Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21426 Vaccinium macrocarpon HOM05D006117 ORTHO05D007996 5.3e-130 467.6 222 100.0
Rhsim06G0063800 Rhododendron simsii HOM05D006117 ORTHO05D007996 2.8e-67 259.2 135 86.7
Actinidia10214 Actinidia chinensis HOM05D006117 ORTHO05D007996 2.0e-60 236.5 134 78.4
CSS0015427 Camellia sinensis var. sinensis HOM05D006117 ORTHO05D007996 7.0e-50 201.4 134 72.4
CSS0025391 Camellia sinensis var. sinensis HOM05D006117 ORTHO05D007996 7.0e-50 201.4 134 72.4
CSS0008179 Camellia sinensis var. sinensis HOM05D006117 ORTHO05D007996 5.9e-49 198.4 133 69.2
CSS0023541 Camellia sinensis var. sinensis HOM05D006117 ORTHO05D007996 7.8e-49 198.0 133 69.2
CiPaw.08G051200 Carya illinoinensis HOM05D006117 ORTHO05D007996 1.3e-48 197.2 127 70.1
Cfa013754 Carpinus fangiana HOM05D006117 ORTHO05D007996 6.6e-48 194.9 125 70.4
Thecc.08G085800 Theobroma cacao HOM05D006117 ORTHO05D007996 1.5e-47 193.7 131 69.5
FAN20G1172 Fragaria x ananassa HOM05D006117 ORTHO05D007996 7.3e-47 191.4 119 71.4
Sabra14G0008600 Salix brachista HOM05D006117 ORTHO05D007996 9.5e-47 191.0 186 52.7
FvH4_2g32820 Fragaria vesca HOM05D006117 ORTHO05D007996 1.2e-46 190.7 119 71.4
FAN15G1845 Fragaria x ananassa HOM05D006117 ORTHO05D007996 1.2e-46 190.7 119 71.4
FAN24G1443 Fragaria x ananassa HOM05D006117 ORTHO05D007996 1.2e-46 190.7 119 71.4
Haze_22413 Corylus avellana HOM05D006117 ORTHO05D007996 1.6e-46 190.3 125 68.8
Lj4C73T15 Lonicera japonica HOM05D006117 ORTHO05D007996 1.6e-46 190.3 128 67.2
Prupe.1G420700 Prunus persica HOM05D006117 ORTHO05D007996 2.1e-46 189.9 120 68.3
RcHm_v2.0_Chr6g0309881 Rosa chinensis HOM05D006117 ORTHO05D007996 2.1e-46 189.9 121 67.8
Dinv39211 Davidia involucrata HOM05D006117 ORTHO05D007996 2.8e-46 189.5 137 64.2
COL.COLO4_28476 Corchorus olitorius HOM05D006117 ORTHO05D007996 6.2e-46 188.3 131 64.1
QL12p038374 Quercus lobata HOM05D006117 ORTHO05D007996 1.4e-45 187.2 121 66.9
Gohir.D05G214600 Gossypium hirsutum HOM05D006117 ORTHO05D007996 1.8e-45 186.8 131 66.4
GSVIVG01009315001 Vitis vinifera HOM05D006117 ORTHO05D007996 1.8e-45 186.8 133 63.9
CANSAT25G2369 Cannabis sativa HOM05D006117 ORTHO05D007996 3.1e-45 186.0 125 64.8
Gohir.A05G211300 Gossypium hirsutum HOM05D006117 ORTHO05D007996 4.0e-45 185.7 131 66.4
Nitab4.5_0005915g0010 Nicotiana tabacum HOM05D006117 ORTHO05D007996 4.0e-45 185.7 131 64.9
Gorai.009G221300 Gossypium raimondii HOM05D006117 ORTHO05D007996 5.2e-45 185.3 131 66.4
TAR628G0216 Trochodendron aralioides HOM05D006117 ORTHO05D007996 1.2e-44 184.1 131 64.9
