Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21563 Vaccinium macrocarpon HOM05D003475 ORTHO05D004155 1.7e-102 375.9 179 100.0
vmacro21560 Vaccinium macrocarpon HOM05D003475 ORTHO05D004155 1.4e-56 223.4 151 72.2
Rhsim06G0046300 Rhododendron simsii HOM05D003475 ORTHO05D004155 2.2e-54 216.1 151 69.5
Actinidia15262 Actinidia chinensis HOM05D003475 ORTHO05D004155 2.7e-52 209.1 151 68.2
Atru.chr13.624 Acer truncatum HOM05D003475 ORTHO05D004155 2.3e-51 206.1 151 64.9
Solyc04g049630.3 Solanum lycopersicum HOM05D003475 ORTHO05D004155 1.9e-50 203.0 183 56.8
FAN20G0705 Fragaria x ananassa HOM05D003475 ORTHO05D004155 3.3e-50 202.2 178 56.7
TAR381G1600 Trochodendron aralioides HOM05D003475 ORTHO05D004155 3.3e-50 202.2 151 64.2
Oeu032239.1 Olea europaea HOM05D003475 ORTHO05D004155 4.3e-50 201.8 151 65.6
Dinv36000 Davidia involucrata HOM05D003475 ORTHO05D004155 5.7e-50 201.4 151 65.6
Sopen04g019770 Solanum pennellii HOM05D003475 ORTHO05D004155 7.4e-50 201.1 183 56.3
Gorai.010G016900 Gossypium raimondii HOM05D003475 ORTHO05D004155 1.3e-49 200.3 152 61.8
FvH4_2g34950 Fragaria vesca HOM05D003475 ORTHO05D004155 2.2e-49 199.5 154 61.0
Gohir.D06G014300 Gossypium hirsutum HOM05D003475 ORTHO05D004155 2.8e-49 199.1 152 61.8
CiPaw.15G063700 Carya illinoinensis HOM05D003475 ORTHO05D004155 3.7e-49 198.7 154 63.0
FAN15G0079 Fragaria x ananassa HOM05D003475 ORTHO05D004155 3.7e-49 198.7 178 56.2
MD08G1107200 Malus domestica HOM05D003475 ORTHO05D004155 3.7e-49 198.7 189 52.4
FAN27G1383 Fragaria x ananassa HOM05D003475 ORTHO05D004155 6.3e-49 198.0 178 55.1
Gohir.A06G016100 Gossypium hirsutum HOM05D003475 ORTHO05D004155 6.3e-49 198.0 143 65.0
QL02p006064 Quercus lobata HOM05D003475 ORTHO05D004155 6.3e-49 198.0 144 64.6
Cc10_g03890 Coffea canephora HOM05D003475 ORTHO05D004155 1.1e-48 197.2 151 62.3
Cfa018505 Carpinus fangiana HOM05D003475 ORTHO05D004155 1.4e-48 196.8 147 65.3
Duzib116G0360 Durio zibethinus HOM05D003475 ORTHO05D004155 1.4e-48 196.8 151 64.2
MD15G1087800 Malus domestica HOM05D003475 ORTHO05D004155 1.4e-48 196.8 154 60.4
Potri.002G128700 Populus trichocarpa HOM05D003475 ORTHO05D004155 1.8e-48 196.4 151 63.6
GSVIVG01009564001 Vitis vinifera HOM05D003475 ORTHO05D004155 1.8e-48 196.4 144 66.7
Nitab4.5_0003438g0010 Nicotiana tabacum HOM05D003475 ORTHO05D004155 3.1e-48 195.7 178 55.1
RcHm_v2.0_Chr6g0307051 Rosa chinensis HOM05D003475 ORTHO05D004155 9.0e-48 194.1 154 59.1
Thecc.08G013900 Theobroma cacao HOM05D003475 ORTHO05D004155 1.5e-47 193.4 152 61.2
MSTRG.25109 Avicennia marina HOM05D003475 ORTHO05D004155 2.0e-47 193.0 147 61.9
Nitab4.5_0004930g0010 Nicotiana tabacum HOM05D003475 ORTHO05D004155 2.0e-47 193.0 157 60.5
