Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21383 Vaccinium macrocarpon HOM05D001656 ORTHO05D005043 0.0e+00 1295.8 644 100.0
Rhsim06G0067500 Rhododendron simsii HOM05D001656 ORTHO05D005043 7.4e-310 1066.6 558 94.3
Actinidia10250 Actinidia chinensis HOM05D001656 ORTHO05D005043 1.4e-292 1009.2 558 88.7
Actinidia19273 Actinidia chinensis HOM05D001656 ORTHO05D005043 2.9e-290 1001.5 558 87.6
QL12p040536 Quercus lobata HOM05D001656 ORTHO05D005043 1.4e-276 956.1 556 83.3
TAR381G0234 Trochodendron aralioides HOM05D001656 ORTHO05D005043 1.7e-274 949.1 557 82.8
DCAR_020038 Daucus carota HOM05D001656 ORTHO05D005043 4.7e-272 941.0 558 81.4
GSVIVG01009259001 Vitis vinifera HOM05D001656 ORTHO05D005043 8.9e-271 936.8 557 81.0
Lsat_1_v5_gn_2_121140 Lactuca sativa HOM05D001656 ORTHO05D005043 2.6e-270 935.3 560 81.1
Duzib041G0753 Durio zibethinus HOM05D001656 ORTHO05D005043 1.7e-269 932.6 557 82.2
Ciclev10000739m.g Citrus clementina HOM05D001656 ORTHO05D005043 2.9e-269 931.8 556 80.6
Thecc.08G080000 Theobroma cacao HOM05D001656 ORTHO05D005043 4.9e-269 931.0 557 82.0
Lj4A79T57 Lonicera japonica HOM05D001656 ORTHO05D005043 5.4e-268 927.5 559 80.5
Hma1.2p1_1078F.1_g254805 Hydrangea macrophylla HOM05D001656 ORTHO05D005043 7.0e-268 927.2 558 81.2
Cpa.g.sc160.9 Carica papaya HOM05D001656 ORTHO05D005043 2.0e-267 925.6 556 80.2
Lj4C747T6 Lonicera japonica HOM05D001656 ORTHO05D005043 2.0e-267 925.6 577 79.0
CANSAT25G3831 Cannabis sativa HOM05D001656 ORTHO05D005043 3.5e-267 924.9 559 81.0
Cfa020711 Carpinus fangiana HOM05D001656 ORTHO05D005043 6.0e-267 924.1 554 81.0
Gohir.D05G217900 Gossypium hirsutum HOM05D001656 ORTHO05D005043 6.6e-266 920.6 557 80.6
Gohir.A05G214600 Gossypium hirsutum HOM05D001656 ORTHO05D005043 8.6e-266 920.2 557 80.6
Dinv22032 Davidia involucrata HOM05D001656 ORTHO05D005043 1.9e-265 919.1 525 86.1
Gorai.009G224700 Gossypium raimondii HOM05D001656 ORTHO05D005043 2.5e-265 918.7 557 80.4
COL.COLO4_35356 Corchorus olitorius HOM05D001656 ORTHO05D005043 3.3e-265 918.3 565 80.0
Eucgr.F00471 Eucalyptus grandis HOM05D001656 ORTHO05D005043 1.6e-264 916.0 557 79.0
Haze_19016 Corylus avellana HOM05D001656 ORTHO05D005043 3.6e-264 914.8 554 80.7
CAN.G1801.4 Capsicum annuum HOM05D001656 ORTHO05D005043 4.7e-264 914.4 559 79.4
SalBow7G3472 Salvia bowleyana HOM05D001656 ORTHO05D005043 4.7e-264 914.4 559 80.1
Sed0025136 Sechium edule HOM05D001656 ORTHO05D005043 4.7e-264 914.4 557 80.3
Solyc04g077040.3 Solanum lycopersicum HOM05D001656 ORTHO05D005043 4.7e-264 914.4 560 79.3
Duzib093G1672 Durio zibethinus HOM05D001656 ORTHO05D005043 6.2e-264 914.1 541 83.0
PGSC0003DMG400004938 Solanum tuberosum HOM05D001656 ORTHO05D005043 1.1e-263 913.3 560 79.3
CiPaw.15G153300 Carya illinoinensis HOM05D001656 ORTHO05D005043 2.3e-263 912.1 556 79.3
Ah.11g038980 Amaranthus hybridus HOM05D001656 ORTHO05D005043 5.2e-263 911.0 556 77.7
Nitab4.5_0006011g0010 Nicotiana tabacum HOM05D001656 ORTHO05D005043 5.2e-263 911.0 576 77.4