Potri.014G014400 Populus trichocarpa HOM05D006117 ORTHO05D007996 1.5e-44 183.7 131 66.4
Duzib093G0384 Durio zibethinus HOM05D006117 ORTHO05D007996 5.8e-44 181.8 131 64.1
Peaxi162Scf00028g00273 Petunia axillaris HOM05D006117 ORTHO05D007996 7.5e-44 181.4 116 69.0
Cc10_g05140 Coffea canephora HOM05D006117 ORTHO05D007996 1.3e-43 180.6 117 68.4
Manes.05G182800 Manihot esculenta HOM05D006117 ORTHO05D007996 1.7e-43 180.3 126 66.7
Atru.chr13.856 Acer truncatum HOM05D006117 ORTHO05D007996 2.2e-43 179.9 131 63.4
Ciclev10001149m.g Citrus clementina HOM05D006117 ORTHO05D007996 3.7e-43 179.1 132 64.4
DCAR_009868 Daucus carota HOM05D006117 ORTHO05D007996 3.7e-43 179.1 123 65.9
ECA232G2767 Erigeron canadensis HOM05D006117 ORTHO05D007996 4.1e-42 175.6 132 61.4
Glyma.06G047700 Glycine max HOM05D006117 ORTHO05D007996 1.6e-41 173.7 136 61.0
HanXRQChr10g0279141 Helianthus annuus HOM05D006117 ORTHO05D007996 1.6e-41 173.7 127 61.4
Hund05287 Selenicereus undatus HOM05D006117 ORTHO05D007996 2.0e-41 173.3 107 72.9
Lj1g0000026 Lotus japonicus HOM05D006117 ORTHO05D007996 3.5e-41 172.6 138 58.0
TWI12G0297 Tripterygium wilfordii HOM05D006117 ORTHO05D007996 4.6e-41 172.2 118 67.8
ClCG08G002010 Citrullus lanatus HOM05D006117 ORTHO05D007996 7.8e-41 171.4 131 59.5
VMungo1309G1718 Vigna mungo HOM05D006117 ORTHO05D007996 1.0e-40 171.0 125 62.4
SalBow7G4164 Salvia bowleyana HOM05D006117 ORTHO05D007996 1.3e-40 170.6 128 60.2
CsaV3_6G002500 Cucumis sativus L. HOM05D006117 ORTHO05D007996 2.3e-40 169.9 126 59.5
PGR031G1695 Punica granatum HOM05D006117 ORTHO05D007996 2.3e-40 169.9 122 63.9
Oeu047247.2 Olea europaea HOM05D006117 ORTHO05D007996 3.9e-40 169.1 124 58.1
Solyc05g050710.3 Solanum lycopersicum HOM05D006117 ORTHO05D007996 3.9e-40 169.1 114 64.0
AUR62037469 Chenopodium quinoa HOM05D006117 ORTHO05D007996 5.0e-40 168.7 157 51.6
Lalb_Chr08g0245231 Lupinus albus HOM05D006117 ORTHO05D007996 5.0e-40 168.7 130 58.5
MELO3C025035.2 Cucumis melo HOM05D006117 ORTHO05D007996 8.6e-40 167.9 123 60.2
AUR62034997 Chenopodium quinoa HOM05D006117 ORTHO05D007996 1.1e-39 167.5 128 60.9
SGA_v2.0_scaffold238G43920 Striga asiatica HOM05D006117 ORTHO05D007996 1.1e-39 167.5 122 60.7
BcaC06g35298 Brassica carinata HOM05D006117 ORTHO05D007996 1.5e-39 167.2 127 58.3
C07p17700 Brassica napus HOM05D006117 ORTHO05D007996 1.5e-39 167.2 127 58.3
BraA07t28958Z Brassica rapa HOM05D006117 ORTHO05D007996 1.5e-39 167.2 130 59.2
A07p11730 Brassica napus HOM05D006117 ORTHO05D007996 1.9e-39 166.8 130 59.2
Thhalv10007681m.g Eutrema salsugineum HOM05D006117 ORTHO05D007996 3.3e-39 166.0 127 60.6