Ciclev10003676m.g Citrus clementina HOM05D003475 ORTHO05D004155 2.6e-47 192.6 144 64.6
TWI56G0590 Tripterygium wilfordii HOM05D003475 ORTHO05D004155 2.6e-47 192.6 155 58.7
Migut.C00608 Erythranthe guttata HOM05D003475 ORTHO05D004155 4.5e-47 191.8 144 63.2
Peaxi162Scf00929g00519 Petunia axillaris HOM05D003475 ORTHO05D004155 7.7e-47 191.0 147 62.6
Prupe.1G441500 Prunus persica HOM05D003475 ORTHO05D004155 1.3e-46 190.3 153 60.1
MELO3C016729.2 Cucumis melo HOM05D003475 ORTHO05D004155 2.2e-46 189.5 153 58.8
Lj4C50T5 Lonicera japonica HOM05D003475 ORTHO05D004155 2.2e-46 189.5 155 61.9
Nn5g30184 Nelumbo nucifera HOM05D003475 ORTHO05D004155 2.2e-46 189.5 144 63.2
CANSAT25G2609 Cannabis sativa HOM05D003475 ORTHO05D004155 2.9e-46 189.1 144 63.2
CsaV3_4G034070 Cucumis sativus L. HOM05D003475 ORTHO05D004155 3.8e-46 188.7 153 59.5
GSVIVG01009565001 Vitis vinifera HOM05D003475 ORTHO05D004155 3.8e-46 188.7 146 63.0
Hma1.2p1_0260F.1_g104710 Hydrangea macrophylla HOM05D003475 ORTHO05D004155 5.0e-46 188.3 151 62.9
Eucgr.F00026 Eucalyptus grandis HOM05D003475 ORTHO05D004155 6.5e-46 188.0 151 60.3
Eucgr.F00028 Eucalyptus grandis HOM05D003475 ORTHO05D004155 8.5e-46 187.6 154 57.8
Medtr3g051310 Medicago truncatula HOM05D003475 ORTHO05D004155 8.5e-46 187.6 146 61.6
Eucgr.F00027 Eucalyptus grandis HOM05D003475 ORTHO05D004155 1.4e-45 186.8 154 57.8
Manes.18G034500 Manihot esculenta HOM05D003475 ORTHO05D004155 1.4e-45 186.8 151 59.6
TPR.G16593 Trifolium pratense HOM05D003475 ORTHO05D004155 1.9e-45 186.4 146 61.6
Glyma.08G315400 Glycine max HOM05D003475 ORTHO05D004155 2.5e-45 186.0 150 59.3
Lsat_1_v5_gn_6_33061 Lactuca sativa HOM05D003475 ORTHO05D004155 3.2e-45 185.7 144 61.8
ClCG05G019590 Citrullus lanatus HOM05D003475 ORTHO05D004155 4.2e-45 185.3 147 61.9
SGA_v2.0_scaffold217G42435 Striga asiatica HOM05D003475 ORTHO05D004155 4.2e-45 185.3 168 54.8
HanXRQChr11g0349621 Helianthus annuus HOM05D003475 ORTHO05D004155 5.5e-45 184.9 151 59.6
Phvul.006G042600 Phaseolus vulgaris HOM05D003475 ORTHO05D004155 5.5e-45 184.9 144 60.4
Haze_17571 Corylus avellana HOM05D003475 ORTHO05D004155 1.2e-44 183.7 167 58.1
TWI56G1470 Tripterygium wilfordii HOM05D003475 ORTHO05D004155 1.2e-44 183.7 154 58.4
Lj6g0027326 Lotus japonicus HOM05D003475 ORTHO05D004155 1.6e-44 183.3 154 58.4
SalBow7G2818 Salvia bowleyana HOM05D003475 ORTHO05D004155 1.6e-44 183.3 151 58.9
Ca_05516_v3 Cicer arietinum L. HOM05D003475 ORTHO05D004155 2.7e-44 182.6 146 60.3
Lalb_Chr18g0049301 Lupinus albus HOM05D003475 ORTHO05D004155 2.7e-44 182.6 156 56.4
Cpa.g.c26337.1 Carica papaya HOM05D003475 ORTHO05D004155 4.6e-44 181.8 146 61.0
