Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 9.3e-303 1042.7 524 100.0
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 2.1e-270 935.3 587 83.6
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 4.2e-263 911.0 603 79.9
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.3e-248 862.8 561 81.3
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 6.4e-227 790.8 592 70.6
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 2.0e-212 742.7 605 66.1
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 4.0e-197 691.8 610 62.5
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 1.0e-179 634.0 576 61.3
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 1.1e-170 604.0 600 56.2
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 2.1e-169 599.7 610 55.4
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 5.2e-168 595.1 598 56.0
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 9.7e-167 590.9 603 54.9
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 1.3e-166 590.5 599 54.6
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 2.2e-166 589.7 602 55.1
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 4.8e-166 588.6 609 54.4
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 8.2e-166 587.8 600 54.8
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 9.1e-165 584.3 592 53.7
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 7.7e-164 581.3 604 54.3
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 1.0e-163 580.9 596 55.5
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 1.3e-163 580.5 615 54.3
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 1.3e-163 580.5 596 54.9
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 1.7e-163 580.1 600 54.3
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 2.2e-163 579.7 601 54.2
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 6.5e-163 578.2 600 54.2
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 2.7e-161 572.8 602 53.7
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 3.6e-161 572.4 603 53.9
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 1.4e-160 570.5 599 53.3
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 3.0e-160 569.3 574 54.7
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 6.7e-160 568.2 604 53.1
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 1.2e-159 567.4 596 54.0
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 1.5e-159 567.0 604 52.5
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 1.5e-159 567.0 603 52.6
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 3.3e-159 565.8 589 53.1
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 9.7e-159 564.3 596 53.9
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 1.3e-158 563.9 603 53.1
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 4.1e-157 558.9 590 52.7
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 4.1e-157 558.9 598 53.3
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 5.3e-157 558.5 604 52.3
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 5.3e-157 558.5 604 52.3
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 4.5e-156 555.4 597 52.8
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 1.0e-155 554.3 591 53.8
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 3.8e-155 552.4 607 52.2
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 5.0e-155 552.0 606 52.0
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 6.5e-155 551.6 596 52.2
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 2.5e-154 549.7 640 51.4
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 4.2e-154 548.9 606 51.7
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 5.5e-154 548.5 601 51.6
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 1.2e-153 547.4 605 51.4
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 2.7e-153 546.2 596 53.0
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 4.0e-152 542.3 602 50.2
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 4.0e-152 542.3 607 51.4
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 8.8e-152 541.2 589 51.8
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 2.0e-151 540.0 599 51.8
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 2.6e-151 539.7 597 50.9
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 2.2e-150 536.6 588 51.2
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 2.2e-150 536.6 602 50.7
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 1.8e-149 533.5 610 49.5
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 1.2e-148 530.8 606 49.7
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 4.5e-148 528.9 596 50.3
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 6.5e-147 525.0 598 50.0
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 1.5e-146 523.9 610 48.5
FAN19G1851 Fragaria x ananassa HOM05D005709 ORTHO05D006306 9.5e-146 521.2 566 52.5
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 6.1e-145 518.5 594 50.5
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 8.0e-145 518.1 600 48.3
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 1.0e-144 517.7 591 50.8
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 3.0e-144 516.2 604 47.8
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 6.8e-144 515.0 608 48.7
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 2.2e-142 510.0 600 49.2
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 3.5e-140 502.7 590 47.5
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 3.5e-140 502.7 598 47.8
