Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 9.1e-50 199.9 99 100.0
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 3.6e-46 188.0 96 94.8
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 3.6e-46 188.0 96 93.8
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 6.1e-46 187.2 97 92.8
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 2.6e-44 181.8 97 87.6
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.3e-43 179.5 93 92.5
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 2.2e-43 178.7 93 92.5
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 5.4e-42 174.1 97 83.5
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 1.2e-41 172.9 105 83.8
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 2.7e-41 171.8 97 82.5
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 4.5e-41 171.0 97 83.5
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 1.3e-40 169.5 96 86.5
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 1.3e-40 169.5 97 81.4
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 1.3e-40 169.5 97 84.5
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 1.7e-40 169.1 95 86.3
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 1.7e-40 169.1 97 84.5
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 2.3e-40 168.7 98 84.7
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 2.9e-40 168.3 99 82.8
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 2.9e-40 168.3 99 82.8
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 5.0e-40 167.5 96 85.4
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 5.0e-40 167.5 100 81.0
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 8.6e-40 166.8 98 84.7
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 1.1e-39 166.4 97 82.5
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 1.1e-39 166.4 97 79.4
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 1.1e-39 166.4 97 79.4
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 1.1e-39 166.4 95 84.2
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 1.9e-39 165.6 100 83.0
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.9e-39 165.6 100 82.0
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.9e-39 165.6 100 82.0
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 1.9e-39 165.6 100 82.0
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 1.9e-39 165.6 95 86.3
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 4.2e-39 164.5 100 77.0
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 4.2e-39 164.5 100 77.0
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 4.2e-39 164.5 100 77.0
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 4.2e-39 164.5 95 82.1
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 4.2e-39 164.5 98 83.7
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 7.2e-39 163.7 100 82.0
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 9.5e-39 163.3 95 82.1
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 9.5e-39 163.3 97 79.4
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 1.2e-38 162.9 100 82.0
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 1.2e-38 162.9 95 80.0
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 1.6e-38 162.5 97 79.4
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.1e-38 162.2 95 80.0
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 2.8e-38 161.8 97 78.4
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 2.8e-38 161.8 95 83.2
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.6e-38 161.4 100 76.0
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 4.7e-38 161.0 90 82.2
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 6.1e-38 160.6 97 78.4
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 8.0e-38 160.2 100 80.0
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 1.8e-37 159.1 95 78.9
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 1.8e-37 159.1 94 80.9
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 2.3e-37 158.7 97 75.3
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 3.0e-37 158.3 123 68.3
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 3.0e-37 158.3 95 76.8
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 4.0e-37 157.9 94 76.6
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 4.0e-37 157.9 96 78.1
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 6.8e-37 157.1 96 78.1
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 6.8e-37 157.1 96 78.1
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 6.8e-37 157.1 92 81.5
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 6.8e-37 157.1 95 80.0
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 6.8e-37 157.1 96 79.2
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 1.2e-36 156.4 98 77.6
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 2.6e-36 155.2 99 78.8
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 2.6e-36 155.2 94 74.5
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 3.4e-36 154.8 92 80.4
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 3.4e-36 154.8 94 74.5
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 5.7e-36 154.1 97 75.3
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 7.5e-36 153.7 96 71.9
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 9.8e-36 153.3 100 77.0
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 1.7e-35 152.5 98 77.6
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 1.7e-35 152.5 93 80.6
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 1.7e-35 152.5 90 78.9
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 2.2e-35 152.1 97 75.3
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 2.8e-35 151.8 96 74.0
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 3.7e-35 151.4 97 74.2
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 6.3e-35 150.6 97 75.3
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 6.3e-35 150.6 96 76.0
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 6.3e-35 150.6 96 76.0
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 6.3e-35 150.6 96 76.0
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 6.3e-35 150.6 96 76.0
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 1.1e-34 149.8 97 73.2
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 1.1e-34 149.8 95 71.6
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 1.1e-34 149.8 97 74.2
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 1.4e-34 149.4 96 75.0
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 1.4e-34 149.4 94 72.3
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 3.1e-34 148.3 97 74.2
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 4.1e-34 147.9 103 71.8
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 1.3e-32 142.9 89 75.3
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 1.3e-32 142.9 79 84.8
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 1.3e-32 142.9 79 84.8
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 1.5e-31 139.4 100 75.0
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 1.2e-30 136.3 97 72.2
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.2e-30 136.3 97 72.2
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 1.2e-30 136.3 82 79.3
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 1.6e-30 136.0 97 72.2
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 2.1e-30 135.6 79 82.3
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 2.8e-30 135.2 97 72.2
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 2.8e-30 135.2 97 72.2
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 2.8e-30 135.2 80 80.0
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 4.7e-30 134.4 97 71.1
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 8.0e-30 133.7 95 65.3
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 6.8e-29 130.6 79 74.7
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 4.9e-27 124.4 83 71.1
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 2.7e-25 118.6 80 68.8
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 7.8e-25 117.1 103 61.2
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 1.7e-24 115.9 63 88.9
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 3.0e-24 115.2 90 64.4
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.6e-22 109.4 117 55.6
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 2.1e-22 109.0 85 58.8
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 3.7e-19 98.2 71 64.8
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 1.4e-18 96.3 88 52.3
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 1.3e-16 89.7 101 47.5
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 4.3e-15 84.7 86 50.0
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 8.9e-13 77.0 60 63.3
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.0e-12 75.9 46 73.9
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 8.3e-11 70.5 72 48.6
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 3.5e-09 65.1 41 75.6
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.7e-08 62.8 38 68.4
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 2.8e-06 55.5 46 54.3


User provided reference genes

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