arahy.Tifrunner.gnm1.ann1.VT20D2 Arachis hypogaea HOM05D003475 ORTHO05D004155 6.1e-44 181.4 140 60.0
Thhalv10003712m.g Eutrema salsugineum HOM05D003475 ORTHO05D004155 7.9e-44 181.0 140 64.3
Phvul.006G042700 Phaseolus vulgaris HOM05D003475 ORTHO05D004155 1.0e-43 180.6 146 58.9
arahy.Tifrunner.gnm1.ann1.W6GX7N Arachis hypogaea HOM05D003475 ORTHO05D004155 1.4e-43 180.3 140 60.0
CsaV3_4G034080 Cucumis sativus L. HOM05D003475 ORTHO05D004155 1.4e-43 180.3 148 60.8
VMungo0540G2323 Vigna mungo HOM05D003475 ORTHO05D004155 1.4e-43 180.3 144 59.0
A08p00170 Brassica napus HOM05D003475 ORTHO05D004155 2.3e-43 179.5 143 60.8
BraA08t32073Z Brassica rapa HOM05D003475 ORTHO05D004155 2.3e-43 179.5 143 60.8
DCAR_008786 Daucus carota HOM05D003475 ORTHO05D004155 2.3e-43 179.5 140 61.4
PSO541G5638 Papaver somniferum HOM05D003475 ORTHO05D004155 2.3e-43 179.5 148 60.1
PGR083G1228 Punica granatum HOM05D003475 ORTHO05D004155 2.3e-43 179.5 154 55.8
ECA248G1217 Erigeron canadensis HOM05D003475 ORTHO05D004155 3.0e-43 179.1 144 59.7
Lsat_1_v5_gn_1_54780 Lactuca sativa HOM05D003475 ORTHO05D004155 3.0e-43 179.1 155 56.1
PSO675G3306 Papaver somniferum HOM05D003475 ORTHO05D004155 3.0e-43 179.1 148 60.1
Sp7g05960 Schrenkiella parvula HOM05D003475 ORTHO05D004155 3.9e-43 178.7 145 62.1
EL10Ac1g01808 Beta vulgaris HOM05D003475 ORTHO05D004155 6.7e-43 177.9 140 60.0
CSS0007643 Camellia sinensis var. sinensis HOM05D003475 ORTHO05D004155 8.8e-43 177.6 144 62.5
Glyma.18G098400 Glycine max HOM05D003475 ORTHO05D004155 8.8e-43 177.6 146 58.9
Sed0005929 Sechium edule HOM05D003475 ORTHO05D004155 1.1e-42 177.2 140 60.0
Hund26615 Selenicereus undatus HOM05D003475 ORTHO05D004155 1.1e-42 177.2 151 56.3
THA.LOC104821889 Tarenaya hassleriana HOM05D003475 ORTHO05D004155 1.1e-42 177.2 147 58.5
Aa31LG9G17910 Aethionema arabicum HOM05D003475 ORTHO05D004155 2.5e-42 176.0 145 60.7
Sc02g0006850 Simmondsia chinensis HOM05D003475 ORTHO05D004155 2.5e-42 176.0 144 56.2
AL7G45140 Arabidopsis lyrata HOM05D003475 ORTHO05D004155 4.3e-42 175.3 140 62.1
C03p93340 Brassica napus HOM05D003475 ORTHO05D004155 4.3e-42 175.3 147 58.5
COL.COLO4_26452 Corchorus olitorius HOM05D003475 ORTHO05D004155 4.3e-42 175.3 154 57.8
AUR62022463 Chenopodium quinoa HOM05D003475 ORTHO05D004155 5.7e-42 174.9 173 54.9
FvH4_2g34941 Fragaria vesca HOM05D003475 ORTHO05D004155 5.7e-42 174.9 144 58.3
BolC3t21632H Brassica oleracea HOM05D003475 ORTHO05D004155 9.7e-42 174.1 148 57.4
ECA233G1971 Erigeron canadensis HOM05D003475 ORTHO05D004155 1.3e-41 173.7 146 60.3
FAN27G2115 Fragaria x ananassa HOM05D003475 ORTHO05D004155 1.3e-41 173.7 144 58.3
arahy.Tifrunner.gnm1.ann1.Y23KDA Arachis hypogaea HOM05D003475 ORTHO05D004155 1.7e-41 173.3 146 56.8