CsaV3_6G036230 Cucumis sativus L. HOM05D001656 ORTHO05D005043 2.6e-262 908.7 557 79.9
TWI56G0239 Tripterygium wilfordii HOM05D001656 ORTHO05D005043 2.6e-262 908.7 557 78.6
Nitab4.5_0003791g0030 Nicotiana tabacum HOM05D001656 ORTHO05D005043 7.5e-262 907.1 560 78.9
Lalb_Chr11g0064681 Lupinus albus HOM05D001656 ORTHO05D005043 1.7e-261 906.0 557 79.2
MSTRG.915 Avicennia marina HOM05D001656 ORTHO05D005043 2.9e-261 905.2 559 78.4
arahy.Tifrunner.gnm1.ann1.AQ9I9J Arachis hypogaea HOM05D001656 ORTHO05D005043 4.9e-261 904.4 558 78.5
Atru.chr13.919 Acer truncatum HOM05D001656 ORTHO05D005043 1.1e-260 903.3 557 79.9
arahy.Tifrunner.gnm1.ann1.UN376R Arachis hypogaea HOM05D001656 ORTHO05D005043 1.9e-260 902.5 558 78.5
Cc10_g08000 Coffea canephora HOM05D001656 ORTHO05D005043 2.4e-260 902.1 559 78.4
Glyma.04G088400 Glycine max HOM05D001656 ORTHO05D005043 2.4e-260 902.1 559 78.7
Manes.18G053600 Manihot esculenta HOM05D001656 ORTHO05D005043 1.2e-259 899.8 557 77.7
MBI16_g26737_MAGBIO Magnolia biondii HOM05D001656 ORTHO05D005043 4.6e-259 897.9 555 77.5
Solyc04g077030.3 Solanum lycopersicum HOM05D001656 ORTHO05D005043 6.0e-259 897.5 575 76.7
Migut.C00423 Erythranthe guttata HOM05D001656 ORTHO05D005043 2.3e-258 895.6 559 78.4
Potri.019G077600 Populus trichocarpa HOM05D001656 ORTHO05D005043 1.1e-257 893.3 553 77.9
Lj1g0025512 Lotus japonicus HOM05D001656 ORTHO05D005043 2.5e-257 892.1 557 78.5
Nn6g32050 Nelumbo nucifera HOM05D001656 ORTHO05D005043 2.5e-257 892.1 557 77.6
ClCG08G008920 Citrullus lanatus HOM05D001656 ORTHO05D005043 5.6e-257 891.0 557 79.0
THA.LOC104799841 Tarenaya hassleriana HOM05D001656 ORTHO05D005043 1.6e-256 889.4 559 77.5
Aqoxy5G02659 Aquilegia oxysepala HOM05D001656 ORTHO05D005043 4.7e-256 887.9 558 76.3
Nitab4.5_0010814g0010 Nicotiana tabacum HOM05D001656 ORTHO05D005043 1.1e-255 886.7 584 74.8
PGR083G1861 Punica granatum HOM05D001656 ORTHO05D005043 1.8e-255 885.9 557 76.7
CAN.G1801.5 Capsicum annuum HOM05D001656 ORTHO05D005043 3.1e-255 885.2 557 77.2
Oeu035948.1 Olea europaea HOM05D001656 ORTHO05D005043 8.9e-255 883.6 559 77.3
PSO447G0306 Papaver somniferum HOM05D001656 ORTHO05D005043 8.9e-255 883.6 557 76.5
Sopen00g004570 Solanum pennellii HOM05D001656 ORTHO05D005043 1.2e-254 883.2 537 79.7
TWI36G0349 Tripterygium wilfordii HOM05D001656 ORTHO05D005043 2.0e-254 882.5 557 77.2
Cc10_g08010 Coffea canephora HOM05D001656 ORTHO05D005043 3.4e-254 881.7 564 77.3
Medtr3g110710 Medicago truncatula HOM05D001656 ORTHO05D005043 7.5e-254 880.6 557 76.8
AUR62034954 Chenopodium quinoa HOM05D001656 ORTHO05D005043 2.2e-253 879.0 556 76.8
ECA247G3818 Erigeron canadensis HOM05D001656 ORTHO05D005043 2.2e-253 879.0 556 77.2
Sabra19G0088700 Salix brachista HOM05D001656 ORTHO05D005043 2.9e-253 878.6 553 76.7
AUR62035764 Chenopodium quinoa HOM05D001656 ORTHO05D005043 8.3e-253 877.1 556 76.6
FvH4_5g33550 Fragaria vesca HOM05D001656 ORTHO05D005043 2.4e-252 875.5 560 76.6
