Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22084 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 3.2e-262 907.9 471 100.0
vmacro23494 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 2.0e-171 606.3 640 60.5
Rhsim08G0035000 Rhododendron simsii HOM05D007242 ORTHO05D009089 1.3e-74 284.6 436 47.9
Atru.chr3.510 Acer truncatum HOM05D007242 ORTHO05D009089 3.8e-69 266.5 436 44.7
HanXRQChr07g0193491 Helianthus annuus HOM05D007242 ORTHO05D009089 1.9e-65 254.2 416 43.0
CSS0024550 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 1.9e-60 237.7 290 49.0
GSVIVG01019029001 Vitis vinifera HOM05D007242 ORTHO05D009089 7.1e-60 235.7 433 42.7
Lj2A917T62 Lonicera japonica HOM05D007242 ORTHO05D009089 1.2e-59 235.0 437 41.6
Lj2C896T5 Lonicera japonica HOM05D007242 ORTHO05D009089 5.1e-58 229.6 450 40.7
arahy.Tifrunner.gnm1.ann1.YZC3AP Arachis hypogaea HOM05D007242 ORTHO05D009089 9.6e-57 225.3 418 41.4
Sabra05G0104300 Salix brachista HOM05D007242 ORTHO05D009089 2.8e-56 223.8 451 34.8
Ciclev10027297m.g Citrus clementina HOM05D007242 ORTHO05D009089 2.4e-55 220.7 439 40.8
Oeu038867.1 Olea europaea HOM05D007242 ORTHO05D009089 2.0e-54 217.6 433 40.4
arahy.Tifrunner.gnm1.ann1.79NCEV Arachis hypogaea HOM05D007242 ORTHO05D009089 3.8e-53 213.4 418 40.4
COL.COLO4_04840 Corchorus olitorius HOM05D007242 ORTHO05D009089 9.3e-52 208.8 361 39.1
Dinv26797 Davidia involucrata HOM05D007242 ORTHO05D009089 7.9e-51 205.7 282 46.5
MD15G1269300 Malus domestica HOM05D007242 ORTHO05D009089 2.5e-49 200.7 297 41.8
Glyma.05G246000 Glycine max HOM05D007242 ORTHO05D009089 2.8e-48 197.2 289 40.5
Potri.005G127500 Populus trichocarpa HOM05D007242 ORTHO05D009089 3.7e-48 196.8 420 37.6
CAN.G1204.3 Capsicum annuum HOM05D007242 ORTHO05D009089 1.1e-47 195.3 435 37.5
MD02G1154900 Malus domestica HOM05D007242 ORTHO05D009089 1.8e-47 194.5 320 40.3
A06p37220 Brassica napus HOM05D007242 ORTHO05D009089 2.0e-46 191.0 348 35.1
Nitab4.5_0008184g0020 Nicotiana tabacum HOM05D007242 ORTHO05D009089 4.5e-46 189.9 289 40.5
Medtr8g107230 Medicago truncatula HOM05D007242 ORTHO05D009089 7.7e-46 189.1 423 37.8
Prupe.7G148400 Prunus persica HOM05D007242 ORTHO05D009089 9.4e-44 182.2 280 41.1
VMungo0251G2211 Vigna mungo HOM05D007242 ORTHO05D009089 9.4e-44 182.2 282 40.1
Hma1.2p1_0939F.1_g239400 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 1.2e-43 181.8 274 41.6
Haze_18840 Corylus avellana HOM05D007242 ORTHO05D009089 4.6e-43 179.9 270 42.2
TPR.G15492 Trifolium pratense HOM05D007242 ORTHO05D009089 4.6e-43 179.9 285 40.7
MSTRG.2935 Avicennia marina HOM05D007242 ORTHO05D009089 1.4e-42 178.3 268 41.8
TAR381G0682 Trochodendron aralioides HOM05D007242 ORTHO05D009089 2.3e-42 177.6 259 42.1
ClCG02G013250 Citrullus lanatus HOM05D007242 ORTHO05D009089 3.9e-42 176.8 422 36.0
HanXRQChr14g0431951 Helianthus annuus HOM05D007242 ORTHO05D009089 6.7e-42 176.0 420 35.5
