Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21683 Vaccinium macrocarpon HOM05D002561 ORTHO05D008175 1.4e-122 443.0 224 100.0
CSS0039568 Camellia sinensis var. sinensis HOM05D002561 ORTHO05D008175 4.7e-54 215.3 221 57.0
Actinidia15362 Actinidia chinensis HOM05D002561 ORTHO05D008175 2.4e-50 203.0 223 54.3
Rhsim06G0028500 Rhododendron simsii HOM05D002561 ORTHO05D008175 7.8e-49 198.0 211 56.9
FvH4_2g39280 Fragaria vesca HOM05D002561 ORTHO05D008175 2.1e-46 189.9 223 52.9
FAN27G3197 Fragaria x ananassa HOM05D002561 ORTHO05D008175 2.1e-46 189.9 223 54.7
PGSC0003DMG400003749 Solanum tuberosum HOM05D002561 ORTHO05D008175 2.1e-46 189.9 221 53.4
Sopen04g034360 Solanum pennellii HOM05D002561 ORTHO05D008175 2.8e-46 189.5 221 53.8
Solyc04g080770.3 Solanum lycopersicum HOM05D002561 ORTHO05D008175 4.8e-46 188.7 228 52.6
COL.COLO4_26238 Corchorus olitorius HOM05D002561 ORTHO05D008175 1.4e-45 187.2 220 55.0
CAN.G851.43 Capsicum annuum HOM05D002561 ORTHO05D008175 1.8e-45 186.8 221 52.0
FAN20G1367 Fragaria x ananassa HOM05D002561 ORTHO05D008175 3.1e-45 186.0 223 53.8
RcHm_v2.0_Chr6g0301721 Rosa chinensis HOM05D002561 ORTHO05D008175 9.0e-45 184.5 223 53.4
FAN26G2864 Fragaria x ananassa HOM05D002561 ORTHO05D008175 5.8e-44 181.8 223 53.4
Prupe.1G373900 Prunus persica HOM05D002561 ORTHO05D008175 9.9e-44 181.0 228 53.1
Duzib093G1612 Durio zibethinus HOM05D002561 ORTHO05D008175 2.9e-43 179.5 222 55.0
FAN15G1503 Fragaria x ananassa HOM05D002561 ORTHO05D008175 2.9e-43 179.5 223 52.9
Nitab4.5_0001861g0050 Nicotiana tabacum HOM05D002561 ORTHO05D008175 3.8e-43 179.1 228 48.7
Nitab4.5_0013623g0010 Nicotiana tabacum HOM05D002561 ORTHO05D008175 4.9e-43 178.7 221 49.8
Thecc.08G034100 Theobroma cacao HOM05D002561 ORTHO05D008175 4.9e-43 178.7 226 52.2
TAR381G1262 Trochodendron aralioides HOM05D002561 ORTHO05D008175 4.9e-43 178.7 218 54.6
Manes.05G154700 Manihot esculenta HOM05D002561 ORTHO05D008175 1.1e-42 177.6 215 53.0
Cc10_g02420 Coffea canephora HOM05D002561 ORTHO05D008175 2.4e-42 176.4 233 49.8
Eucgr.F01859 Eucalyptus grandis HOM05D002561 ORTHO05D008175 5.4e-42 175.3 222 48.6
Atru.chr13.400 Acer truncatum HOM05D002561 ORTHO05D008175 1.6e-41 173.7 138 68.1
Haze_22559 Corylus avellana HOM05D002561 ORTHO05D008175 1.6e-41 173.7 172 59.3
Cfa013881 Carpinus fangiana HOM05D002561 ORTHO05D008175 2.7e-41 172.9 207 53.6
MD15G1022100 Malus domestica HOM05D002561 ORTHO05D008175 2.7e-41 172.9 221 52.0
TWI56G0768 Tripterygium wilfordii HOM05D002561 ORTHO05D008175 3.5e-41 172.6 218 50.5
MELO3C003793.2 Cucumis melo HOM05D002561 ORTHO05D008175 6.0e-41 171.8 223 52.5
CiPaw.08G060900 Carya illinoinensis HOM05D002561 ORTHO05D008175 1.7e-40 170.2 212 50.5
Gorai.009G198600 Gossypium raimondii HOM05D002561 ORTHO05D008175 1.7e-40 170.2 226 51.8
Gohir.D05G193600 Gossypium hirsutum HOM05D002561 ORTHO05D008175 3.0e-40 169.5 226 51.8
CsaV3_3G045490 Cucumis sativus L. HOM05D002561 ORTHO05D008175 3.9e-40 169.1 227 49.8
GSVIVG01009778001 Vitis vinifera HOM05D002561 ORTHO05D008175 6.6e-40 168.3 212 54.2
CANSAT25G1258 Cannabis sativa HOM05D002561 ORTHO05D008175 1.1e-39 167.5 223 49.3
QL02p010154 Quercus lobata HOM05D002561 ORTHO05D008175 1.1e-39 167.5 247 47.0
