Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro22053 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 5.6e-281 970.3 498 100.0
Rhsim03G0008000 Rhododendron simsii HOM05D008239 ORTHO05D009800 2.4e-66 257.3 472 40.0
Rhsim13G0234400 Rhododendron simsii HOM05D008239 ORTHO05D009800 3.3e-47 193.7 281 46.3
Rhsim06G0198100 Rhododendron simsii HOM05D008239 ORTHO05D009800 4.3e-39 166.8 490 32.9
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 2.0e-36 157.9 419 32.7
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 9.9e-36 155.6 384 31.8
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-34 151.8 292 36.6
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 7.9e-33 146.0 296 33.1
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 8.1e-30 136.0 261 36.8
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 7.6e-28 129.4 323 30.7
Dinv23282 Davidia involucrata HOM05D008239 ORTHO05D009800 1.7e-27 128.3 302 31.8
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 1.7e-27 128.3 340 29.4
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 8.4e-27 125.9 315 31.7
Rhsim03G0097700 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.6e-25 121.7 286 35.7
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 7.9e-25 119.4 464 25.2
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 3.0e-24 117.5 249 32.9
Dinv04006 Davidia involucrata HOM05D008239 ORTHO05D009800 5.1e-24 116.7 203 36.5
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 1.9e-23 114.8 290 31.7
Dinv41180 Davidia involucrata HOM05D008239 ORTHO05D009800 1.9e-23 114.8 292 28.4
CSS0028968 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 5.6e-23 113.2 141 51.8
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 9.6e-23 112.5 352 26.4
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 4.0e-21 107.1 339 28.9
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 6.5e-19 99.8 380 25.8
Dinv27633 Davidia involucrata HOM05D008239 ORTHO05D009800 6.5e-19 99.8 168 36.9
Dinv30486 Davidia involucrata HOM05D010983 ORTHO05D009800 4.2e-18 97.1 308 25.0
Dinv41765 Davidia involucrata HOM05D008239 ORTHO05D009800 4.2e-18 97.1 499 25.5
Dinv07268 Davidia involucrata HOM05D008239 ORTHO05D009800 5.5e-18 96.7 340 26.2
COL.COLO4_17209 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.6e-17 95.1 353 26.6
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.1e-17 94.7 292 28.8
COL.COLO4_04045 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.3e-16 92.0 293 29.7
Dinv42358 Davidia involucrata HOM05D008239 ORTHO05D009800 1.3e-16 92.0 406 27.1
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 3.0e-16 90.9 316 25.0
Os05g0124000 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 5.1e-16 90.1 358 24.3
COL.COLO4_17217 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.5e-15 88.6 353 25.8
Os05g0124600 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 9.6e-15 85.9 411 24.3
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 2.1e-14 84.7 322 25.5
Cc02_g10120 Coffea canephora HOM05D008239 ORTHO05D009800 1.4e-13 82.0 180 32.8
Dinv42361 Davidia involucrata HOM05D008239 ORTHO05D009800 3.1e-13 80.9 248 29.0
Cc02_g10150 Coffea canephora HOM05D008239 ORTHO05D009800 6.9e-13 79.7 175 32.6
Os07g0515900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 5.9e-12 76.6 273 28.2
Dinv25441 Davidia involucrata HOM05D008239 ORTHO05D009800 1.3e-11 75.5 206 27.7
COL.COLO4_19875 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.7e-11 75.1 219 31.5
Os07g0515700 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 6.5e-11 73.2 269 27.1
Os12g0118800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 8.5e-11 72.8 303 23.1
PGR142G1798 Punica granatum HOM05D007472 ORTHO05D009477 8.5e-11 72.8 206 26.7
TWI60G0556 Tripterygium wilfordii HOM05D007472 ORTHO05D009477 1.4e-10 72.0 205 26.3
Zm00001eb205000 Zea mays HOM05D013330 ORTHO05D009800 2.5e-10 71.2 335 24.5
Cfa007540 Carpinus fangiana HOM05D007472 ORTHO05D009477 3.2e-10 70.9 180 26.7
