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 2.1e-36 156.8 210 42.4
Migut.H02483 Erythranthe guttata HOM05D001544 ORTHO05D005712 2.8e-36 156.4 194 44.8
PGSC0003DMG402003620 Solanum tuberosum HOM05D001544 ORTHO05D005712 2.8e-36 156.4 204 45.6
Glyma.11G111600 Glycine max HOM05D001544 ORTHO05D005712 6.2e-36 155.2 199 44.2
MD02G1135800 Malus domestica HOM05D001544 ORTHO05D005712 6.2e-36 155.2 214 43.5
Potri.007G016200 Populus trichocarpa HOM05D001544 ORTHO05D005712 1.1e-35 154.5 204 45.1
TWI75G0115 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 1.1e-35 154.5 220 41.8
MD15G1249400 Malus domestica HOM05D001544 ORTHO05D005712 2.4e-35 153.3 215 43.3
Manes.02G100900 Manihot esculenta HOM05D001544 ORTHO05D005712 4.0e-35 152.5 229 42.4
FAN24G0484 Fragaria x ananassa HOM05D001544 ORTHO05D005712 5.3e-35 152.1 219 42.5
Carub.0005s1750 Capsella rubella HOM05D001544 ORTHO05D005712 9.0e-35 151.4 228 42.1
Medtr4g032740 Medicago truncatula HOM05D001544 ORTHO05D005712 9.0e-35 151.4 237 41.8
Sopen02g029220 Solanum pennellii HOM05D001544 ORTHO05D005712 9.0e-35 151.4 204 43.6
Manes.01G142600 Manihot esculenta HOM05D001544 ORTHO05D005712 1.5e-34 150.6 225 43.6
Prupe.7G164800 Prunus persica HOM05D001544 ORTHO05D005712 2.0e-34 150.2 208 42.8
Peaxi162Scf00010g00610 Petunia axillaris HOM05D001544 ORTHO05D005712 2.6e-34 149.8 200 43.0
arahy.Tifrunner.gnm1.ann1.3WL649 Arachis hypogaea HOM05D001544 ORTHO05D005712 3.4e-34 149.4 223 40.8
Haze_03811 Corylus avellana HOM05D001544 ORTHO05D005712 3.4e-34 149.4 240 42.1
Sp5g11110 Schrenkiella parvula HOM05D001544 ORTHO05D005712 7.6e-34 148.3 207 44.9
CARHR160690 Cardamine hirsuta HOM05D001544 ORTHO05D005712 9.9e-34 147.9 230 41.3
Os06g0713900 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 9.9e-34 147.9 199 41.2
Aqoxy6G02390 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 1.3e-33 147.5 203 38.4
AT3G51100 Arabidopsis thaliana HOM05D001544 ORTHO05D005712 1.7e-33 147.1 231 39.8
TPR.G34176 Trifolium pratense HOM05D001544 ORTHO05D005712 1.7e-33 147.1 205 42.4
FAN20G3124 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.9e-33 146.4 212 42.9
FvH4_2g10310 Fragaria vesca HOM05D001544 ORTHO05D005712 4.9e-33 145.6 208 42.8
Aa31LG4G19200 Aethionema arabicum HOM05D001544 ORTHO05D005712 6.4e-33 145.2 206 42.2
BcaC06g33056 Brassica carinata HOM05D001544 ORTHO05D005712 1.1e-32 144.4 196 43.4
A03p48120 Brassica napus HOM05D001544 ORTHO05D005712 1.1e-32 144.4 196 43.4
C07p46160 Brassica napus HOM05D001544 ORTHO05D005712 1.1e-32 144.4 196 43.4
BolC7t45132H Brassica oleracea HOM05D001544 ORTHO05D005712 1.1e-32 144.4 196 43.4
BraA03t13919Z Brassica rapa HOM05D001544 ORTHO05D005712 1.1e-32 144.4 196 43.4
RcHm_v2.0_Chr6g0267511 Rosa chinensis HOM05D001544 ORTHO05D005712 1.1e-32 144.4 225 41.8
FAN15G2093 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.4e-32 143.3 208 42.3
AL5G31520 Arabidopsis lyrata HOM05D001544 ORTHO05D005712 3.2e-32 142.9 233 39.1
THA.LOC104821318 Tarenaya hassleriana HOM05D001544 ORTHO05D005712 3.2e-32 142.9 224 38.8
CiPaw.07G055800 Carya illinoinensis HOM05D001544 ORTHO05D005712 4.2e-32 142.5 230 40.4
Thhalv10010713m.g Eutrema salsugineum HOM05D001544 ORTHO05D005712 4.2e-32 142.5 236 40.3
RcHm_v2.0_Chr2g0099951 Rosa chinensis HOM05D001544 ORTHO05D005712 1.6e-31 140.6 220 41.8
unitig_0.g2167 Utricularia gibba HOM05D001544 ORTHO05D005712 2.7e-31 139.8 194 38.7
Lj4A214G24 Lonicera japonica HOM05D001544 ORTHO05D005712 3.5e-31 139.4 104 63.5
VMungo1127G0458 Vigna mungo HOM05D001544 ORTHO05D005712 4.6e-31 139.0 200 41.0
Zm00001eb227920 Zea mays HOM05D001544 ORTHO05D005712 6.0e-31 138.7 199 39.7
Cc07_g10380 Coffea canephora HOM05D001544 ORTHO05D005712 1.3e-30 137.5 192 42.7
Dinv33599 Davidia involucrata HOM05D001544 ORTHO05D005712 2.3e-30 136.7 127 54.3
Lj3g0002354 Lotus japonicus HOM05D001544 ORTHO05D005712 2.5e-29 133.3 193 42.0
Thecc.01G023700 Theobroma cacao HOM05D001544 ORTHO05D005712 9.6e-29 131.3 178 42.7