VMungo1309G0971 Vigna mungo HOM05D001656 ORTHO05D005043 5.4e-252 874.4 557 76.8
Sopen00g003720 Solanum pennellii HOM05D001656 ORTHO05D005043 1.2e-251 873.2 542 78.2
Ca_15555_v3 Cicer arietinum L. HOM05D001656 ORTHO05D005043 1.6e-251 872.8 558 75.8
MSTRG.914 Avicennia marina HOM05D001656 ORTHO05D005043 3.5e-251 871.7 559 75.7
Phvul.009G114000 Phaseolus vulgaris HOM05D001656 ORTHO05D005043 3.5e-251 871.7 558 76.9
Oeu046408.1 Olea europaea HOM05D001656 ORTHO05D005043 3.0e-250 868.6 532 80.1
TPR.G12406 Trifolium pratense HOM05D001656 ORTHO05D005043 3.0e-250 868.6 558 75.8
DCAR_009544 Daucus carota HOM05D001656 ORTHO05D005043 1.9e-249 865.9 558 76.2
SpUn0011_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 2.8e-248 862.1 559 75.1
SpUn0057_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 2.8e-248 862.1 559 75.1
SpUn0134_0020 Schrenkiella parvula HOM05D001656 ORTHO05D005043 2.8e-248 862.1 559 75.1
BcaB01g00958 Brassica carinata HOM05D001656 ORTHO05D005043 3.6e-248 861.7 560 74.5
MD15G1398600 Malus domestica HOM05D001656 ORTHO05D005043 4.7e-248 861.3 560 75.9
Thhalv10013140m.g Eutrema salsugineum HOM05D001656 ORTHO05D005043 1.1e-247 860.1 559 75.1
HanXRQChr02g0046991 Helianthus annuus HOM05D001656 ORTHO05D005043 1.1e-247 860.1 538 77.0
AT5G49650 Arabidopsis thaliana HOM05D001656 ORTHO05D005043 1.4e-247 859.8 559 74.8
Prupe.1G542700 Prunus persica HOM05D001656 ORTHO05D005043 2.4e-247 859.0 560 74.6
AL8G23490 Arabidopsis lyrata HOM05D001656 ORTHO05D005043 4.0e-247 858.2 559 75.0
Peaxi162Scf01174g00119 Petunia axillaris HOM05D001656 ORTHO05D005043 1.2e-246 856.7 515 80.4
RcHm_v2.0_Chr7g0232371 Rosa chinensis HOM05D001656 ORTHO05D005043 1.5e-246 856.3 560 75.0
Carub.0008s0951 Capsella rubella HOM05D001656 ORTHO05D005043 2.0e-246 855.9 559 75.0
ECA232G0787 Erigeron canadensis HOM05D001656 ORTHO05D005043 3.4e-246 855.1 558 75.4
Aa31LG3G8940 Aethionema arabicum HOM05D001656 ORTHO05D005043 3.5e-243 845.1 572 73.3
Os07g0640200 Oryza sativa ssp. japonica HOM05D001656 ORTHO05D005043 1.0e-242 843.6 556 72.8
Zm00001eb109880 Zea mays HOM05D001656 ORTHO05D005043 1.0e-242 843.6 556 72.8
BcaC01g01862 Brassica carinata HOM05D001656 ORTHO05D005043 1.7e-242 842.8 559 73.2
Hund05241 Selenicereus undatus HOM05D001656 ORTHO05D005043 3.3e-241 838.6 599 70.1
FvH4_5g33570 Fragaria vesca HOM05D001656 ORTHO05D005043 7.3e-241 837.4 561 73.4
Hund05240 Selenicereus undatus HOM05D001656 ORTHO05D005043 7.3e-241 837.4 563 72.8
MD08G1210700 Malus domestica HOM05D001656 ORTHO05D005043 9.6e-241 837.0 560 73.9
A06p20550 Brassica napus HOM05D001656 ORTHO05D005043 1.8e-239 832.8 565 72.2
BolC3t19406H Brassica oleracea HOM05D001656 ORTHO05D005043 4.0e-239 831.6 565 72.0
Nitab4.5_0003791g0040 Nicotiana tabacum HOM05D001656 ORTHO05D005043 5.2e-239 831.2 600 70.0
CDE02G2348 Ceratophyllum demersum HOM05D001656 ORTHO05D005043 6.9e-239 830.9 551 73.0
