Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 8.9e-193 676.8 348 100.0
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 7.0e-129 464.5 350 74.3
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.2e-83 314.3 356 52.5
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.7e-66 257.3 353 47.6
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 1.4e-60 237.7 366 45.4
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.1e-52 209.9 392 39.5
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 9.3e-49 198.4 381 36.5
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 6.7e-47 192.2 379 35.6
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 5.7e-46 189.1 375 38.7
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 9.6e-46 188.3 393 36.6
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 8.2e-45 185.3 364 37.1
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.0e-42 178.3 399 36.6
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.7e-42 177.6 343 38.2
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 1.7e-42 177.6 395 36.5
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 7.2e-41 172.2 382 35.1
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 2.1e-40 170.6 351 34.8
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 3.0e-39 166.8 215 47.9
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 8.7e-39 165.2 370 34.9
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 1.1e-38 164.9 346 35.5
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.9e-38 164.1 380 33.7
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 5.7e-38 162.5 341 35.5
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 9.7e-38 161.8 297 40.1
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 1.3e-37 161.4 352 34.7
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 1.1e-36 158.3 359 35.7
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.4e-36 157.9 341 35.5
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 3.1e-36 156.8 376 31.9
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 5.3e-36 156.0 372 35.5
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 6.9e-36 155.6 352 33.8
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 7.7e-35 152.1 378 32.3
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 3.8e-34 149.8 361 32.4
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 6.5e-34 149.1 394 33.2
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 1.4e-33 147.9 374 33.2
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 1.9e-33 147.5 376 33.5
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 1.9e-33 147.5 376 33.5
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 2.5e-33 147.1 364 32.4
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 5.5e-33 146.0 345 34.5
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 5.5e-33 146.0 397 32.2
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.6e-32 144.4 356 32.9
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 8.8e-31 138.7 357 32.8
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 8.8e-31 138.7 325 35.1
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 2.0e-30 137.5 366 32.0
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.3e-30 136.7 371 32.3
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 3.3e-30 136.7 399 32.3
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 5.7e-30 136.0 389 30.6
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 6.3e-29 132.5 366 31.4
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 1.4e-28 131.3 399 31.6
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 1.4e-28 131.3 363 31.1
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 1.8e-28 131.0 371 32.9
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 6.9e-28 129.0 345 30.4
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 2.0e-27 127.5 376 31.4
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.7e-26 124.4 364 31.3
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 6.5e-26 122.5 359 31.2
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.9e-25 120.9 356 30.1
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 1.9e-25 120.9 349 30.7
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.6e-24 117.9 366 30.3
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 2.7e-24 117.1 337 31.2
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 4.7e-24 116.3 362 29.3
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.0e-23 115.2 338 30.8
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 1.0e-23 115.2 356 30.9
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 1.0e-23 115.2 279 34.4
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 1.4e-23 114.8 278 32.0
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 1.4e-23 114.8 330 31.2
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.8e-23 114.4 371 28.8
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 3.0e-23 113.6 336 31.8
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 3.9e-23 113.2 336 31.8
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.2e-23 112.8 336 31.8
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 6.7e-23 112.5 336 31.8
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.6e-22 110.5 348 31.0
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 4.4e-22 109.8 390 31.0
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 4.4e-22 109.8 357 28.3
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 1.1e-20 105.1 336 31.0
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 1.4e-20 104.8 383 28.7
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 2.4e-20 104.0 131 42.7
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 4.1e-20 103.2 350 29.7
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 5.3e-20 102.8 380 29.5
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 9.1e-20 102.1 344 30.2
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 1.2e-19 101.7 364 28.6
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 1.0e-18 98.6 363 29.2
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 1.3e-18 98.2 359 30.4
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 1.3e-18 98.2 251 31.1
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 2.9e-18 97.1 355 28.5
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 6.5e-18 95.9 372 28.2
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 1.5e-17 94.7 362 29.3
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 2.5e-17 94.0 367 27.2
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 7.2e-17 92.4 341 26.4
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 9.4e-17 92.0 344 26.2
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 1.2e-16 91.7 345 28.4
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 2.7e-16 90.5 345 26.7
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 4.7e-16 89.7 115 44.3
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 1.0e-15 88.6 363 28.9
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 1.8e-15 87.8 376 27.7
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 2.3e-15 87.4 215 31.6
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 6.7e-15 85.9 372 26.9
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 2.6e-14 84.0 348 24.4
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.3e-14 83.6 348 25.9
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 4.4e-14 83.2 365 25.5
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 4.4e-14 83.2 357 26.9
COL.COLO4_28465 Corchorus olitorius HOM05D006874 ORTHO05D008334 2.2e-13 80.9 156 41.7
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.8e-13 80.5 189 32.8
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 4.8e-13 79.7 346 29.8
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 1.1e-12 78.6 372 26.9
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 1.8e-12 77.8 352 25.9
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 2.4e-12 77.4 323 25.7
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 5.3e-12 76.3 366 26.8
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 1.2e-11 75.1 348 27.0
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 5.9e-11 72.8 207 28.5
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 1.7e-10 71.2 328 27.1
Gorai.002G136000 Gossypium raimondii HOM05D006874 ORTHO05D008334 6.5e-10 69.3 361 26.0
Gohir.A01G123500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.1e-09 68.6 361 25.8
Lj2g0008576 Lotus japonicus HOM05D023496 ORTHO05D025628 3.2e-09 67.0 358 25.4
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.2e-08 65.1 147 38.1
arahy.Tifrunner.gnm1.ann1.0IC8QA Arachis hypogaea HOM05D006874 ORTHO05D008334 1.6e-08 64.7 251 28.3
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 2.7e-08 63.9 354 25.1
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 2.7e-08 63.9 354 25.1
Thecc.02G119800 Theobroma cacao HOM05D016697 ORTHO05D018163 8.0e-08 62.4 377 24.9
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 4.0e-07 60.1 334 24.3
TAR625G0319 Trochodendron aralioides HOM05D006874 ORTHO05D008334 5.7e-06 56.2 94 40.4
Migut.O00023 Erythranthe guttata HOM05D006874 ORTHO05D008334 7.5e-06 55.8 138 35.5


User provided reference genes

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