Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21611 Vaccinium macrocarpon HOM05D003945 ORTHO05D004625 0.0e+00 1770.0 894 100.0
Actinidia22566 Actinidia chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1403.3 835 85.1
CSS0008782 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 0.0e+00 1395.9 834 84.4
GSVIVG01009647001 Vitis vinifera HOM05D003945 ORTHO05D004625 0.0e+00 1343.6 834 82.3
Ciclev10000250m.g Citrus clementina HOM05D003945 ORTHO05D004625 0.0e+00 1336.2 841 81.9
CANSAT25G0653 Cannabis sativa HOM05D003945 ORTHO05D004625 0.0e+00 1331.6 839 80.6
Thecc.08G022100 Theobroma cacao HOM05D003945 ORTHO05D004625 0.0e+00 1322.4 837 80.9
Potri.002G133300 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1319.3 835 81.1
Duzib116G0373 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1316.6 837 80.5
Rhsim06G0036600 Rhododendron simsii HOM05D003945 ORTHO05D004625 0.0e+00 1316.6 735 91.8
Cfa018443 Carpinus fangiana HOM05D003945 ORTHO05D004625 0.0e+00 1314.7 842 80.8
Dinv39382 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1313.9 848 79.7
Manes.05G163500 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1312.7 844 81.4
Duzib093G0983 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1311.6 837 80.6
Gohir.D06G009400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1310.0 838 80.1
Gorai.010G012200 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1310.0 838 80.1
CsaV3_2G028440 Cucumis sativus L. HOM05D003945 ORTHO05D004625 0.0e+00 1308.9 837 79.9
arahy.Tifrunner.gnm1.ann1.6F7CQG Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1307.4 834 80.9
Cpa.g.sc64.47 Carica papaya HOM05D003945 ORTHO05D004625 0.0e+00 1307.4 829 80.2
Gohir.A06G012000 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1305.8 838 80.0
CiPaw.15G072600 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1305.4 839 80.2
Haze_17624 Corylus avellana HOM05D003945 ORTHO05D004625 0.0e+00 1305.0 817 82.5
QL02p007358 Quercus lobata HOM05D003945 ORTHO05D004625 0.0e+00 1305.0 836 80.7
RcHm_v2.0_Chr6g0300451 Rosa chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1304.7 848 79.6
FvH4_2g40290 Fragaria vesca HOM05D003945 ORTHO05D004625 0.0e+00 1304.3 844 79.6
FAN27G0143 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1304.3 844 79.7
Potri.014G040800 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1303.1 835 80.5
Duzib041G0798 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1302.3 837 79.9
Cc10_g03360 Coffea canephora HOM05D003945 ORTHO05D004625 0.0e+00 1301.6 834 79.6
TWI56G0898 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1301.2 842 80.3
FAN20G0651 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1298.5 844 79.4
Sed0018308 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1298.1 837 79.5
Prupe.1G383600 Prunus persica HOM05D003945 ORTHO05D004625 0.0e+00 1297.3 845 79.1
Nn5g29493 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1297.0 843 79.0
Gorai.009G205100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1295.0 837 78.6
Lj5g0000532 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1295.0 832 80.5
Aqoxy6G01012 Aquilegia oxysepala HOM05D003945 ORTHO05D004625 0.0e+00 1294.6 838 79.5
MBI16_g13147_MAGBIO Magnolia biondii HOM05D003945 ORTHO05D004625 0.0e+00 1292.3 835 79.5
FAN15G1095 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1291.9 852 78.5
Psat5g018920 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1291.9 832 79.4
TAR381G0557 Trochodendron aralioides HOM05D003945 ORTHO05D004625 0.0e+00 1291.2 829 80.0
Glyma.06G034400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1290.8 834 80.2
Glyma.14G077200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1290.8 826 79.7
Gohir.D05G199800 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1288.9 837 78.4