C03p71250 Brassica napus HOM05D001656 ORTHO05D005043 4.4e-238 828.2 577 70.5
ATR0315G023 Amborella trichopoda HOM05D001656 ORTHO05D005043 2.9e-237 825.5 548 71.9
SGA_v2.0_scaffold14G07067 Striga asiatica HOM05D001656 ORTHO05D005043 1.9e-236 822.8 565 72.9
EL10Ac1g02312 Beta vulgaris HOM05D001656 ORTHO05D005043 2.1e-235 819.3 549 70.5
MELO3C019781.2 Cucumis melo HOM05D001656 ORTHO05D005043 2.7e-235 818.9 561 74.2
RcHm_v2.0_Chr7g0232401 Rosa chinensis HOM05D001656 ORTHO05D005043 2.3e-234 815.8 542 73.6
RcHm_v2.0_Chr7g0232391 Rosa chinensis HOM05D001656 ORTHO05D005043 2.6e-230 802.4 562 70.8
EL10Ac1g02313 Beta vulgaris HOM05D001656 ORTHO05D005043 1.6e-227 793.1 556 70.5
Manes.05G186400 Manihot esculenta HOM05D001656 ORTHO05D005043 1.8e-226 789.6 490 77.1
FAN18G4580 Fragaria x ananassa HOM05D001656 ORTHO05D005043 2.5e-225 785.8 562 70.5
FAN18G2419 Fragaria x ananassa HOM05D001656 ORTHO05D003489 4.8e-224 781.6 545 71.9
SEGI_21864 Sequoiadendron giganteum HOM05D001656 ORTHO05D005043 9.9e-222 773.9 553 68.5
Os12g0633000 Oryza sativa ssp. japonica HOM05D001656 ORTHO05D005043 4.9e-221 771.5 561 67.2
PSO210G2052 Papaver somniferum HOM05D001656 ORTHO05D005043 1.4e-220 770.0 488 75.4
FAN08G0520 Fragaria x ananassa HOM05D001656 ORTHO05D003489 1.8e-218 763.1 545 70.6
Nn5g30719 Nelumbo nucifera HOM05D001656 ORTHO05D005043 1.3e-216 756.9 447 81.2
Pp3c13_15890 Physcomitrium patens HOM05D001656 ORTHO05D005043 3.4e-206 722.2 549 63.4
FAN08G2664 Fragaria x ananassa HOM05D001656 ORTHO05D005043 5.1e-202 708.4 565 65.0
MBI16_g05037_MAGBIO Magnolia biondii HOM05D001656 ORTHO05D005043 2.6e-185 652.9 433 74.4
Sc26g0004310 Simmondsia chinensis HOM05D001656 ORTHO05D005043 4.8e-184 648.7 390 79.0
Pp3c4_10480 Physcomitrium patens HOM05D001656 ORTHO05D005043 1.2e-182 644.0 549 56.6
Mapoly0152s0012 Marchantia polymorpha HOM05D001656 ORTHO05D005043 2.6e-182 642.9 545 58.9
Psat5g091440 Pisum sativum HOM05D001656 ORTHO05D005043 6.3e-176 621.7 391 76.2
Sc08g0003410 Simmondsia chinensis HOM05D001656 ORTHO05D005043 1.4e-175 620.5 390 76.7
AagrBONN_evm.TU.Sc2ySwM_228.1076 Anthoceros agrestis HOM05D001656 ORTHO05D005043 4.1e-167 592.4 547 55.4
SMO339G0045 Selaginella moellendorffii HOM05D001656 ORTHO05D005043 4.1e-167 592.4 554 56.9
Dinv44906 Davidia involucrata HOM05D001656 ORTHO05D005043 2.0e-166 590.1 322 88.5
Pp3c4_10497 Physcomitrium patens HOM05D001656 ORTHO05D005043 2.4e-159 566.6 486 56.2
Hma1.2p1_1281F.1_g272610 Hydrangea macrophylla HOM05D001656 ORTHO05D005043 1.8e-146 523.9 290 85.5
Oeu034830.1 Olea europaea HOM05D001656 ORTHO05D005043 4.9e-144 515.8 308 81.8
FAN04G1176 Fragaria x ananassa HOM05D001656 ORTHO05D005043 6.6e-141 505.4 336 73.8
CARHR293240 Cardamine hirsuta HOM05D001656 ORTHO05D005043 7.1e-135 485.3 320 71.9
unitig_736.g22951 Utricularia gibba HOM05D001656 ORTHO05D005043 4.7e-131 472.6 323 69.7
Oeu035949.1 Olea europaea HOM05D001656 ORTHO05D005043 4.4e-121 439.5 270 80.0
