Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 0.0e+00 1285.4 654 100.0
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 1.2e-203 713.8 656 63.3
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.3e-123 448.0 663 45.9
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 2.2e-123 447.2 663 45.9
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 6.5e-120 435.6 660 44.7
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 7.3e-87 325.9 515 43.9
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 3.0e-80 303.9 668 35.9
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 2.1e-46 191.4 732 29.4
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.1e-42 179.1 686 30.5
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 1.1e-39 169.1 502 33.5
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 1.3e-38 165.6 691 28.8
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 2.1e-38 164.9 442 32.8
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 3.4e-36 157.5 692 29.0
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 2.2e-35 154.8 679 29.0
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 4.9e-35 153.7 696 28.7
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 1.4e-34 152.1 694 28.7
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 6.0e-33 146.7 426 31.7
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 1.2e-28 132.5 715 26.3
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 1.7e-27 128.6 656 27.3
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 1.9e-26 125.2 380 30.0
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 1.2e-25 122.5 682 27.6
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 2.7e-25 121.3 320 32.8
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 7.9e-25 119.8 497 30.4
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 3.0e-24 117.9 655 27.6
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 6.7e-24 116.7 379 31.4
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 8.8e-24 116.3 539 28.2
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 5.7e-23 113.6 295 33.2
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 3.7e-22 110.9 306 35.0
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 4.8e-22 110.5 716 26.5
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 4.8e-22 110.5 800 26.0
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 1.1e-21 109.4 682 25.2
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 1.8e-21 108.6 655 25.0
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 4.1e-21 107.5 259 37.1
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 4.1e-21 107.5 668 25.9
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 6.9e-21 106.7 856 24.2
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 6.9e-21 106.7 298 32.6
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 2.0e-20 105.1 673 25.9
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 3.4e-20 104.4 654 26.5
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 1.3e-19 102.4 381 29.4
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 2.9e-19 101.3 341 30.2
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 8.5e-19 99.8 674 25.4
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.1e-18 99.4 677 25.0
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 3.2e-18 97.8 305 30.5
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 3.6e-17 94.4 418 29.2
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 3.6e-17 94.4 325 32.0
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 2.3e-16 91.7 429 28.9
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 3.9e-16 90.9 362 30.9
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 3.9e-16 90.9 428 28.3
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 2.0e-15 88.6 284 31.7
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 5.7e-15 87.0 175 38.9
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 1.3e-14 85.9 677 25.4
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 1.7e-14 85.5 674 26.0
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 2.8e-14 84.7 182 39.6
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 8.2e-14 83.2 649 25.6
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 1.1e-13 82.8 240 35.0
Lj4P42T20 Lonicera japonica HOM05D005945 ORTHO05D006749 1.4e-13 82.4 351 31.6
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 1.4e-13 82.4 261 31.4
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 1.8e-13 82.0 326 29.8
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 1.8e-13 82.0 175 38.9
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 4.1e-13 80.9 208 34.1
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 1.2e-12 79.3 671 25.6
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 1.2e-12 79.3 484 27.7
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 1.5e-12 79.0 357 31.1
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 2.6e-12 78.2 354 26.3
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 4.5e-12 77.4 574 24.9
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 7.7e-12 76.6 351 29.1
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 7.7e-12 76.6 655 23.7
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 1.0e-11 76.3 686 24.9
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.9e-11 74.7 310 28.4
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 2.9e-11 74.7 547 23.9
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 5.0e-11 73.9 273 27.5
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 6.5e-11 73.6 215 34.4
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 6.5e-11 73.6 211 32.7
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 8.5e-11 73.2 275 31.6
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 1.9e-10 72.0 289 28.4
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 4.2e-10 70.9 674 27.0
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 5.5e-10 70.5 182 35.7
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 4.7e-09 67.4 265 30.6
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 1.8e-08 65.5 259 32.8
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.3e-08 65.1 732 22.3
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 3.0e-08 64.7 186 28.0
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 3.0e-08 64.7 186 28.0
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 3.0e-08 64.7 276 26.4
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 6.7e-08 63.5 175 29.1
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 6.7e-08 63.5 175 29.1
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 1.1e-07 62.8 362 25.4
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 1.5e-07 62.4 250 30.0
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 2.0e-07 62.0 225 27.1
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 9.7e-07 59.7 227 26.4
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 2.8e-06 58.2 309 26.2
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 3.7e-06 57.8 207 30.4


User provided reference genes

Program Settings