Duzib264G0124 Durio zibethinus HOM05D007242 ORTHO05D009089 8.8e-42 175.6 280 40.4
CiPaw.15G142800 Carya illinoinensis HOM05D007242 ORTHO05D009089 2.0e-41 174.5 275 41.5
Peaxi162Scf00075g00618 Petunia axillaris HOM05D007242 ORTHO05D009089 2.5e-41 174.1 277 40.1
Thecc.01G042000 Theobroma cacao HOM05D007242 ORTHO05D009089 2.5e-41 174.1 276 40.2
Hma1.2p1_0268F.1_g107710 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 1.7e-40 171.4 268 41.8
Psat4g001600 Pisum sativum HOM05D007242 ORTHO05D009089 2.8e-40 170.6 285 37.2
BraA06t26646Z Brassica rapa HOM05D007242 ORTHO05D009089 3.7e-40 170.2 336 33.6
SGA_v2.0_scaffold204G41644 Striga asiatica HOM05D007242 ORTHO05D009089 3.7e-40 170.2 274 39.4
Manes.13G136000 Manihot esculenta HOM05D007242 ORTHO05D009089 8.2e-40 169.1 271 39.5
Phvul.002G329700 Phaseolus vulgaris HOM05D007242 ORTHO05D009089 3.1e-39 167.2 275 38.5
QL12p024714 Quercus lobata HOM05D007242 ORTHO05D009089 3.1e-39 167.2 270 40.4
DCAR_026265 Daucus carota HOM05D007242 ORTHO05D009089 4.1e-39 166.8 275 40.7
Gohir.A11G044400 Gossypium hirsutum HOM05D007242 ORTHO05D009089 9.1e-39 165.6 274 39.1
CANSAT35G0651 Cannabis sativa HOM05D007242 ORTHO05D009089 1.2e-38 165.2 269 40.9
Gorai.007G051500 Gossypium raimondii HOM05D007242 ORTHO05D009089 1.2e-38 165.2 260 39.6
Lalb_Chr05g0221691 Lupinus albus HOM05D007242 ORTHO05D009089 2.6e-38 164.1 280 37.9
Sp2g12820 Schrenkiella parvula HOM05D007242 ORTHO05D009089 2.6e-38 164.1 434 34.1
TWI53G0783 Tripterygium wilfordii HOM05D007242 ORTHO05D009089 1.3e-37 161.8 253 40.7
CARHR143900 Cardamine hirsuta HOM05D007242 ORTHO05D009089 1.7e-37 161.4 294 34.7
Migut.H00525 Erythranthe guttata HOM05D007242 ORTHO05D009089 1.7e-37 161.4 264 38.6
Sed0022143 Sechium edule HOM05D007242 ORTHO05D009089 2.9e-37 160.6 421 33.7
BcaC06g34194 Brassica carinata HOM05D007242 ORTHO05D009089 5.0e-37 159.8 297 34.3
CsaV3_2G017430 Cucumis sativus L. HOM05D007242 ORTHO05D009089 6.5e-37 159.5 422 34.4
A06p44470 Brassica napus HOM05D007242 ORTHO05D009089 8.5e-37 159.1 288 34.4
BraA06t27320Z Brassica rapa HOM05D007242 ORTHO05D009089 8.5e-37 159.1 288 34.4
MELO3C020940.2 Cucumis melo HOM05D007242 ORTHO05D009089 1.1e-36 158.7 438 33.6
BcaC06g31314 Brassica carinata HOM05D007242 ORTHO05D009089 4.2e-36 156.8 294 33.7
C07p31760 Brassica napus HOM05D007242 ORTHO05D009089 5.5e-36 156.4 295 33.9
BolC7t43717H Brassica oleracea HOM05D007242 ORTHO05D009089 5.5e-36 156.4 295 33.9
Thhalv10000833m.g Eutrema salsugineum HOM05D007242 ORTHO05D009089 5.5e-36 156.4 291 35.7
Nitab4.5_0010783g0030 Nicotiana tabacum HOM05D007242 ORTHO05D009089 9.4e-36 155.6 264 38.6
Peaxi162Scf00075g00617 Petunia axillaris HOM05D007242 ORTHO05D009089 9.4e-36 155.6 264 38.6
SalBow1G2223 Salvia bowleyana HOM05D007242 ORTHO05D009089 9.4e-36 155.6 397 35.5