AUR62034953 Chenopodium quinoa HOM05D001656 ORTHO05D005043 4.9e-120 436.0 291 70.1
HPP92_028451 Vanilla planifolia HOM05D001656 ORTHO05D005043 6.4e-112 409.1 274 71.5
Oeu011631.2 Olea europaea HOM05D001656 ORTHO05D005043 2.9e-104 383.6 238 80.7
SpUn0078_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 5.5e-103 379.4 246 76.8
HPP92_019867 Vanilla planifolia HOM05D001656 ORTHO05D005043 4.6e-94 349.7 231 74.5
Glyma.06G090401 Glycine max HOM05D001656 ORTHO05D005043 1.5e-89 334.7 240 69.6
CBR_g40751 Chara braunii HOM05D001656 ORTHO05D005043 5.0e-80 303.1 271 57.6
Gorai.013G041400 Gossypium raimondii HOM05D001656 ORTHO05D005043 3.2e-55 220.7 139 75.5
Gohir.D06G145701 Gossypium hirsutum HOM05D001656 ORTHO05D005043 3.6e-54 217.2 137 74.5
Gorai.010G169800 Gossypium raimondii HOM05D001656 ORTHO05D005043 6.1e-54 216.5 138 74.6
Gohir.D13G037000 Gossypium hirsutum HOM05D001656 ORTHO05D005043 1.8e-53 214.9 139 73.4
Atru.chr7.541 Acer truncatum HOM05D001656 ORTHO05D005043 2.3e-53 214.5 179 61.5
unitig_736.g22950 Utricularia gibba HOM05D001656 ORTHO05D005043 3.4e-52 210.7 141 75.9
Gorai.010G172000 Gossypium raimondii HOM05D001656 ORTHO05D005043 1.2e-49 202.2 128 75.0
Dinv26408 Davidia involucrata HOM05D001656 ORTHO05D005043 6.6e-40 169.9 98 80.6
Dinv14696 Davidia involucrata HOM05D001656 ORTHO05D005043 6.1e-38 163.3 98 78.6
Atru.chr13.2595 Acer truncatum HOM05D001656 ORTHO05D005043 4.9e-27 127.1 105 61.9
Cc01_g04230 Coffea canephora HOM05D001656 ORTHO05D005043 2.1e-22 111.7 63 77.8
Cc04_g15120 Coffea canephora HOM05D001656 ORTHO05D005043 2.8e-22 111.3 63 77.8
Cc11_g07750 Coffea canephora HOM05D001656 ORTHO05D005043 1.8e-21 108.6 71 67.6
Cc02_g27750 Coffea canephora HOM05D001656 ORTHO05D005043 6.8e-21 106.7 63 74.6
Gohir.D08G147150 Gossypium hirsutum HOM05D001656 ORTHO05D005043 8.9e-21 106.3 63 77.8
Gorai.004G152700 Gossypium raimondii HOM05D001656 ORTHO05D005043 4.4e-20 104.0 63 76.2
Cre07.g321100 Chlamydomonas reinhardtii HOM05D001656 ORTHO05D014814 1.6e-17 95.5 497 24.7
HanXRQChr08g0210401 Helianthus annuus HOM05D001656 ORTHO05D005043 1.6e-17 95.5 57 70.2
ECA247G1681 Erigeron canadensis HOM05D000257 ORTHO05D008527 1.3e-16 92.4 62 71.0
CBR_g50937 Chara braunii HOM05D001656 ORTHO05D005043 1.7e-16 92.0 245 26.5
Cc08_g09760 Coffea canephora HOM05D001656 ORTHO05D005043 6.2e-14 83.6 54 70.4
MCO10G102 Micromonas commoda HOM05D001656 ORTHO05D014814 1.4e-13 82.4 414 24.9
RcHm_v2.0_Chr2g0168121 Rosa chinensis HOM05D004344 ORTHO05D021344 1.5e-12 79.0 54 61.1
PRCOL_00006907 Prasinoderma coloniale HOM05D013921 ORTHO05D014814 1.1e-10 72.8 527 22.8
ECA247G1273 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-08 65.9 61 49.2
FvH4_5g33600 Fragaria vesca HOM05D001656 ORTHO05D005043 5.6e-07 60.5 49 55.1
FAN18G3130 Fragaria x ananassa HOM05D001656 ORTHO05D005043 5.6e-07 60.5 49 55.1


User provided reference genes

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