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 2.9e-139 499.6 602 47.7
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 5.0e-139 498.8 601 47.6
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 5.0e-139 498.8 590 47.1
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 6.6e-139 498.4 601 47.6
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 1.1e-138 497.7 591 47.5
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 2.8e-137 493.0 601 48.8
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 6.1e-137 491.9 597 47.7
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 8.0e-137 491.5 597 47.4
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 3.7e-134 482.6 542 51.5
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 3.2e-133 479.6 600 47.2
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 3.5e-132 476.1 556 51.1
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 3.9e-131 472.6 601 45.9
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 1.6e-129 467.2 594 47.0
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 6.2e-129 465.3 657 43.2
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 1.4e-128 464.2 599 44.7
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 6.8e-128 461.8 622 44.7
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 2.9e-126 456.4 599 44.6
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 1.1e-122 444.5 586 45.7
Phvul.002G146800 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 3.4e-119 433.0 475 50.1
GSVIVG01007131001 Vitis vinifera HOM05D005709 ORTHO05D006306 2.9e-118 429.9 423 54.1
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 3.3e-114 416.4 595 44.5
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 2.1e-113 413.7 304 74.0
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 4.0e-112 409.5 609 41.2
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 5.2e-112 409.1 622 41.3
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 9.9e-111 404.8 552 45.3
Sc03g0000380 Simmondsia chinensis HOM05D005709 ORTHO05D006306 4.9e-110 402.5 431 51.5
Lsat_1_v5_gn_2_70300 Lactuca sativa HOM05D005709 ORTHO05D006306 2.7e-108 396.7 446 50.0
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 1.4e-101 374.4 377 58.9
MBI16_g19593_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 4.6e-100 369.4 347 58.2
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 1.1e-96 358.2 360 57.2
Oeu002141.1 Olea europaea HOM05D005709 ORTHO05D006306 1.1e-93 348.2 305 64.6
THA.LOC104809180 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 1.6e-92 344.4 500 45.0
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 7.4e-82 308.9 576 34.5
TPR.G36731 Trifolium pratense HOM05D005709 ORTHO05D006306 1.6e-81 307.8 302 57.0
Medtr4g125890 Medicago truncatula HOM05D005709 ORTHO05D006306 1.7e-78 297.7 232 65.1
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 3.5e-76 290.0 666 32.3
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 1.4e-72 278.1 531 35.6
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 4.5e-71 273.1 640 32.0
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 1.0e-67 261.9 533 35.8
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 4.5e-63 246.5 363 47.7
Oeu031122.1 Olea europaea HOM05D005709 ORTHO05D006306 7.7e-55 219.2 187 64.7
THA.LOC104821549 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 1.6e-47 194.9 155 61.9
BcaC01g02778 Brassica carinata HOM05D005709 ORTHO05D006306 7.7e-47 192.6 143 65.0
TPR.G36816 Trifolium pratense HOM05D005709 ORTHO05D006306 1.1e-45 188.7 163 56.4
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 1.9e-45 188.0 138 71.0
HPP92_015330 Vanilla planifolia HOM05D005709 ORTHO05D006306 4.5e-39 166.8 233 43.8
CBR_g78875 Chara braunii HOM05D005709 ORTHO05D006306 1.0e-38 165.6 488 27.5
Sed0017677 Sechium edule HOM05D005709 ORTHO05D006306 2.2e-38 164.5 314 37.9
Dinv13596 Davidia involucrata HOM05D005709 ORTHO05D006306 8.5e-38 162.5 229 43.2
BcaC01g02779 Brassica carinata HOM05D005709 ORTHO05D006306 3.7e-33 147.1 105 61.0
BcaC01g02777 Brassica carinata HOM05D005709 ORTHO05D006306 1.1e-32 145.6 192 45.8
TAR381G1451 Trochodendron aralioides HOM05D005709 ORTHO05D006306 5.9e-31 139.8 119 57.1
PSO210G2291 Papaver somniferum HOM05D005709 ORTHO05D006306 3.6e-20 104.0 362 26.0
PRCOL_00002122 Prasinoderma coloniale HOM05D005709 ORTHO05D006306 6.8e-19 99.8 635 24.7
Cre03.g145707 Chlamydomonas reinhardtii HOM05D005709 ORTHO05D006306 1.2e-18 99.0 140 37.1
Phvul.008G217000 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 1.1e-16 92.4 75 66.7
SEGI_13404 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 2.4e-16 91.3 127 47.2
BolC2t12478H Brassica oleracea HOM05D005709 ORTHO05D006306 6.6e-14 83.2 128 39.8
SalBow5G5475 Salvia bowleyana HOM05D036480 ORTHO05D006306 6.6e-14 83.2 98 52.0
HPP92_015331 Vanilla planifolia HOM05D005709 ORTHO05D006306 6.6e-14 83.2 56 66.1
SMO207G0001 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 4.3e-13 80.5 104 40.4
SMO162G0006 Selaginella moellendorffii HOM05D000981 ORTHO05D006306 8.0e-12 76.3 174 32.8
C02p64140 Brassica napus HOM05D005709 ORTHO05D006306 1.1e-11 75.9 128 37.5
CARHR215690 Cardamine hirsuta HOM05D005709 ORTHO05D006306 4.4e-10 70.5 55 58.2
TPR.G34440 Trifolium pratense HOM05D005709 ORTHO05D006306 7.8e-07 59.7 35 77.1
TPR.G25795 Trifolium pratense HOM05D005709 ORTHO05D006306 2.3e-06 58.2 35 74.3
Cre03.g145667 Chlamydomonas reinhardtii HOM05D005709 ORTHO05D006306 8.6e-06 56.2 101 34.7


User provided reference genes

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