Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21856 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 6.4e-134 480.7 237 100.0
CSS0047191 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 3.0e-91 339.0 213 76.1
CSS0049889 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 1.5e-90 336.7 209 76.6
CSS0010771 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 2.0e-87 326.2 210 73.8
vmacro04376 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 1.2e-84 317.0 212 72.6
TAR381G0201 Trochodendron aralioides HOM05D000901 ORTHO05D004766 4.7e-84 315.1 221 68.8
Actinidia37946 Actinidia chinensis HOM05D000901 ORTHO05D004766 6.7e-83 311.2 220 65.5
Lj4A18T108 Lonicera japonica HOM05D000901 ORTHO05D004766 1.8e-80 303.1 211 67.3
Lj4A800T39 Lonicera japonica HOM05D000901 ORTHO05D004766 1.0e-78 297.4 223 63.2
Nitab4.5_0002730g0020 Nicotiana tabacum HOM05D000901 ORTHO05D004766 2.2e-78 296.2 213 65.3
Manes.05G143600 Manihot esculenta HOM05D000901 ORTHO05D004766 3.8e-78 295.4 224 63.8
Potri.005G244400 Populus trichocarpa HOM05D000901 ORTHO05D004766 9.4e-77 290.8 213 64.8
PSO063G0231 Papaver somniferum HOM05D000901 ORTHO05D004766 1.6e-76 290.0 219 64.4
GSVIVG01008758001 Vitis vinifera HOM05D000901 ORTHO05D004766 1.6e-76 290.0 215 65.1
Oeu048721.1 Olea europaea HOM05D000901 ORTHO05D004766 2.7e-76 289.3 198 67.2
Sabra05G0189000 Salix brachista HOM05D000901 ORTHO05D004766 1.0e-75 287.3 223 61.9
Nitab4.5_0001936g0050 Nicotiana tabacum HOM05D000901 ORTHO05D004766 3.0e-75 285.8 213 62.4
Aqoxy5G01833 Aquilegia oxysepala HOM05D000901 ORTHO05D004766 5.2e-75 285.0 216 64.8
Peaxi162Scf00289g00084 Petunia axillaris HOM05D000901 ORTHO05D004766 6.7e-75 284.6 218 61.5
COL.COLO4_26098 Corchorus olitorius HOM05D000901 ORTHO05D004766 1.5e-74 283.5 224 58.5
Gorai.010G001700 Gossypium raimondii HOM05D000901 ORTHO05D004766 2.6e-74 282.7 222 60.8
Thecc.08G049900 Theobroma cacao HOM05D000901 ORTHO05D004766 2.6e-74 282.7 220 62.3
EL10Ac1g02116 Beta vulgaris HOM05D000901 ORTHO05D004766 7.4e-74 281.2 220 61.4
Hund05158 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.3e-73 280.4 216 63.0
Hund05161 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.3e-73 280.4 216 63.0
CAN.G1517.1 Capsicum annuum HOM05D000901 ORTHO05D004766 2.8e-73 279.3 195 65.6
Duzib041G0373 Durio zibethinus HOM05D000901 ORTHO05D004766 2.8e-73 279.3 226 59.3
HanXRQChr06g0184521 Helianthus annuus HOM05D000901 ORTHO05D004766 2.8e-73 279.3 215 60.0
Peaxi162Scf00064g00828 Petunia axillaris HOM05D000901 ORTHO05D004766 3.7e-73 278.9 197 62.4
MBI05_g36763_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 4.8e-73 278.5 198 65.7
AUR62036698 Chenopodium quinoa HOM05D000901 ORTHO05D004766 8.2e-73 277.7 201 63.7
PSO782G4846 Papaver somniferum HOM05D000901 ORTHO05D004766 8.2e-73 277.7 212 63.2
Rhsim06G0013400 Rhododendron simsii HOM05D000901 ORTHO05D004766 8.2e-73 277.7 179 79.3
Sc15g0004710 Simmondsia chinensis HOM05D000901 ORTHO05D004766 8.2e-73 277.7 201 65.2