Medtr3g111630 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1288.5 832 80.2
Sed0019202 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1288.5 839 79.1
arahy.Tifrunner.gnm1.ann1.SKM2GN Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1287.3 869 73.2
Sabra02G0104100 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1285.8 831 80.5
Glyma.04G034200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1285.4 834 80.3
Lj4A44G44 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1285.0 829 78.9
TWI12G1285 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1281.5 840 80.8
Phvul.009G055900 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1280.8 830 80.2
Gohir.A05G260400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1277.3 836 79.1
Lj1g0024333 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1275.8 828 79.5
VMungo0647G1838 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1275.8 819 79.5
Gorai.009G274100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1275.4 836 77.8
THA.LOC104806880 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1274.2 829 78.9
CiPaw.16G054000 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1273.8 833 79.0
Nitab4.5_0003588g0030 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1273.5 818 80.3
PGR031G2694 Punica granatum HOM05D003945 ORTHO05D004625 0.0e+00 1273.5 819 79.7
THA.LOC104809128 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1273.5 829 78.6
TPR.G12378 Trifolium pratense HOM05D003945 ORTHO05D004625 0.0e+00 1273.1 835 79.5
Gohir.D05G262200 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1272.7 836 77.8
Peaxi162Scf00057g01112 Petunia axillaris HOM05D003945 ORTHO05D004625 0.0e+00 1272.7 831 79.8
Lalb_Chr14g0369061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1271.9 840 79.3
PSO541G5148 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1270.0 860 76.5
Lalb_Chr22g0355401 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1269.2 838 78.0
Sabra14G0029800 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1268.1 885 75.8
MD08G1036300 Malus domestica HOM05D003945 ORTHO05D004625 0.0e+00 1267.7 810 79.6
MSTRG.24306 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1266.9 837 78.7
Manes.18G029900 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1266.9 822 78.5
PSO675G7084 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1266.9 860 76.2
SalBow8G1011 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1266.9 819 79.2
CAN.G371.130 Capsicum annuum HOM05D003945 ORTHO05D004625 0.0e+00 1266.5 827 79.9
Lalb_Chr24g0399061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1266.5 848 77.5
Eucgr.A00488 Eucalyptus grandis HOM05D003945 ORTHO05D004625 0.0e+00 1263.8 832 80.2
Nn1g05109 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1263.8 831 78.9
Lsat_1_v5_gn_1_18561 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1262.7 822 79.8
PGSC0003DMG400016879 Solanum tuberosum HOM05D003945 ORTHO05D004625 0.0e+00 1262.3 819 78.6
Sopen04g033470 Solanum pennellii HOM05D003945 ORTHO05D004625 0.0e+00 1261.9 827 79.4
Solyc04g079900.3 Solanum lycopersicum HOM05D003945 ORTHO05D004625 0.0e+00 1260.4 827 79.4
AUR62033857 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1258.0 834 77.5
Nitab4.5_0000110g0200 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1258.0 862 75.4
HanXRQChr00c0117g0571731 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1255.0 834 78.8
Carub.0008s0641 Capsella rubella HOM05D003945 ORTHO05D004625 0.0e+00 1254.6 835 76.8
Psat6g032680 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1252.7 835 79.0
Thhalv10022547m.g Eutrema salsugineum HOM05D003945 ORTHO05D004625 0.0e+00 1251.9 832 77.0
Aa31LG9G12670 Aethionema arabicum HOM05D003945 ORTHO05D004625 0.0e+00 1249.6 833 76.2
