Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 0.0e+00 1201.4 613 100.0
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 6.2e-165 585.1 351 83.8
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.1e-140 504.6 356 72.2
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 6.5e-138 495.4 359 70.8
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 7.4e-134 481.9 362 69.6
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 6.1e-128 462.2 348 68.4
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 4.9e-109 399.4 358 58.1
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 1.4e-108 397.9 359 56.8
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 3.1e-108 396.7 338 60.1
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 1.0e-106 391.7 356 57.6
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 2.9e-106 390.2 352 58.8
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 2.9e-106 390.2 357 58.8
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 3.8e-106 389.8 356 58.4
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 5.0e-106 389.4 355 58.0
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 1.9e-105 387.5 351 58.4
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 3.3e-105 386.7 369 56.1
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 4.7e-104 382.9 362 56.9
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.4e-103 381.3 365 55.9
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 2.3e-103 380.6 353 56.4
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 4.0e-103 379.8 374 57.5
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 1.5e-102 377.9 258 72.1
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 1.7e-101 374.4 366 54.9
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.2e-101 374.0 364 54.4
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 3.7e-101 373.2 314 60.2
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 8.3e-101 372.1 314 60.2
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 8.3e-101 372.1 360 56.1
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 1.8e-100 370.9 365 55.6
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 3.2e-100 370.2 291 63.9
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 3.2e-100 370.2 258 69.0
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 5.4e-100 369.4 306 60.5
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 7.0e-100 369.0 357 55.2
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 9.2e-100 368.6 367 54.5
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 1.3e-98 364.8 364 54.1
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 1.1e-97 361.7 351 55.8
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 1.9e-97 360.9 374 52.4
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 3.3e-97 360.1 345 56.2
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 4.3e-97 359.8 318 58.5
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 4.3e-97 359.8 345 56.5
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 5.6e-97 359.4 361 53.5
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 2.1e-96 357.5 351 55.3
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 2.8e-96 357.1 326 58.6
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 2.8e-96 357.1 326 58.3
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 4.7e-96 356.3 258 67.4
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 8.0e-96 355.5 408 50.0
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 2.3e-95 354.0 334 56.6
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 7.5e-94 349.0 260 68.8
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 1.7e-93 347.8 341 54.5
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 1.1e-92 345.1 256 66.8
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 1.1e-92 345.1 400 48.2
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 4.1e-92 343.2 256 66.4
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 1.2e-91 341.7 241 68.9
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 3.5e-91 340.1 327 54.4
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 4.6e-91 339.7 376 51.1
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 1.0e-90 338.6 270 64.4
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 1.3e-90 338.2 230 73.0
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 1.7e-90 337.8 256 66.4
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 1.7e-90 337.8 300 58.7
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 6.6e-90 335.9 230 70.0
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 6.6e-90 335.9 249 66.3
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 8.6e-90 335.5 324 55.2
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 1.5e-89 334.7 398 48.7
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 1.9e-89 334.3 344 55.8
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 2.5e-89 334.0 291 57.4
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 9.5e-89 332.0 348 51.1
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 1.6e-88 331.3 358 50.8
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 2.8e-88 330.5 324 57.1
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 1.1e-87 328.6 316 53.8
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 1.8e-87 327.8 230 70.4
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 1.8e-87 327.8 356 47.8
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 4.0e-87 326.6 210 75.2
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 1.2e-86 325.1 242 66.1
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 2.6e-86 323.9 249 65.5
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 4.4e-86 323.2 302 56.6
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 5.8e-86 322.8 340 51.8
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 5.8e-86 322.8 234 67.5
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 9.8e-86 322.0 234 69.2
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 1.3e-85 321.6 231 68.0
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 1.3e-85 321.6 231 68.0
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 1.3e-85 321.6 219 70.3
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 1.3e-85 321.6 213 71.8
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.7e-85 321.2 259 62.9
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.2e-85 320.9 321 53.3
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 6.4e-85 319.3 256 61.7
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 6.4e-85 319.3 256 61.7
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 6.4e-85 319.3 232 65.5
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 6.4e-85 319.3 258 63.6
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 1.1e-84 318.5 336 51.8
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 1.1e-84 318.5 263 61.6
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.9e-84 317.8 319 51.1
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 2.4e-84 317.4 326 52.8
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 3.2e-84 317.0 257 61.9
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.2e-84 317.0 232 65.5
vmacro00507 Vaccinium macrocarpon HOM05D003979 ORTHO05D005530 5.4e-84 316.2 213 76.1
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 9.2e-84 315.5 261 61.7
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.6e-83 314.7 321 52.6
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 4.6e-83 313.2 347 51.3
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 4.6e-83 313.2 187 79.1
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 1.0e-82 312.0 257 61.9
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 2.3e-82 310.8 259 61.4
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 3.9e-82 310.1 188 74.5
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 5.6e-81 306.2 193 76.2
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 7.3e-81 305.8 214 70.6
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 5.2e-79 299.7 249 61.0
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 8.4e-77 292.4 247 60.7
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 1.2e-72 278.5 233 64.4
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 3.1e-71 273.9 187 70.6
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 2.3e-66 257.7 246 55.3
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 3.6e-64 250.4 153 80.4
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 6.9e-63 246.1 219 53.9
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 1.2e-62 245.4 232 51.7
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 4.5e-62 243.4 201 55.7
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 9.9e-62 242.3 216 54.6
vmacro01853 Vaccinium macrocarpon HOM05D003979 ORTHO05D030713 1.6e-56 224.9 211 64.5
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 2.2e-53 214.5 190 55.3
vmacro04995 Vaccinium macrocarpon HOM05D000208 ORTHO05D030713 2.9e-53 214.2 203 63.1
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 6.4e-53 213.0 121 82.6
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 2.7e-51 207.6 176 58.0
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 1.0e-50 205.7 173 57.2
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 1.5e-49 201.8 103 91.3
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.5e-49 201.8 186 55.4
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 4.8e-48 196.8 298 39.3
vmacro05929 Vaccinium macrocarpon HOM05D003979 ORTHO05D426723 8.4e-45 186.0 203 54.2
vmacro07949 Vaccinium macrocarpon HOM05D000068 ORTHO05D000084 5.1e-42 176.8 130 70.0
vmacro01475 Vaccinium macrocarpon HOM05D003979 ORTHO05D030713 8.2e-40 169.5 149 63.1
vmacro09939 Vaccinium macrocarpon HOM05D000763 ORTHO05D030713 3.4e-38 164.1 220 50.0
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 8.2e-32 142.9 79 81.0
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 4.5e-30 137.1 69 88.4
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 1.4e-23 115.5 183 42.1
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 1.0e-13 82.8 57 66.7
vmacro17907 Vaccinium macrocarpon HOM05D000224 ORTHO05D000337 2.6e-09 68.2 70 54.3
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 6.3e-08 63.5 50 64.0
vmacro06322 Vaccinium macrocarpon HOM05D000560 ORTHO05D000417 1.1e-07 62.8 97 45.4
vmacro14399 Vaccinium macrocarpon HOM05D003274 ORTHO05D003714 5.3e-07 60.5 51 62.7
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 3.5e-06 57.8 131 28.2
TAR188G0003 Trochodendron aralioides HOM05D005712 ORTHO05D007865 4.5e-06 57.4 108 40.7


User provided reference genes

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