Nitab4.5_0000498g0060 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.1e-72 277.3 210 62.4
Cfa013996 Carpinus fangiana HOM05D000901 ORTHO05D004766 1.4e-72 276.9 218 58.7
DCAR_013891 Daucus carota HOM05D000901 ORTHO05D004766 3.1e-72 275.8 197 66.0
DCAR_013892 Daucus carota HOM05D000901 ORTHO05D004766 3.1e-72 275.8 204 62.7
Nn6g31933 Nelumbo nucifera HOM05D000901 ORTHO05D004766 3.1e-72 275.8 205 63.4
Solyc12g094380.2 Solanum lycopersicum HOM05D000901 ORTHO05D004766 3.1e-72 275.8 196 64.3
Thecc.08G050000 Theobroma cacao HOM05D000901 ORTHO05D004766 3.1e-72 275.8 225 59.6
Ciclev10002332m.g Citrus clementina HOM05D000901 ORTHO05D004766 1.6e-71 273.5 216 58.8
Eucgr.F03719 Eucalyptus grandis HOM05D000901 ORTHO05D004766 2.0e-71 273.1 217 60.4
Hund05157 Selenicereus undatus HOM05D000901 ORTHO05D004766 3.5e-71 272.3 219 60.3
Hund05162 Selenicereus undatus HOM05D000901 ORTHO05D004766 3.5e-71 272.3 219 60.3
Sopen12g031260 Solanum pennellii HOM05D000901 ORTHO05D004766 4.5e-71 271.9 220 60.0
FvH4_2g38030 Fragaria vesca HOM05D000901 ORTHO05D004766 7.7e-71 271.2 193 62.7
PGSC0003DMG400029329 Solanum tuberosum HOM05D000901 ORTHO05D004766 1.0e-70 270.8 217 59.0
CiPaw.07G144500 Carya illinoinensis HOM05D000901 ORTHO05D004766 1.7e-70 270.0 208 62.5
Hund01706 Selenicereus undatus HOM05D000901 ORTHO05D004766 2.2e-70 269.6 195 63.1
Ah.00g000720 Amaranthus hybridus HOM05D000901 ORTHO05D004766 8.5e-70 267.7 223 60.1
SGA_v2.0_scaffold145G36086 Striga asiatica HOM05D000901 ORTHO05D004766 8.5e-70 267.7 198 60.6
arahy.Tifrunner.gnm1.ann1.K685T3 Arachis hypogaea HOM05D000901 ORTHO05D004766 1.5e-69 266.9 189 62.4
Lalb_Chr11g0061781 Lupinus albus HOM05D000901 ORTHO05D004766 1.5e-69 266.9 200 59.0
MELO3C011351.2 Cucumis melo HOM05D000901 ORTHO05D004766 3.2e-69 265.8 222 54.1
arahy.Tifrunner.gnm1.ann1.774XMB Arachis hypogaea HOM05D000901 ORTHO05D004766 4.2e-69 265.4 189 62.4
Phvul.009G019200 Phaseolus vulgaris HOM05D000901 ORTHO05D004766 4.2e-69 265.4 193 61.7
Sed0006708 Sechium edule HOM05D000901 ORTHO05D004766 4.2e-69 265.4 210 58.1
VMungo1309G2869 Vigna mungo HOM05D002716 ORTHO05D003324 4.2e-69 265.4 206 61.7
Migut.C00891 Erythranthe guttata HOM05D000901 ORTHO05D004766 9.4e-69 264.2 198 60.1
Glyma.04G021400 Glycine max HOM05D000901 ORTHO05D004766 9.4e-69 264.2 219 57.1
Cpa.g.sc26.277 Carica papaya HOM05D000901 ORTHO05D004766 1.2e-68 263.8 208 57.2
ClCG08G014120 Citrullus lanatus HOM05D000901 ORTHO05D004766 1.2e-68 263.8 217 56.7
Potri.002G017500 Populus trichocarpa HOM05D000901 ORTHO05D004766 1.2e-68 263.8 207 63.8
HanXRQChr14g0429411 Helianthus annuus HOM05D000901 ORTHO05D004766 1.6e-68 263.5 215 58.6
FAN20G3106 Fragaria x ananassa HOM05D000901 ORTHO05D004766 2.1e-68 263.1 193 61.7
MD15G1007500 Malus domestica HOM05D000901 ORTHO05D004766 6.1e-68 261.5 221 55.7
BraA02t07071Z Brassica rapa HOM05D000901 ORTHO05D004766 8.0e-68 261.2 213 59.2
Glyma.04G021300 Glycine max HOM05D000901 ORTHO05D004766 8.0e-68 261.2 193 60.6
BcaC03g15640 Brassica carinata HOM05D000901 ORTHO05D004766 1.0e-67 260.8 211 60.2