HPP92_022282 Vanilla planifolia HOM05D001544 ORTHO05D005712 1.3e-28 131.0 105 61.0
EL10As8g23856 Beta vulgaris HOM05D001544 ORTHO05D005712 4.8e-28 129.0 311 34.7
Oeu037732.1 Olea europaea HOM05D001544 ORTHO05D005712 8.1e-28 128.3 154 47.4
Dinv23461 Davidia involucrata HOM05D001544 ORTHO05D005712 1.1e-27 127.9 128 53.9
arahy.Tifrunner.gnm1.ann1.3TM7ML Arachis hypogaea HOM05D001544 ORTHO05D005712 1.4e-27 127.5 117 52.1
THA.LOC104826761 Tarenaya hassleriana HOM05D001544 ORTHO05D005712 3.1e-27 126.3 217 36.4
Lalb_Chr19g0138931 Lupinus albus HOM05D001544 ORTHO05D005712 4.5e-26 122.5 119 48.7
arahy.Tifrunner.gnm1.ann1.N6BS4T Arachis hypogaea HOM05D001544 ORTHO05D005712 1.7e-25 120.6 99 57.6
PSO170G3698 Papaver somniferum HOM05D001544 ORTHO05D005712 1.7e-25 120.6 101 54.5
Zm00001eb103400 Zea mays HOM05D001544 ORTHO05D005712 4.9e-25 119.0 222 36.0
MBI14_g19731_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 1.1e-24 117.9 198 39.9
Cfa006938 Carpinus fangiana HOM05D001544 ORTHO05D005712 3.2e-24 116.3 161 41.6
FAN28G0278 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.1e-23 113.6 202 37.1
FAN23G1654 Fragaria x ananassa HOM05D002906 ORTHO05D003211 7.9e-23 111.7 202 36.6
FAN26G2191 Fragaria x ananassa HOM05D001544 ORTHO05D005712 7.9e-23 111.7 202 36.6
Gohir.D11G185900 Gossypium hirsutum HOM05D001544 ORTHO05D005712 7.9e-23 111.7 226 33.2
Gohir.A11G178100 Gossypium hirsutum HOM05D001544 ORTHO05D005712 1.3e-22 110.9 223 32.7
Gorai.007G197500 Gossypium raimondii HOM05D001544 ORTHO05D005712 1.8e-22 110.5 223 33.2
CDE12G0819 Ceratophyllum demersum HOM05D001544 ORTHO05D002732 3.0e-22 109.8 189 38.6
SMO361G0705 Selaginella moellendorffii HOM05D001544 ORTHO05D005712 1.1e-21 107.8 195 37.9
SMO004G0024 Selaginella moellendorffii HOM05D001544 ORTHO05D005712 5.6e-21 105.5 200 37.5
Mapoly0074s0044 Marchantia polymorpha HOM05D001544 ORTHO05D005712 2.1e-20 103.6 214 33.6
Ca_19707_v3 Cicer arietinum L. HOM05D001544 ORTHO05D005712 3.7e-20 102.8 170 38.8
Sabra05G0096400 Salix brachista HOM05D001544 ORTHO05D005712 1.8e-19 100.5 221 33.0
MBI14_g19737_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 9.0e-19 98.2 75 61.3
Os09g0530700 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 2.0e-18 97.1 98 48.0
FvH4_1g12190 Fragaria vesca HOM05D001544 ORTHO05D005712 6.5e-17 92.0 125 44.8
AagrBONN_evm.TU.Sc2ySwM_362.490 Anthoceros agrestis HOM05D001544 ORTHO05D005712 1.9e-16 90.5 124 41.1
Dinv42006 Davidia involucrata HOM05D001544 ORTHO05D002732 5.5e-16 89.0 220 31.8
Pp3c26_11470 Physcomitrium patens HOM05D001544 ORTHO05D005712 9.3e-16 88.2 211 30.3
Sabra07G0013400 Salix brachista HOM05D001544 ORTHO05D005712 1.6e-15 87.4 312 26.6
TAR381G0232 Trochodendron aralioides HOM05D001544 ORTHO05D005712 7.9e-15 85.1 126 39.7
FAN23G2664 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.3e-14 83.6 109 45.9
Pp3c3_3130 Physcomitrium patens HOM05D001544 ORTHO05D005712 6.7e-14 82.0 207 28.5
Thecc.01G023500 Theobroma cacao HOM05D001544 ORTHO05D005712 1.9e-13 80.5 155 33.5
CARHR160680 Cardamine hirsuta HOM05D001544 ORTHO05D005712 7.4e-13 78.6 203 31.5
Actinidia23006 Actinidia chinensis HOM05D001544 ORTHO05D005712 6.3e-12 75.5 58 63.8
Pp3c14_16330 Physcomitrium patens HOM05D001544 ORTHO05D005712 1.1e-11 74.7 226 30.1
CBR_g12214 Chara braunii HOM05D068249 ORTHO05D005712 1.4e-11 74.3 272 27.6
Zm00001eb319500 Zea mays HOM05D001544 ORTHO05D005712 3.1e-11 73.2 158 34.8
PSO675G0307 Papaver somniferum HOM05D001544 ORTHO05D005712 2.9e-09 66.6 123 36.6
TAR626G0405 Trochodendron aralioides HOM05D000010 ORTHO05D016350 1.1e-08 64.7 52 53.8
MBI14_g19736_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 3.2e-08 63.2 56 55.4
HPP92_028379 Vanilla planifolia HOM05D001544 ORTHO05D005712 7.9e-07 58.5 176 32.4
vmacro04031 Vaccinium macrocarpon HOM05D000804 ORTHO05D000989 5.1e-06 55.8 32 81.2


User provided reference genes

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