VMungo1309G1712 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1248.8 829 78.2
Oeu009604.1 Olea europaea HOM05D003945 ORTHO05D004625 0.0e+00 1245.7 864 75.7
AUR62041666 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1245.3 856 74.9
AT5G42620 Arabidopsis thaliana HOM05D003945 ORTHO05D004625 0.0e+00 1245.0 806 79.2
CARHR181510 Cardamine hirsuta HOM05D003945 ORTHO05D004625 0.0e+00 1244.2 831 77.1
BcaC06g31752 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1243.8 837 77.4
AL8G18650 Arabidopsis lyrata HOM05D003945 ORTHO05D004625 0.0e+00 1240.7 833 77.1
BcaC02g10772 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1240.3 827 77.1
C04p25260 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1240.3 827 77.1
BolC4t24032H Brassica oleracea HOM05D003945 ORTHO05D004625 0.0e+00 1240.3 827 77.1
DCAR_019505 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1239.6 818 77.0
DCAR_012756 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1238.8 815 77.2
ECA247G1056 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1238.4 834 78.3
ATR0733G077 Amborella trichopoda HOM05D003945 ORTHO05D004625 0.0e+00 1238.0 807 78.9
Sp2g07000 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1236.5 845 76.6
SpUn0022_0010 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1236.5 845 76.6
SpUn0026_0070 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1236.5 845 76.6
SpUn0029_0030 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1236.5 845 76.6
EL10Ac1g01765 Beta vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1234.9 829 76.2
Dinv36042 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1234.2 767 83.7
A06p48280 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1233.4 834 77.0
Ah.11g043210 Amaranthus hybridus HOM05D003945 ORTHO05D004625 0.0e+00 1232.2 830 75.9
BraA06t27697Z Brassica rapa HOM05D003945 ORTHO05D004625 0.0e+00 1231.9 834 76.9
HanXRQChr04g0104741 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1228.0 818 77.1
MELO3C010920.2 Cucumis melo HOM05D003945 ORTHO05D004625 0.0e+00 1224.9 878 72.1
MSTRG.1299 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1215.7 833 75.0
HanXRQChr09g0268441 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1213.7 832 77.0
Hund17646 Selenicereus undatus HOM05D003945 ORTHO05D004625 0.0e+00 1213.7 826 74.8
CDE07G1908 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1211.8 845 74.2
Os03g0731500 Oryza sativa ssp. japonica HOM05D003945 ORTHO05D004625 0.0e+00 1211.4 830 76.3
Atru.chr13.549 Acer truncatum HOM05D003945 ORTHO05D004625 0.0e+00 1208.7 870 74.5
CDE04G0514 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1206.8 843 74.0
Gohir.A05G196700 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1201.8 838 74.3
Lsat_1_v5_gn_4_119740 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1200.7 840 76.2
SGA_v2.0_scaffold48G18049 Striga asiatica HOM05D003945 ORTHO05D004625 0.0e+00 1200.3 824 70.6
Zm00001eb056220 Zea mays HOM05D003945 ORTHO05D004625 0.0e+00 1198.7 834 74.6
ECA232G0159 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1198.0 834 76.4
Glyma.17G248400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1193.3 766 81.1
Lj4C783T17 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1191.0 855 73.2
Medtr1g021950 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1174.5 826 74.0
Migut.C00687 Erythranthe guttata HOM05D003945 ORTHO05D004625 0.0e+00 1171.4 822 74.6
SalBow8G4281 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1159.4 819 73.9
Phvul.001G016500 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1151.3 695 82.7
Ca_13337_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 0.0e+00 1140.9 834 73.0
Ca_15527_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 0.0e+00 1140.6 838 74.1