BolC2t09354H Brassica oleracea HOM05D000901 ORTHO05D004766 1.0e-67 260.8 211 60.2
PGR031G2145 Punica granatum HOM05D000901 ORTHO05D004766 1.8e-67 260.0 215 57.2
TPR.G9568 Trifolium pratense HOM05D000901 ORTHO05D004766 1.8e-67 260.0 214 56.1
C02p33510 Brassica napus HOM05D000901 ORTHO05D004766 2.3e-67 259.6 211 59.7
CsaV3_2G024310 Cucumis sativus L. HOM05D000901 ORTHO05D004766 4.0e-67 258.8 222 53.6
RcHm_v2.0_Chr6g0303571 Rosa chinensis HOM05D000901 ORTHO05D004766 4.0e-67 258.8 193 60.6
CANSAT25G0446 Cannabis sativa HOM05D000901 ORTHO05D004766 6.8e-67 258.1 222 59.0
Prupe.1G360400 Prunus persica HOM05D000901 ORTHO05D004766 8.8e-67 257.7 217 58.5
A02p20390 Brassica napus HOM05D000901 ORTHO05D004766 1.2e-66 257.3 216 59.3
Lsat_1_v5_gn_2_7381 Lactuca sativa HOM05D000901 ORTHO05D004766 1.2e-66 257.3 209 56.9
MD08G1008700 Malus domestica HOM05D000901 ORTHO05D004766 1.5e-66 256.9 193 59.6
TWI56G0802 Tripterygium wilfordii HOM05D000901 ORTHO05D004766 1.5e-66 256.9 208 60.1
Ca_11598_v3 Cicer arietinum L. HOM05D000901 ORTHO05D004766 2.0e-66 256.5 204 58.3
ECA238G3494 Erigeron canadensis HOM05D000901 ORTHO05D004766 4.4e-66 255.4 199 58.8
Thhalv10019591m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 7.5e-66 254.6 197 61.4
Sp5g31130 Schrenkiella parvula HOM05D000901 ORTHO05D004766 7.5e-66 254.6 220 57.7
HPP92_022203 Vanilla planifolia HOM05D000901 ORTHO05D004766 7.5e-66 254.6 197 57.9
Eucgr.F01691 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.3e-65 253.8 205 60.5
Lj1g0003310 Lotus japonicus HOM05D000901 ORTHO05D004766 2.2e-65 253.1 194 59.8
ATR0661G262 Amborella trichopoda HOM05D000901 ORTHO05D004766 2.8e-65 252.7 226 54.9
Gohir.A06G001500 Gossypium hirsutum HOM05D000901 ORTHO05D004766 6.3e-65 251.5 179 64.8
AUR62013896 Chenopodium quinoa HOM05D000901 ORTHO05D004766 1.4e-64 250.4 216 56.9
Cc10_g01220 Coffea canephora HOM05D000901 ORTHO05D004766 1.4e-64 250.4 211 56.4
Medtr0332s0020 Medicago truncatula HOM05D000901 ORTHO05D004766 1.4e-64 250.4 194 58.2
QL02p012636 Quercus lobata HOM05D000901 ORTHO05D004766 5.3e-64 248.4 238 52.5
Sopen12g031250 Solanum pennellii HOM05D000901 ORTHO05D004766 9.1e-64 247.7 214 55.1
Nn5g30828 Nelumbo nucifera HOM05D000901 ORTHO05D004766 1.6e-63 246.9 200 56.5
SalBow7G4280 Salvia bowleyana HOM05D000901 ORTHO05D004766 2.0e-63 246.5 215 54.9
DCAR_025124 Daucus carota HOM05D000901 ORTHO05D004766 2.7e-63 246.1 211 55.5
AT1G76020 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 1.3e-62 243.8 207 56.5
MSTRG.1154 Avicennia marina HOM05D000901 ORTHO05D004766 1.3e-62 243.8 195 57.4
MSTRG.1155 Avicennia marina HOM05D000901 ORTHO05D004766 1.3e-62 243.8 195 56.9
A07p41510 Brassica napus HOM05D000901 ORTHO05D004766 1.3e-62 243.8 223 55.2
Os09g0542200 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 2.9e-62 242.7 202 59.4
PGR083G1908 Punica granatum HOM05D000901 ORTHO05D004766 5.0e-62 241.9 220 55.0
Psat7g082200 Pisum sativum HOM05D000901 ORTHO05D004766 1.1e-61 240.7 213 53.1
