Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 2.1e-80 302.4 157 100.0
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 6.7e-55 217.6 129 85.3
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 1.2e-40 170.2 121 74.4
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 7.9e-40 167.5 129 70.5
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 8.2e-37 157.5 131 65.6
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 2.3e-31 139.4 138 59.4
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 4.0e-31 138.7 91 76.9
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 4.0e-31 138.7 91 76.9
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 1.3e-29 133.7 135 57.0
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 1.7e-29 133.3 131 55.7
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 1.1e-28 130.6 131 54.2
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 1.4e-28 130.2 132 53.8
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 1.4e-28 130.2 108 63.0
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 2.4e-28 129.4 129 54.3
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 4.1e-28 128.6 68 91.2
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 4.1e-28 128.6 127 57.5
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 9.1e-28 127.5 129 53.5
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 1.2e-27 127.1 105 64.8
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 1.6e-27 126.7 131 55.0
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 2.7e-27 125.9 143 53.1
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 2.7e-27 125.9 133 51.9
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 4.5e-27 125.2 69 82.6
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 5.9e-27 124.8 102 62.7
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 5.9e-27 124.8 102 62.7
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 1.0e-26 124.0 72 79.2
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 1.7e-26 123.2 132 57.6
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 1.7e-26 123.2 129 58.1
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 1.7e-26 123.2 69 81.2
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 1.7e-26 123.2 133 51.1
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 5.0e-26 121.7 129 54.3
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 6.5e-26 121.3 127 54.3
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 6.5e-26 121.3 102 61.8
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 8.5e-26 120.9 134 50.7
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.1e-25 120.6 133 49.6
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 1.5e-25 120.2 97 62.9
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.5e-25 119.4 69 79.7
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 2.5e-25 119.4 108 59.3
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 5.5e-25 118.2 135 52.6
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 5.5e-25 118.2 126 55.6
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 7.2e-25 117.9 126 54.0
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 1.2e-24 117.1 129 54.3
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 1.6e-24 116.7 136 50.0
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 1.6e-24 116.7 134 47.8
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.6e-24 116.7 108 57.4
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 1.6e-24 116.7 133 47.4
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 2.1e-24 116.3 93 66.7
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 2.7e-24 115.9 138 46.4
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 2.7e-24 115.9 131 54.2
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 8.0e-24 114.4 126 51.6
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 8.0e-24 114.4 66 81.8
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 8.0e-24 114.4 128 50.0
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 1.0e-23 114.0 133 51.9
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 1.0e-23 114.0 119 57.1
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 1.4e-23 113.6 131 49.6
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 1.4e-23 113.6 114 56.1
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.4e-23 113.6 125 51.2
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 2.3e-23 112.8 143 46.9
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 2.3e-23 112.8 143 46.9
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 3.0e-23 112.5 116 54.3
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 3.0e-23 112.5 72 75.0
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 3.0e-23 112.5 121 52.9
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 3.4e-22 109.0 69 72.5
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 4.4e-22 108.6 87 60.9
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 4.4e-22 108.6 69 73.9
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 4.4e-22 108.6 118 50.8
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 7.5e-22 107.8 127 49.6
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 9.8e-22 107.5 81 63.0
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 9.8e-22 107.5 99 55.6
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 1.3e-21 107.1 131 48.9
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 1.3e-21 107.1 129 48.1
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 1.7e-21 106.7 134 48.5
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 1.7e-21 106.7 124 50.8
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 1.7e-21 106.7 84 61.9
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 2.2e-21 106.3 132 47.7
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 3.7e-21 105.5 150 42.7
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 3.7e-21 105.5 119 48.7
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 3.7e-21 105.5 119 48.7
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 4.8e-21 105.1 71 70.4
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 4.8e-21 105.1 125 47.2
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 6.3e-21 104.8 97 54.6
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 8.3e-21 104.4 103 55.3
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 1.8e-20 103.2 102 55.9
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 2.4e-20 102.8 65 70.8
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 2.4e-20 102.8 108 50.9
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 3.1e-20 102.4 94 57.4
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 3.1e-20 102.4 94 57.4
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 3.1e-20 102.4 73 69.9
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 4.1e-20 102.1 97 54.6
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 7.0e-20 101.3 73 71.2
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 1.6e-19 100.1 94 57.4
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 1.6e-19 100.1 120 48.3
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 2.7e-19 99.4 80 63.8
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 4.5e-19 98.6 122 45.9
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 7.7e-19 97.8 81 61.7
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.0e-18 97.4 68 66.2
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 1.7e-18 96.7 61 75.4
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 1.7e-18 96.7 101 55.4
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 1.7e-18 96.7 82 58.5
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 1.7e-18 96.7 64 71.9
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 5.5e-17 91.7 70 70.0
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 5.5e-17 91.7 79 58.2
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.6e-16 90.1 114 47.4
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 1.0e-15 87.4 127 44.9
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 1.0e-15 87.4 127 44.9
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.0e-15 87.4 64 76.6
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 1.4e-15 87.0 92 52.2
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 1.8e-15 86.7 122 41.0
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 7.5e-14 81.3 66 59.1
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 2.4e-12 76.3 57 61.4


User provided reference genes

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