SEGI_23274 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 0.0e+00 1137.5 835 71.5
SGA_v2.0_scaffold24G10266 Striga asiatica HOM05D003945 ORTHO05D004625 0.0e+00 1135.2 905 67.4
Sc02g0006540 Simmondsia chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1133.6 767 75.6
Mapoly0001s0355 Marchantia polymorpha HOM05D003945 ORTHO05D004625 0.0e+00 1124.0 833 69.5
SEGI_40605 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 0.0e+00 1115.1 805 71.7
TPR.G15756 Trifolium pratense HOM05D003945 ORTHO05D004625 0.0e+00 1112.1 769 73.6
Pp3c15_10300 Physcomitrium patens HOM05D003945 ORTHO05D004625 0.0e+00 1088.9 824 68.4
Pp3c9_8900 Physcomitrium patens HOM05D003945 ORTHO05D004625 0.0e+00 1083.6 829 67.2
CSS0002441 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 7.7e-297 1023.8 589 84.4
Oeu019083.2 Olea europaea HOM05D003945 ORTHO05D004625 1.1e-292 1010.0 825 67.3
AagrBONN_evm.TU.Sc2ySwM_228.1369 Anthoceros agrestis HOM05D003945 ORTHO05D004625 3.5e-265 918.7 600 72.3
COL.COLO4_26375 Corchorus olitorius HOM05D003945 ORTHO05D004625 1.5e-260 903.3 534 83.5
SHI08218 Sapria himalayana HOM05D003945 ORTHO05D004625 1.6e-257 893.3 593 74.2
TAR625G1327 Trochodendron aralioides HOM05D003945 ORTHO05D004625 2.6e-252 875.9 828 61.1
ClCG08G015350 Citrullus lanatus HOM05D003945 ORTHO05D004625 9.5e-247 857.4 545 82.0
TAR625G0556 Trochodendron aralioides HOM05D003945 ORTHO05D004625 6.9e-173 612.1 720 51.4
Actinidia15302 Actinidia chinensis HOM05D003945 ORTHO05D004625 3.0e-152 543.5 360 83.9
unitig_899.g15618 Utricularia gibba HOM05D003945 ORTHO05D004625 1.3e-147 528.1 472 57.2
Actinidia15303 Actinidia chinensis HOM05D003945 ORTHO05D004625 1.6e-145 521.2 313 83.1
unitig_899.g15619 Utricularia gibba HOM05D003945 ORTHO05D004625 3.4e-103 380.6 314 72.0
TAR625G0675 Trochodendron aralioides HOM05D003945 ORTHO05D004625 7.3e-98 362.8 395 53.9
HanXRQChr02g0037151 Helianthus annuus HOM05D003945 ORTHO05D004625 8.1e-97 359.4 272 68.0
TAR625G1534 Trochodendron aralioides HOM05D003945 ORTHO05D004625 9.0e-80 302.8 582 43.1
Pp3c1_5980 Physcomitrium patens HOM05D003945 ORTHO05D004625 2.3e-59 235.0 156 76.9
arahy.Tifrunner.gnm1.ann1.URD35Y Arachis hypogaea HOM05D003945 ORTHO05D004625 2.7e-52 211.5 140 73.6
SGA_v2.0_scaffold18G08518 Striga asiatica HOM05D003945 ORTHO05D004625 2.5e-45 188.3 163 58.3
CBR_g2789 Chara braunii HOM05D003945 ORTHO05D004625 4.0e-35 154.5 500 29.2
PRCOL_00003766 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 9.1e-32 143.3 460 27.2
DCAR_031552 Daucus carota HOM05D003945 ORTHO05D004625 7.7e-31 140.2 76 85.5
PRCOL_00006675 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 5.5e-29 134.0 456 27.0
TAR625G0971 Trochodendron aralioides HOM05D003945 ORTHO05D004625 4.7e-28 131.0 104 62.5
Cre01.g001400 Chlamydomonas reinhardtii HOM05D003945 ORTHO05D004625 4.0e-27 127.9 431 28.3
Pp3c1_5940 Physcomitrium patens HOM05D003945 ORTHO05D004625 1.3e-25 122.9 96 68.8
CiPaw.15G072700 Carya illinoinensis HOM05D003945 ORTHO05D004625 3.7e-25 121.3 68 85.3
PRCOL_00001495 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 7.0e-24 117.1 469 26.0
TPR.G27891 Trifolium pratense HOM05D003945 ORTHO05D004625 1.2e-20 106.3 62 77.4
CBR_g38919 Chara braunii HOM05D000019 ORTHO05D000353 2.9e-17 95.1 220 33.6
CBR_g32472 Chara braunii HOM05D000019 ORTHO05D000002 5.4e-16 90.9 266 27.4
arahy.Tifrunner.gnm1.ann1.4NEG3Q Arachis hypogaea HOM05D003945 ORTHO05D004625 1.4e-11 76.3 76 50.0
SGA_v2.0_scaffold210G42079 Striga asiatica HOM05D003945 ORTHO05D004625 2.9e-09 68.6 166 31.9
CBR_g37162 Chara braunii HOM05D000019 ORTHO05D000048 5.4e-08 64.3 102 38.2
Lsat_1_v5_gn_5_96440 Lactuca sativa HOM05D003945 ORTHO05D004625 3.0e-06 58.5 38 73.7


User provided reference genes

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