Aa31LG2G8550 Aethionema arabicum HOM05D007242 ORTHO05D009089 1.2e-35 155.2 286 36.4
ECA246G4655 Erigeron canadensis HOM05D007242 ORTHO05D009089 1.2e-35 155.2 404 33.4
PGR102G1679 Punica granatum HOM05D007242 ORTHO05D009089 1.2e-35 155.2 270 36.3
AL5G10350 Arabidopsis lyrata HOM05D007242 ORTHO05D009089 2.1e-35 154.5 289 35.6
Carub.0005s0035 Capsella rubella HOM05D007242 ORTHO05D009089 3.6e-35 153.7 293 34.5
Sopen01g004000 Solanum pennellii HOM05D007242 ORTHO05D009089 1.8e-34 151.4 263 37.3
Eucgr.B03084 Eucalyptus grandis HOM05D007242 ORTHO05D009089 2.3e-34 151.0 290 35.9
Cc07_g05120 Coffea canephora HOM05D007242 ORTHO05D009089 2.0e-33 147.9 258 38.8
Lsat_1_v5_gn_2_38041 Lactuca sativa HOM05D007242 ORTHO05D009089 5.7e-33 146.4 165 48.5
Solyc01g008480.4 Solanum lycopersicum HOM05D007242 ORTHO05D009089 5.7e-33 146.4 263 36.9
AT2G01390 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 7.4e-33 146.0 285 34.7
Hund14133 Selenicereus undatus HOM05D007242 ORTHO05D009089 1.7e-32 144.8 269 35.3
THA.LOC104819810 Tarenaya hassleriana HOM05D007242 ORTHO05D009089 1.7e-32 144.8 281 33.8
MBI16_g13145_MAGBIO Magnolia biondii HOM05D007242 ORTHO05D009089 2.4e-31 141.0 258 35.7
Nn1g05103 Nelumbo nucifera HOM05D007242 ORTHO05D009089 9.1e-31 139.0 254 37.0
Glyma.08G053933 Glycine max HOM05D007242 ORTHO05D009089 1.3e-29 135.2 168 44.0
Aqoxy6G01016 Aquilegia oxysepala HOM05D007242 ORTHO05D009089 2.2e-29 134.4 277 33.2
EL10Ac6g14891 Beta vulgaris HOM05D007242 ORTHO05D009089 1.7e-24 118.2 258 32.2
AUR62003202 Chenopodium quinoa HOM05D007242 ORTHO05D009089 2.2e-24 117.9 253 33.6
HPP92_006079 Vanilla planifolia HOM05D007242 ORTHO05D009089 8.2e-24 115.9 197 34.5
Os10g0358700 Oryza sativa ssp. japonica HOM05D007242 ORTHO05D009089 2.0e-22 111.3 253 31.2
AUR62008019 Chenopodium quinoa HOM05D007242 ORTHO05D009089 5.9e-22 109.8 262 32.4
Zm00001eb288630 Zea mays HOM05D007242 ORTHO05D009089 6.1e-19 99.8 250 29.2
ATR0767G228 Amborella trichopoda HOM05D007242 ORTHO05D009089 8.0e-19 99.4 261 30.3
Lj4C132T2 Lonicera japonica HOM05D007242 ORTHO05D009089 5.4e-15 86.7 77 57.1
MD00G1058400 Malus domestica HOM05D007242 ORTHO05D009089 5.4e-15 86.7 52 75.0
AT2G01360 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 1.6e-14 85.1 151 35.1
Atru.chr3.508 Acer truncatum HOM05D007242 ORTHO05D009089 1.0e-13 82.4 126 42.9
Atru.chr3.509 Acer truncatum HOM05D007242 ORTHO05D009089 1.3e-13 82.0 112 41.1
CSS0006147 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 2.7e-11 74.3 168 33.3
BcaC06g34182 Brassica carinata HOM05D007242 ORTHO05D009089 6.1e-11 73.2 92 41.3
BcaB08g34298 Brassica carinata HOM05D007242 ORTHO05D009089 1.7e-08 65.1 110 38.2
Gohir.D11G047900 Gossypium hirsutum HOM05D007242 ORTHO05D009089 1.8e-07 61.6 125 33.6
HanXRQChr14g0431911 Helianthus annuus HOM05D007242 ORTHO05D009089 1.8e-07 61.6 35 77.1


User provided reference genes

Program Settings