Hma1.2p1_1543F.1_g289760 Hydrangea macrophylla HOM05D003475 ORTHO05D004155 1.7e-41 173.3 150 56.7
Ah.11g043410 Amaranthus hybridus HOM05D003475 ORTHO05D004155 2.8e-41 172.6 148 56.1
FAN20G3001 Fragaria x ananassa HOM05D003475 ORTHO05D004155 3.7e-41 172.2 144 58.3
THA.LOC104823807 Tarenaya hassleriana HOM05D003475 ORTHO05D004155 3.7e-41 172.2 156 54.5
AT5G36210 Arabidopsis thaliana HOM05D003475 ORTHO05D004155 6.3e-41 171.4 140 61.4
arahy.Tifrunner.gnm1.ann1.DEGU9R Arachis hypogaea HOM05D003475 ORTHO05D004155 8.2e-41 171.0 146 56.2
CARHR216560 Cardamine hirsuta HOM05D003475 ORTHO05D004155 8.2e-41 171.0 140 61.4
SHI08311 Sapria himalayana HOM05D003475 ORTHO05D004155 8.2e-41 171.0 163 52.8
HanXRQChr13g0399111 Helianthus annuus HOM05D003475 ORTHO05D004155 1.1e-40 170.6 145 58.6
CDE06G0513 Ceratophyllum demersum HOM05D003475 ORTHO05D004155 1.8e-40 169.9 144 58.3
AUR62040061 Chenopodium quinoa HOM05D003475 ORTHO05D004155 1.8e-40 169.9 154 56.5
Cc10_g03900 Coffea canephora HOM05D003475 ORTHO05D004155 2.4e-40 169.5 151 53.6
VMungo0540G0248 Vigna mungo HOM05D003475 ORTHO05D004155 2.4e-40 169.5 146 57.5
Nitab4.5_0000876g0160 Nicotiana tabacum HOM05D003475 ORTHO05D004155 3.1e-40 169.1 139 56.8
Nitab4.5_0002673g0070 Nicotiana tabacum HOM05D003475 ORTHO05D004155 3.1e-40 169.1 140 55.7
Actinidia27942 Actinidia chinensis HOM05D003475 ORTHO05D004155 6.9e-40 167.9 153 54.9
PGSC0003DMG400008244 Solanum tuberosum HOM05D003475 ORTHO05D004155 9.1e-40 167.5 141 54.6
Dinv42129 Davidia involucrata HOM05D003475 ORTHO05D004155 1.2e-39 167.2 153 54.2
PSO675G3178 Papaver somniferum HOM05D003475 ORTHO05D004155 1.2e-39 167.2 145 56.6
Sopen10g022400 Solanum pennellii HOM05D003475 ORTHO05D004155 1.2e-39 167.2 141 54.6
Carub.0007s3188 Capsella rubella HOM05D003475 ORTHO05D004155 2.0e-39 166.4 140 60.7
CAN.G1288.14 Capsicum annuum HOM05D003475 ORTHO05D004155 2.0e-39 166.4 140 54.3
Solyc10g050840.3 Solanum lycopersicum HOM05D003475 ORTHO05D004155 4.5e-39 165.2 141 54.6
Aqoxy6G01420 Aquilegia oxysepala HOM05D003475 ORTHO05D004155 1.0e-38 164.1 145 54.5
Lj9A359T75 Lonicera japonica HOM05D003475 ORTHO05D004155 1.7e-38 163.3 147 52.4
CSS0002070 Camellia sinensis var. sinensis HOM05D003475 ORTHO05D004155 6.5e-38 161.4 152 52.6
Os06g0215300 Oryza sativa ssp. japonica HOM05D003475 ORTHO05D004155 6.5e-38 161.4 150 54.0
ATR0097G003 Amborella trichopoda HOM05D003475 ORTHO05D004155 1.9e-37 159.8 150 51.3
Sabra02G0100800 Salix brachista HOM05D003475 ORTHO05D004155 1.9e-37 159.8 151 55.0
PSO675G9051 Papaver somniferum HOM05D003475 ORTHO05D004155 4.2e-37 158.7 153 52.3