THA.LOC104813773 Tarenaya hassleriana HOM05D000901 ORTHO05D004766 1.1e-61 240.7 209 56.0
HPP92_025437 Vanilla planifolia HOM05D000901 ORTHO05D004766 2.5e-61 239.6 221 53.4
unitig_32.g11240 Utricularia gibba HOM05D000901 ORTHO05D004766 4.2e-61 238.8 223 52.0
Zm00001eb103900 Zea mays HOM05D000901 ORTHO05D004766 9.4e-61 237.7 216 55.6
CDE09G0289 Ceratophyllum demersum HOM05D000901 ORTHO05D004766 1.2e-60 237.3 209 54.1
Sp1g17990 Schrenkiella parvula HOM05D000901 ORTHO05D004766 1.2e-60 237.3 197 58.9
Carub.0002s2290 Capsella rubella HOM05D000901 ORTHO05D004766 2.1e-60 236.5 197 57.9
SEGI_34166 Sequoiadendron giganteum HOM05D000901 ORTHO05D004766 4.7e-60 235.3 196 54.1
BcaC08g47093 Brassica carinata HOM05D000901 ORTHO05D004766 6.1e-60 235.0 216 55.1
C06p49920 Brassica napus HOM05D000901 ORTHO05D004766 1.0e-59 234.2 223 53.4
AL1G33070 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 1.4e-59 233.8 219 54.3
Rhsim07G0249300 Rhododendron simsii HOM05D000901 ORTHO05D004766 1.8e-59 233.4 224 59.8
AT1G20225 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 2.3e-59 233.0 206 55.3
C05p18770 Brassica napus HOM05D000901 ORTHO05D004766 3.0e-59 232.6 202 55.4
BolC5t30582H Brassica oleracea HOM05D000901 ORTHO05D004766 4.0e-59 232.3 202 55.4
Carub.0001s1975 Capsella rubella HOM05D000901 ORTHO05D004766 4.0e-59 232.3 210 54.8
BraA06t24738Z Brassica rapa HOM05D000901 ORTHO05D004766 5.2e-59 231.9 212 53.8
BcaC08g47306 Brassica carinata HOM05D000901 ORTHO05D004766 1.2e-58 230.7 223 52.9
BcaC08g47307 Brassica carinata HOM05D000901 ORTHO05D004766 1.2e-58 230.7 223 52.9
A06p16340 Brassica napus HOM05D000901 ORTHO05D004766 2.6e-58 229.6 214 52.8
Aa31LG4G6150 Aethionema arabicum HOM05D000901 ORTHO05D004766 5.7e-58 228.4 212 54.2
HPP92_026881 Vanilla planifolia HOM05D000901 ORTHO05D004766 5.7e-58 228.4 213 53.5
BcaC05g25925 Brassica carinata HOM05D000901 ORTHO05D004766 7.5e-58 228.0 196 56.1
CARHR069550 Cardamine hirsuta HOM05D000901 ORTHO05D004766 7.5e-58 228.0 212 55.2
BcaB07g32030 Brassica carinata HOM05D000901 ORTHO05D004766 1.3e-57 227.3 199 54.8
CARHR020720 Cardamine hirsuta HOM05D000901 ORTHO05D004766 2.2e-57 226.5 198 54.5
AL2G36040 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 4.8e-57 225.3 252 47.2
HPP92_003483 Vanilla planifolia HOM05D000901 ORTHO05D004766 4.8e-57 225.3 213 53.1
Os04g0227500 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 1.4e-56 223.8 212 49.1
BolC6t40030H Brassica oleracea HOM05D000901 ORTHO05D004766 4.1e-56 222.2 241 49.4
Actinidia29763 Actinidia chinensis HOM05D000901 ORTHO05D004766 7.0e-56 221.5 221 52.5
BraA07t31683Z Brassica rapa HOM05D000901 ORTHO05D004766 1.6e-55 220.3 242 48.3
Dinv31885 Davidia involucrata HOM05D000901 ORTHO05D001160 1.2e-52 210.7 135 74.1
Aa31LG7G4620 Aethionema arabicum HOM05D000901 ORTHO05D004766 4.7e-52 208.8 220 48.6
Nitab4.5_0010135g0010 Nicotiana tabacum HOM05D000901 ORTHO05D004766 8.9e-51 204.5 195 52.8
FAN27G1122 Fragaria x ananassa HOM05D000901 ORTHO05D001160 3.4e-50 202.6 153 60.8