BcaB03g13981 Brassica carinata HOM05D006117 ORTHO05D007996 4.3e-39 165.6 125 58.4
Migut.C00400 Erythranthe guttata HOM05D006117 ORTHO05D007996 5.6e-39 165.2 128 54.7
FAN27G0951 Fragaria x ananassa HOM05D006117 ORTHO05D007996 5.6e-39 165.2 119 65.5
Lsat_1_v5_gn_9_81040 Lactuca sativa HOM05D006117 ORTHO05D007996 5.6e-39 165.2 125 60.8
Phvul.009G073200 Phaseolus vulgaris HOM05D006117 ORTHO05D007996 7.3e-39 164.9 123 59.3
Sed0008074 Sechium edule HOM05D006117 ORTHO05D007996 9.5e-39 164.5 134 53.7
PGSC0003DMG400007000 Solanum tuberosum HOM05D006117 ORTHO05D007996 9.5e-39 164.5 114 62.3
Ca_15895_v3 Cicer arietinum L. HOM05D006117 ORTHO05D007996 1.6e-38 163.7 133 58.6
Psat5g038440 Pisum sativum HOM05D006117 ORTHO05D007996 2.8e-38 162.9 126 60.3
Lalb_Chr08g0245261 Lupinus albus HOM05D006117 ORTHO05D007996 4.7e-38 162.2 130 55.4
Eucgr.F02231 Eucalyptus grandis HOM05D006117 ORTHO05D007996 6.2e-38 161.8 118 63.6
AL1G40910 Arabidopsis lyrata HOM05D006117 ORTHO05D007996 8.1e-38 161.4 122 59.8
Sp1g23730 Schrenkiella parvula HOM05D006117 ORTHO05D007996 8.1e-38 161.4 117 60.7
AT1G27480 Arabidopsis thaliana HOM05D006117 ORTHO05D007996 1.4e-37 160.6 127 55.9
CAN.G112.13 Capsicum annuum HOM05D006117 ORTHO05D007996 1.4e-37 160.6 122 56.6
MSTRG.1022 Avicennia marina HOM05D006117 ORTHO05D007996 1.8e-37 160.2 126 55.6
Medtr3g103300 Medicago truncatula HOM05D006117 ORTHO05D007996 2.3e-37 159.8 128 57.8
Nn5g30637 Nelumbo nucifera HOM05D006117 ORTHO05D007996 5.2e-37 158.7 133 56.4
unitig_26.g9869 Utricularia gibba HOM05D006117 ORTHO05D007996 5.2e-37 158.7 129 52.7
Aqoxy6G02537 Aquilegia oxysepala HOM05D006117 ORTHO05D007996 1.2e-36 157.5 126 59.5
arahy.Tifrunner.gnm1.ann1.6JMM3R Arachis hypogaea HOM05D006117 ORTHO05D007996 1.2e-36 157.5 107 64.5
arahy.Tifrunner.gnm1.ann1.NM5DTL Arachis hypogaea HOM05D006117 ORTHO05D007996 1.2e-36 157.5 104 65.4
Carub.0001s2604 Capsella rubella HOM05D006117 ORTHO05D007996 1.5e-36 157.1 125 56.8
EL10Ac1g02358 Beta vulgaris HOM05D006117 ORTHO05D007996 4.4e-36 155.6 122 61.5
CARHR027100 Cardamine hirsuta HOM05D006117 ORTHO05D007996 4.4e-36 155.6 122 57.4
MBI16_g39105_MAGBIO Magnolia biondii HOM05D006117 ORTHO05D007996 9.8e-36 154.5 119 60.5
Ah.05g167020 Amaranthus hybridus HOM05D006117 ORTHO05D007996 3.7e-35 152.5 109 64.2
Sc15g0005470 Simmondsia chinensis HOM05D006117 ORTHO05D007996 4.9e-35 152.1 126 57.1
THA.LOC104807059 Tarenaya hassleriana HOM05D006117 ORTHO05D007996 8.3e-35 151.4 121 61.2
ATR0739G169 Amborella trichopoda HOM05D006117 ORTHO05D007996 3.2e-34 149.4 120 56.7
Os03g0730000 Oryza sativa ssp. japonica HOM05D006117 ORTHO05D007996 3.2e-34 149.4 103 67.0