Gohir.A05G190200 Gossypium hirsutum HOM05D002561 ORTHO05D008175 1.5e-39 167.2 226 49.6
SalBow8G2957 Salvia bowleyana HOM05D002561 ORTHO05D008175 2.5e-39 166.4 232 50.0
Migut.N03115 Erythranthe guttata HOM05D002561 ORTHO05D008175 3.3e-39 166.0 223 49.3
Lj4A33G81 Lonicera japonica HOM05D002561 ORTHO05D008175 3.3e-39 166.0 226 49.1
ClCG05G018690 Citrullus lanatus HOM05D002561 ORTHO05D008175 5.6e-39 165.2 142 64.8
SalBow8G4848 Salvia bowleyana HOM05D002561 ORTHO05D008175 1.6e-38 163.7 232 50.0
Potri.002G031100 Populus trichocarpa HOM05D002561 ORTHO05D008175 4.8e-38 162.2 167 55.7
PGR031G3600 Punica granatum HOM05D002561 ORTHO05D008175 8.1e-38 161.4 214 47.7
Nn5g29715 Nelumbo nucifera HOM05D002561 ORTHO05D008175 1.8e-37 160.2 227 48.5
Ca_13381_v3 Cicer arietinum L. HOM05D002561 ORTHO05D006466 2.4e-37 159.8 121 68.6
Ca_30047_v3 Cicer arietinum L. HOM05D002561 ORTHO05D006466 2.4e-37 159.8 121 68.6
Sed0027585 Sechium edule HOM05D002561 ORTHO05D008175 4.0e-37 159.1 217 47.5
Oeu046223.1 Olea europaea HOM05D002561 ORTHO05D008175 1.2e-36 157.5 222 48.2
HanXRQChr05g0151221 Helianthus annuus HOM05D002561 ORTHO05D008175 4.5e-36 155.6 228 48.2
Peaxi162Scf00189g00816 Petunia axillaris HOM05D002561 ORTHO05D008175 4.5e-36 155.6 223 48.9
AUR62034526 Chenopodium quinoa HOM05D002561 ORTHO05D008175 5.8e-36 155.2 108 75.0
Sc15g0007160 Simmondsia chinensis HOM05D002561 ORTHO05D008175 1.3e-35 154.1 154 57.1
arahy.Tifrunner.gnm1.ann1.1U19Q5 Arachis hypogaea HOM05D002561 ORTHO05D008175 1.7e-35 153.7 105 72.4
arahy.Tifrunner.gnm1.ann1.M2UU0S Arachis hypogaea HOM05D002561 ORTHO05D008175 1.7e-35 153.7 105 72.4
Lsat_1_v5_gn_5_26741 Lactuca sativa HOM05D002561 ORTHO05D008175 1.7e-35 153.7 228 43.0
Psat6g009920 Pisum sativum HOM05D002561 ORTHO05D008175 2.2e-35 153.3 106 70.8
VMungo0647G1104 Vigna mungo HOM05D002561 ORTHO05D008175 3.8e-35 152.5 120 68.3
unitig_22.g6786 Utricularia gibba HOM05D002561 ORTHO05D008175 1.1e-34 151.0 217 46.1
MBI05_g12583_MAGBIO Magnolia biondii HOM05D002561 ORTHO05D008175 1.4e-34 150.6 166 56.6
TPR.G30486 Trifolium pratense HOM05D002561 ORTHO05D008175 1.4e-34 150.6 98 75.5
DCAR_017516 Daucus carota HOM05D002561 ORTHO05D008175 1.9e-34 150.2 218 45.9
BcaB05g22389 Brassica carinata HOM05D002561 ORTHO05D008175 2.4e-34 149.8 109 70.6
C02p13730 Brassica napus HOM05D002561 ORTHO05D008175 2.4e-34 149.8 109 70.6
BolC2t07491H Brassica oleracea HOM05D002561 ORTHO05D008175 2.4e-34 149.8 109 70.6
Carub.0008s1849 Capsella rubella HOM05D002561 ORTHO05D008175 2.4e-34 149.8 112 71.4
Aa31sc143G30 Aethionema arabicum HOM05D002561 ORTHO05D008175 3.2e-34 149.4 108 71.3
Medtr1g022980 Medicago truncatula HOM05D002561 ORTHO05D008175 3.2e-34 149.4 98 74.5
Ah.05g180860 Amaranthus hybridus HOM05D002561 ORTHO05D008175 4.2e-34 149.1 132 62.9
A02p08080 Brassica napus HOM05D002561 ORTHO05D008175 5.5e-34 148.7 103 73.8
BraA02t05881Z Brassica rapa HOM05D002561 ORTHO05D008175 5.5e-34 148.7 103 73.8
CARHR271740 Cardamine hirsuta HOM05D002561 ORTHO05D008175 5.5e-34 148.7 108 71.3
AL8G34040 Arabidopsis lyrata HOM05D002561 ORTHO05D008175 9.3e-34 147.9 109 73.4
AT5G57960 Arabidopsis thaliana HOM05D002561 ORTHO05D008175 9.3e-34 147.9 109 73.4