SGA_v2.0_scaffold292G47381 Striga asiatica HOM05D000901 ORTHO05D004766 1.1e-48 197.6 187 51.9
SMO137G0357 Selaginella moellendorffii HOM05D000901 ORTHO05D004766 5.9e-47 191.8 219 46.1
MBI05_g08641_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 6.6e-46 188.3 134 67.2
Thhalv10010046m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 2.0e-42 176.8 156 56.4
Psat7g082240 Pisum sativum HOM05D000901 ORTHO05D004766 5.8e-42 175.3 136 58.8
Mapoly0103s0033 Marchantia polymorpha HOM05D000901 ORTHO05D004766 2.9e-41 172.9 209 45.5
Pp3c23_11410 Physcomitrium patens HOM05D000901 ORTHO05D004766 3.2e-40 169.5 195 44.1
Oeu048720.1 Olea europaea HOM05D000901 ORTHO05D004766 3.5e-39 166.0 101 74.3
MBI05_g19938_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 1.5e-37 160.6 121 63.6
BolC1t01801H Brassica oleracea HOM05D000901 ORTHO05D004766 4.9e-33 145.6 110 65.5
FAN15G2950 Fragaria x ananassa HOM05D000901 ORTHO05D001160 6.4e-33 145.2 153 47.7
Zm00001eb419520 Zea mays HOM05D000901 ORTHO05D004766 1.9e-32 143.7 122 53.3
MBI05_g47803_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 9.2e-32 141.4 154 49.4
Lj2g0002110 Lotus japonicus HOM05D000901 ORTHO05D004766 7.8e-31 138.3 139 49.6
MSTRG.25272 Avicennia marina HOM05D000901 ORTHO05D004766 1.3e-30 137.5 117 58.1
Eucgr.L01283 Eucalyptus grandis HOM05D000901 ORTHO05D004766 5.6e-29 132.1 114 55.3
Haze_22688 Corylus avellana HOM05D000901 ORTHO05D004766 8.9e-27 124.8 95 60.0
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 2.6e-26 123.2 107 54.2
AagrBONN_evm.TU.Sc2ySwM_228.1931 Anthoceros agrestis HOM05D000901 ORTHO05D004766 2.2e-25 120.2 150 42.0
CBR_g10910 Chara braunii HOM05D000901 ORTHO05D004766 1.4e-24 117.5 221 33.9
BcaC01g02788 Brassica carinata HOM05D000901 ORTHO05D004766 6.0e-23 112.1 117 48.7
C03p50790 Brassica napus HOM05D000901 ORTHO05D004766 7.8e-23 111.7 117 48.7
BolC6t40031H Brassica oleracea HOM05D000901 ORTHO05D004766 2.3e-22 110.2 139 43.2
AUR62036699 Chenopodium quinoa HOM05D000901 ORTHO05D004766 2.3e-22 110.2 107 49.5
BcaC09g50963 Brassica carinata HOM05D000901 ORTHO05D004766 3.0e-22 109.8 86 60.5
Rhsim07G0249200 Rhododendron simsii HOM05D000901 ORTHO05D004766 1.9e-21 107.1 94 58.5
CiPaw.07G144400 Carya illinoinensis HOM05D000901 ORTHO05D004766 4.3e-21 105.9 84 56.0
C07p15020 Brassica napus HOM05D000901 ORTHO05D004766 2.4e-19 100.1 108 48.1
Haze_22689 Corylus avellana HOM05D000901 ORTHO05D004766 3.4e-18 96.3 114 49.1
Ciclev10027478m.g Citrus clementina HOM05D000901 ORTHO05D004766 7.6e-18 95.1 85 50.6
BolC6t37476H Brassica oleracea HOM05D000901 ORTHO05D004766 2.9e-17 93.2 87 50.6
C03p60410 Brassica napus HOM05D000901 ORTHO05D004766 2.7e-15 86.7 92 47.8
Eucgr.H01097 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.7e-14 84.0 80 48.8
BolC3t18302H Brassica oleracea HOM05D000901 ORTHO05D004766 2.5e-13 80.1 84 47.6
BcaC09g50962 Brassica carinata HOM05D000901 ORTHO05D004766 2.8e-12 76.6 62 54.8


User provided reference genes

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