SEGI_11952 Sequoiadendron giganteum HOM05D003475 ORTHO05D004155 9.4e-37 157.5 144 53.5
Aqoxy6G01419 Aquilegia oxysepala HOM05D003475 ORTHO05D004155 3.6e-36 155.6 142 52.8
DCAR_003620 Daucus carota HOM05D003475 ORTHO05D004155 4.7e-36 155.2 144 51.4
Zm00001eb373080 Zea mays HOM05D003475 ORTHO05D004155 1.8e-35 153.3 143 52.4
SEGI_19056 Sequoiadendron giganteum HOM05D003475 ORTHO05D004155 2.3e-35 152.9 147 49.7
Pp3c1_10400 Physcomitrium patens HOM05D003475 ORTHO05D004155 3.9e-35 152.1 146 51.4
CSS0021204 Camellia sinensis var. sinensis HOM05D003475 ORTHO05D004155 1.1e-34 150.6 144 52.1
HPP92_004258 Vanilla planifolia HOM05D003475 ORTHO05D004155 2.0e-34 149.8 151 49.7
HPP92_004236 Vanilla planifolia HOM05D003475 ORTHO05D004155 2.6e-34 149.4 151 49.7
Psat4g195440 Pisum sativum HOM05D003475 ORTHO05D004155 3.1e-32 142.5 113 61.9
Os06g0215400 Oryza sativa ssp. japonica HOM05D003475 ORTHO05D004155 7.0e-32 141.4 148 48.0
CsaV3_4G034060 Cucumis sativus L. HOM05D003475 ORTHO05D004155 9.1e-32 141.0 116 57.8
Sc08g0000080 Simmondsia chinensis HOM05D003475 ORTHO05D004155 1.5e-31 140.2 147 47.6
Eucgr.F00025 Eucalyptus grandis HOM05D003475 ORTHO05D004155 7.7e-31 137.9 131 53.4
Zm00001eb373040 Zea mays HOM05D003475 ORTHO05D004155 2.2e-30 136.3 150 46.7
SMO361G0429 Selaginella moellendorffii HOM05D003475 ORTHO05D004155 1.1e-29 134.0 144 46.5
vmacro19485 Vaccinium macrocarpon HOM05D003475 ORTHO05D004155 1.5e-29 133.7 230 35.7
Mapoly0002s0297 Marchantia polymorpha HOM05D003475 ORTHO05D004155 2.7e-28 129.4 140 45.7
MBI02_g21206_MAGBIO Magnolia biondii HOM05D003475 ORTHO05D004155 4.7e-28 128.6 118 53.4
MD08G1107100 Malus domestica HOM05D003475 ORTHO05D004155 6.1e-28 128.3 178 42.1
Peaxi162Scf00003g01723 Petunia axillaris HOM05D003475 ORTHO05D004155 2.6e-26 122.9 141 45.4
CBR_g23970 Chara braunii HOM05D003475 ORTHO05D004155 7.0e-24 114.8 176 35.8
CAN.G57.17 Capsicum annuum HOM05D003475 ORTHO05D004155 4.5e-23 112.1 116 49.1
FAN15G1851 Fragaria x ananassa HOM05D003475 ORTHO05D004155 1.8e-19 100.1 165 37.0
Cre10.g423300 Chlamydomonas reinhardtii HOM05D003475 ORTHO05D004155 6.5e-14 81.6 103 42.7
Psat5g145000 Pisum sativum HOM05D003475 ORTHO05D004155 3.2e-13 79.3 77 53.2
Prupe.1G441400 Prunus persica HOM05D003475 ORTHO05D004155 2.1e-12 76.6 91 46.2
PRCOL_00005577 Prasinoderma coloniale HOM05D003475 ORTHO05D004155 4.7e-12 75.5 129 33.3
Psat5g180320 Pisum sativum HOM05D003475 ORTHO05D004155 1.3e-09 67.4 46 63.0
SEGI_00433 Sequoiadendron giganteum HOM05D003475 ORTHO05D004155 3.5e-07 59.3 53 54.7
DCAR_023532 Daucus carota HOM05D003475 ORTHO05D004155 4.5e-07 58.9 53 52.8


User provided reference genes

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