Sp2g17510 Schrenkiella parvula HOM05D007472 ORTHO05D009477 4.2e-10 70.5 294 23.8
Rhsim04G0073200 Rhododendron simsii HOM05D059364 ORTHO05D009800 5.5e-10 70.1 165 35.2
TAR622G0243 Trochodendron aralioides HOM05D007472 ORTHO05D009477 5.5e-10 70.1 201 27.4
COL.COLO4_12090 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.2e-09 68.9 206 28.2
Manes.01G090001 Manihot esculenta HOM05D007472 ORTHO05D009477 1.6e-09 68.6 180 26.7
DCAR_023499 Daucus carota HOM05D008239 ORTHO05D009800 2.1e-09 68.2 180 27.8
MBI14_g12118_MAGBIO Magnolia biondii HOM05D007472 ORTHO05D009477 2.7e-09 67.8 194 29.4
Dinv41768 Davidia involucrata HOM05D018862 ORTHO05D009800 4.6e-09 67.0 320 24.1
Rhsim03G0009800 Rhododendron simsii HOM05D008239 ORTHO05D009800 4.6e-09 67.0 165 33.3
THA.LOC104805462 Tarenaya hassleriana HOM05D007472 ORTHO05D009477 4.6e-09 67.0 253 25.7
Os11g0219400 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 6.1e-09 66.6 266 22.9
Potri.004G129100 Populus trichocarpa HOM05D007472 ORTHO05D009477 6.1e-09 66.6 222 24.8
Haze_14546 Corylus avellana HOM05D007472 ORTHO05D009477 7.9e-09 66.2 180 26.1
Os12g0572800 Oryza sativa ssp. japonica HOM05D007472 ORTHO05D009477 1.8e-08 65.1 207 28.5
FAN05G4432 Fragaria x ananassa HOM05D007472 ORTHO05D009477 2.3e-08 64.7 201 25.9
Aa31LG2G4320 Aethionema arabicum HOM05D007472 ORTHO05D009477 3.9e-08 63.9 178 27.0
Rhsim06G0198200 Rhododendron simsii HOM05D001108 ORTHO05D009800 5.1e-08 63.5 167 32.9
COL.COLO4_12089 Corchorus olitorius HOM05D008239 ORTHO05D009800 6.7e-08 63.2 321 25.2
Carub.0005s0743 Capsella rubella HOM05D007472 ORTHO05D009477 8.7e-08 62.8 178 27.0
Cc00_g27060 Coffea canephora HOM05D008239 ORTHO05D009800 8.7e-08 62.8 167 31.1
FAN02G3469 Fragaria x ananassa HOM05D007472 ORTHO05D009477 8.7e-08 62.8 201 24.9
Thhalv10009510m.g Eutrema salsugineum HOM05D007472 ORTHO05D009477 1.5e-07 62.0 261 26.1
Os01g0942900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.5e-07 62.0 255 27.1
FvH4_6g48800 Fragaria vesca HOM05D007472 ORTHO05D009477 1.9e-07 61.6 201 24.9
FAN09G3065 Fragaria x ananassa HOM05D007472 ORTHO05D009477 1.9e-07 61.6 201 24.9
Os10g0102200 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.9e-07 61.6 178 28.7
Aqoxy1G01920 Aquilegia oxysepala HOM05D007472 ORTHO05D009477 4.3e-07 60.5 231 25.5
BcaB07g30111 Brassica carinata HOM05D007472 ORTHO05D009477 4.3e-07 60.5 172 27.3
Os01g0943800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.3e-07 60.5 255 27.1
A02p36140 Brassica napus HOM05D007472 ORTHO05D009477 5.7e-07 60.1 280 24.3
BraA02t08613Z Brassica rapa HOM05D007472 ORTHO05D009477 5.7e-07 60.1 280 24.3
AL5G18670 Arabidopsis lyrata HOM05D007472 ORTHO05D009477 7.4e-07 59.7 178 27.5
FvH4_1g02370 Fragaria vesca HOM05D007472 ORTHO05D009477 7.4e-07 59.7 209 23.9
QL04p014554 Quercus lobata HOM05D007472 ORTHO05D009477 7.4e-07 59.7 251 24.7
QL04p014916 Quercus lobata HOM05D007472 ORTHO05D009477 7.4e-07 59.7 251 24.7
BcaC03g17537 Brassica carinata HOM05D007472 ORTHO05D009477 1.6e-06 58.5 172 26.7
BolC2t11563H Brassica oleracea HOM05D007472 ORTHO05D009477 1.6e-06 58.5 172 26.7
AUR62020015 Chenopodium quinoa HOM05D023548 ORTHO05D009800 1.6e-06 58.5 198 30.8
SHI06832 Sapria himalayana HOM05D007472 ORTHO05D000001 1.6e-06 58.5 203 24.1
Thecc.04G080300 Theobroma cacao HOM05D007472 ORTHO05D009477 1.6e-06 58.5 257 25.7
CARHR151910 Cardamine hirsuta HOM05D007472 ORTHO05D009477 2.2e-06 58.2 179 27.9
AUR62020016 Chenopodium quinoa HOM05D023548 ORTHO05D009800 3.7e-06 57.4 313 24.0
AUR62037189 Chenopodium quinoa HOM05D025186 ORTHO05D009800 3.7e-06 57.4 209 27.8
COL.COLO4_24278 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.7e-06 57.4 140 29.3
CSS0022853 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 4.8e-06 57.0 55 58.2
AUR62013259 Chenopodium quinoa HOM05D023548 ORTHO05D009800 4.8e-06 57.0 298 25.5
AUR62013258 Chenopodium quinoa HOM05D023548 ORTHO05D009800 6.3e-06 56.6 313 24.0
vmacro07904 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 6.3e-06 56.6 276 25.4


User provided reference genes

Program Settings