Aa31LG7G10150 Aethionema arabicum HOM05D006117 ORTHO05D007996 1.2e-33 147.5 126 59.5
SEGI_31593 Sequoiadendron giganteum HOM05D006117 ORTHO05D007996 3.9e-32 142.5 102 61.8
PSO675G0076 Papaver somniferum HOM05D006117 ORTHO05D007996 5.1e-32 142.1 118 58.5
CDE07G1235 Ceratophyllum demersum HOM05D006117 ORTHO05D007996 1.4e-29 134.0 119 54.6
Mapoly0123s0013 Marchantia polymorpha HOM05D006117 ORTHO05D007996 1.7e-24 117.1 103 51.5
Pp3c2_14510 Physcomitrium patens HOM05D006117 ORTHO05D007996 1.1e-21 107.8 104 48.1
AagrBONN_evm.TU.Sc2ySwM_344.1796 Anthoceros agrestis HOM05D006117 ORTHO05D007996 2.0e-20 103.6 147 38.8
Os03g0232800 Oryza sativa ssp. japonica HOM05D006117 ORTHO05D007996 6.4e-19 98.6 105 47.6
SMO347G0464 Selaginella moellendorffii HOM05D006117 ORTHO05D007996 1.1e-18 97.8 103 42.7
Zm00001eb096400 Zea mays HOM05D006117 ORTHO05D007996 7.1e-18 95.1 103 46.6
Os10g0163370 Oryza sativa ssp. japonica HOM05D006117 ORTHO05D007996 4.6e-17 92.4 124 41.9
Zm00001eb096490 Zea mays HOM05D006117 ORTHO05D007996 6.0e-17 92.0 103 45.6
Zm00001eb025570 Zea mays HOM05D006117 ORTHO05D007996 1.0e-16 91.3 140 39.3
Os02g0590400 Oryza sativa ssp. japonica HOM05D006117 ORTHO05D007996 1.7e-16 90.5 101 47.5
Zm00001eb124520 Zea mays HOM05D006117 ORTHO05D007996 6.6e-16 88.6 99 50.5
Os02g0589000 Oryza sativa ssp. japonica HOM05D006117 ORTHO05D007996 1.1e-15 87.8 95 47.4
Os02g0589700 Oryza sativa ssp. japonica HOM05D006117 ORTHO05D007996 1.5e-15 87.4 94 48.9
BolC7t42277H Brassica oleracea HOM05D006117 ORTHO05D007996 3.6e-14 82.8 73 52.1
Zm00001eb096390 Zea mays HOM05D006117 ORTHO05D007996 1.8e-13 80.5 89 46.1
Os02g0590200 Oryza sativa ssp. japonica HOM05D006117 ORTHO05D007996 6.9e-13 78.6 98 46.9
Zm00001eb120460 Zea mays HOM05D006117 ORTHO05D007996 6.9e-13 78.6 97 42.3
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.6e-12 76.6 83 48.2
Rhsim11G0012000 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.2e-11 73.6 83 50.6
Rhsim11G0015000 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.2e-11 73.6 77 48.1
vmacro05599 Vaccinium macrocarpon HOM05D006746 ORTHO05D007812 2.2e-11 73.6 55 72.7
Rhsim01G0167900 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.9e-11 73.2 82 47.6
Rhsim12G0090800 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.9e-11 73.2 83 48.2
Rhsim02G0143700 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.7e-09 66.6 82 45.1
Rhsim01G0169800 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.5e-07 60.8 90 40.0


User provided reference genes

Program Settings