Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 3.2e-303 1044.3 524 100.0
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 1.3e-275 952.6 556 89.2
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 2.8e-214 748.8 425 84.5
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 1.2e-196 690.3 357 90.2
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 2.9e-195 685.6 357 89.6
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 2.5e-194 682.6 376 84.3
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 4.6e-193 678.3 363 85.7
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 7.9e-193 677.6 357 88.0
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 1.3e-192 676.8 357 87.7
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 1.8e-192 676.4 363 86.2
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 5.1e-192 674.9 357 88.8
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 6.7e-192 674.5 357 86.8
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 1.5e-191 673.3 357 87.4
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 1.5e-191 673.3 359 86.9
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 1.9e-191 672.9 357 87.7
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 5.7e-191 671.4 395 80.0
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 9.6e-191 670.6 357 87.1
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 2.1e-190 669.5 357 87.1
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 2.8e-190 669.1 356 87.6
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 3.7e-190 668.7 357 87.4
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 8.2e-190 667.5 363 85.7
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 1.4e-189 666.8 368 85.6
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 6.9e-189 664.5 357 85.4
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 2.0e-188 662.9 363 84.3
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 2.6e-188 662.5 410 79.0
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 5.9e-188 661.4 357 87.4
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 7.6e-188 661.0 357 86.8
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 1.3e-187 660.2 367 83.4
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 2.2e-187 659.4 357 84.9
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 2.2e-187 659.4 358 85.8
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 3.8e-187 658.7 357 86.8
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 3.8e-187 658.7 357 86.3
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 3.8e-187 658.7 357 85.4
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 5.0e-187 658.3 358 85.5
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 8.5e-187 657.5 358 85.2
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 8.5e-187 657.5 358 85.2
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 1.4e-186 656.8 358 84.6
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 2.5e-186 656.0 357 84.6
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 3.2e-186 655.6 358 85.2
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 3.2e-186 655.6 357 85.4
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 3.2e-186 655.6 357 84.3
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 4.2e-186 655.2 357 84.9
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 4.2e-186 655.2 411 77.6
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 9.3e-186 654.1 358 84.1
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 9.3e-186 654.1 357 84.9
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 2.1e-185 652.9 358 84.9
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 4.6e-185 651.7 357 85.2
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 4.6e-185 651.7 357 84.0
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 4.6e-185 651.7 357 84.9
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 4.6e-185 651.7 387 80.4
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 6.1e-185 651.4 356 84.6
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 7.9e-185 651.0 357 85.4
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 7.9e-185 651.0 357 85.2
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 7.9e-185 651.0 357 84.9
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 7.9e-185 651.0 357 84.9
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 2.3e-184 649.4 357 86.0
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 3.9e-184 648.7 357 85.2
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 5.1e-184 648.3 374 83.2
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 8.7e-184 647.5 357 83.8
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 8.7e-184 647.5 357 85.4
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 2.5e-183 646.0 357 83.8
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 2.5e-183 646.0 357 85.2
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 4.3e-183 645.2 358 83.5
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 5.7e-183 644.8 357 84.0
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 9.7e-183 644.0 357 84.6
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 2.2e-182 642.9 357 82.9
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 2.2e-182 642.9 357 84.0
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 4.8e-182 641.7 358 83.5
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 6.3e-182 641.3 363 82.1
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 1.4e-181 640.2 363 82.9
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 1.4e-181 640.2 357 84.6
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 1.8e-181 639.8 357 83.5
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 2.6e-180 636.0 357 82.1
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 7.7e-180 634.4 388 78.1
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 1.3e-179 633.6 357 81.5
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 3.8e-179 632.1 357 81.5
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 5.0e-179 631.7 357 81.8
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 8.5e-179 630.9 357 82.1
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 8.5e-179 630.9 356 81.7
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 8.5e-179 630.9 356 81.7
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 1.9e-178 629.8 358 82.4
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 4.2e-178 628.6 387 77.5
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.8e-176 623.2 373 79.4
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 3.0e-176 622.5 398 74.4
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 3.9e-176 622.1 357 81.2
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 1.1e-175 620.5 357 81.2
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 1.1e-175 620.5 357 81.2
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 9.7e-175 617.5 388 75.5
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.2e-174 616.3 357 81.0
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 2.2e-174 616.3 359 80.2
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 1.1e-173 614.0 409 72.9
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.4e-173 612.8 356 80.3
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 4.1e-173 612.1 357 80.1
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 9.1e-173 610.9 383 76.0
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 2.0e-172 609.8 383 75.7
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 2.6e-172 609.4 357 79.6
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 3.4e-172 609.0 357 79.6
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 3.4e-172 609.0 373 77.2
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 5.9e-172 608.2 360 80.6
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 5.5e-170 601.7 357 77.6
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 1.2e-169 600.5 357 78.4
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 5.7e-167 591.7 374 77.5
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 5.7e-167 591.7 357 78.2
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 3.0e-160 569.3 358 75.7
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 2.0e-159 566.6 365 75.9
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 9.1e-157 557.8 290 88.3
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 4.2e-154 548.9 291 87.6
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 4.2e-154 548.9 357 74.8
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 1.2e-153 547.4 364 69.5
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 6.1e-153 545.0 363 72.7
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.4e-152 543.9 291 86.9
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 7.5e-151 538.1 295 83.1
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 7.0e-149 531.6 361 67.6
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 9.1e-149 531.2 365 69.0
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 4.5e-148 528.9 361 67.9
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 9.5e-146 521.2 363 69.1
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 8.8e-144 514.6 331 73.4
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 9.8e-135 484.6 369 62.6
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 6.8e-128 461.8 360 61.4
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 3.6e-113 412.9 227 84.1
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 9.6e-98 361.7 193 85.5
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 4.5e-95 352.8 246 65.9
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 5.8e-87 325.9 171 86.5
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 9.3e-85 318.5 172 83.7
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 5.5e-77 292.7 199 73.9
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 9.3e-77 292.0 357 47.9
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 3.1e-72 276.9 146 86.3
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 8.5e-70 268.9 208 62.5
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 2.3e-67 260.8 363 40.8
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 6.5e-62 242.7 129 82.9
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 5.3e-56 223.0 138 75.4
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 9.4e-53 212.2 158 62.7
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 5.7e-42 176.4 195 50.8
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 1.9e-21 108.2 202 38.6
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 5.6e-21 106.7 53 90.6
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 5.6e-13 80.1 243 27.2
COL.COLO4_32114 Corchorus olitorius HOM05D000931 ORTHO05D002226 1.7e-06 58.5 44 61.4


User provided reference genes

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