Thhalv10013185m.g Eutrema salsugineum HOM05D002561 ORTHO05D008175 2.1e-33 146.7 109 73.4
Ciclev10000772m.g Citrus clementina HOM05D002561 ORTHO05D008175 3.5e-33 146.0 99 74.7
Glyma.17G253900 Glycine max HOM05D002561 ORTHO05D008175 3.5e-33 146.0 110 70.9
Lj5g0007882 Lotus japonicus HOM05D002561 ORTHO05D008175 6.0e-33 145.2 106 70.8
Lalb_Chr14g0369571 Lupinus albus HOM05D002561 ORTHO05D008175 6.0e-33 145.2 205 48.3
Phvul.001G011200 Phaseolus vulgaris HOM05D002561 ORTHO05D008175 7.9e-33 144.8 120 67.5
CDE06G0545 Ceratophyllum demersum HOM05D002561 ORTHO05D008175 1.3e-32 144.1 191 47.1
Sabra02G0024900 Salix brachista HOM05D002561 ORTHO05D008175 1.3e-32 144.1 99 73.7
Hund17196 Selenicereus undatus HOM05D002561 ORTHO05D008175 8.7e-32 141.4 172 52.3
EL10Ac1g00604 Beta vulgaris HOM05D002561 ORTHO05D008175 2.5e-31 139.8 98 72.4
Hma1.2p1_0469F.1_g158880 Hydrangea macrophylla HOM05D002561 ORTHO05D008175 2.5e-31 139.8 236 42.4
Hma1.2p1_0469F.1_g158890 Hydrangea macrophylla HOM05D002561 ORTHO05D008175 2.5e-31 139.8 236 42.4
ATR0665G429 Amborella trichopoda HOM05D002561 ORTHO05D008175 9.6e-31 137.9 164 51.2
PSO764G0318 Papaver somniferum HOM05D002561 ORTHO05D008175 4.8e-30 135.6 98 72.4
Aqoxy5G01541 Aquilegia oxysepala HOM05D002561 ORTHO05D008175 6.2e-30 135.2 96 69.8
HPP92_013173 Vanilla planifolia HOM05D002561 ORTHO05D008175 6.2e-30 135.2 109 67.9
HPP92_013174 Vanilla planifolia HOM05D002561 ORTHO05D008175 6.2e-30 135.2 109 67.9
HPP92_013175 Vanilla planifolia HOM05D002561 ORTHO05D008175 6.2e-30 135.2 109 67.9
AagrBONN_evm.TU.Sc2ySwM_117.3804 Anthoceros agrestis HOM05D002561 ORTHO05D008175 8.1e-30 134.8 108 63.0
AUR62014473 Chenopodium quinoa HOM05D002561 ORTHO05D008175 8.1e-30 134.8 145 55.2
PSO731G0115 Papaver somniferum HOM05D002561 ORTHO05D008175 3.1e-29 132.9 98 71.4
Os11g0592700 Oryza sativa ssp. japonica HOM05D002561 ORTHO05D008175 6.9e-29 131.7 96 70.8
Zm00001eb167660 Zea mays HOM05D002561 ORTHO05D008175 6.9e-29 131.7 143 54.5
AUR62043867 Chenopodium quinoa HOM05D002561 ORTHO05D034350 3.4e-28 129.4 87 77.0
Sp6g19630 Schrenkiella parvula HOM05D002561 ORTHO05D008175 1.7e-27 127.1 110 61.8
Mapoly0064s0088 Marchantia polymorpha HOM05D002561 ORTHO05D008175 1.9e-26 123.6 195 41.5
Pp3c26_340 Physcomitrium patens HOM05D002561 ORTHO05D008175 8.7e-24 114.8 189 42.3
SMO364G0133 Selaginella moellendorffii HOM05D002561 ORTHO05D008175 1.9e-23 113.6 103 55.3
SGA_v2.0_scaffold162G37906 Striga asiatica HOM05D002561 ORTHO05D008175 1.3e-22 110.9 226 38.9
CBR_g52689 Chara braunii HOM05D000019 ORTHO05D000048 8.2e-22 108.2 110 57.3
Cre16.g665650 Chlamydomonas reinhardtii HOM05D002561 ORTHO05D008175 1.0e-16 91.3 85 56.5
PRCOL_00004156 Prasinoderma coloniale HOM05D002561 ORTHO05D008175 1.5e-15 87.4 117 47.9
SEGI_18357 Sequoiadendron giganteum HOM05D002561 ORTHO05D008175 1.2e-12 77.8 104 45.2
AUR62043856 Chenopodium quinoa HOM05D002521 ORTHO05D034350 6.7e-08 62.0 41 73.2
SEGI_08221 Sequoiadendron giganteum HOM05D002561 ORTHO05D008175 6.7e-08 62.0 49 65.3
MCO16G051 Micromonas commoda HOM05D002561 ORTHO05D008175 4.8e-06 55.8 63 49.2


User provided reference genes

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