Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21373 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 6.2e-102 374.0 175 100.0
MSTRG.24417 Avicennia marina HOM05D005492 ORTHO05D006911 1.9e-98 362.5 174 96.0
MD08G1209200 Malus domestica HOM05D005492 ORTHO05D006911 2.5e-98 362.1 175 94.3
Duzib041G0144 Durio zibethinus HOM05D005492 ORTHO05D006911 4.2e-98 361.3 175 94.3
MD15G1393200 Malus domestica HOM05D005492 ORTHO05D006911 4.2e-98 361.3 175 93.7
Thecc.08G078100 Theobroma cacao HOM05D005492 ORTHO05D006911 4.2e-98 361.3 175 94.9
Gohir.A05G264075 Gossypium hirsutum HOM05D005492 ORTHO05D006911 7.1e-98 360.5 175 94.3
Gohir.D05G266500 Gossypium hirsutum HOM05D005492 ORTHO05D006911 7.1e-98 360.5 175 94.3
Gorai.009G278400 Gossypium raimondii HOM05D005492 ORTHO05D006911 7.1e-98 360.5 175 94.3
vmacro04619 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 7.1e-98 360.5 174 92.5
Eucgr.F00462 Eucalyptus grandis HOM05D005492 ORTHO05D006911 1.2e-97 359.8 175 94.3
PGR083G0175 Punica granatum HOM05D005492 ORTHO05D006911 1.2e-97 359.8 175 93.7
Duzib041G0066 Durio zibethinus HOM05D005492 ORTHO05D006911 1.6e-97 359.4 175 93.7
Manes.18G054601 Manihot esculenta HOM05D005492 ORTHO05D006911 1.6e-97 359.4 175 93.7
TWI32G1091 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 1.6e-97 359.4 175 92.6
Ciclev10002666m.g Citrus clementina HOM05D005492 ORTHO05D006911 2.1e-97 359.0 175 93.7
Prupe.1G541400 Prunus persica HOM05D005492 ORTHO05D006911 2.1e-97 359.0 175 93.7
arahy.Tifrunner.gnm1.ann1.7IN1UY Arachis hypogaea HOM05D005492 ORTHO05D006911 2.7e-97 358.6 175 93.1
arahy.Tifrunner.gnm1.ann1.EMS59G Arachis hypogaea HOM05D005492 ORTHO05D006911 2.7e-97 358.6 175 93.1
Dinv44895 Davidia involucrata HOM05D005492 ORTHO05D006911 2.7e-97 358.6 175 93.7
CiPaw.15G151700 Carya illinoinensis HOM05D005492 ORTHO05D006911 3.5e-97 358.2 175 92.0
RcHm_v2.0_Chr7g0232851 Rosa chinensis HOM05D005492 ORTHO05D006911 3.5e-97 358.2 175 93.1
VMungo1309G2191 Vigna mungo HOM05D005492 ORTHO05D006911 3.5e-97 358.2 175 93.1
CSS0048416 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 4.6e-97 357.8 175 93.1
FAN04G2818 Fragaria x ananassa HOM05D005492 ORTHO05D006911 6.0e-97 357.5 175 93.1
Gohir.D06G028400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 6.0e-97 357.5 175 93.1
TAR628G0115 Trochodendron aralioides HOM05D005492 ORTHO05D006911 7.9e-97 357.1 175 93.1
Carub.0001s2610 Capsella rubella HOM05D005492 ORTHO05D006911 1.0e-96 356.7 175 92.0
CARHR027130 Cardamine hirsuta HOM05D005492 ORTHO05D006911 1.0e-96 356.7 175 92.0
COL.COLO4_35339 Corchorus olitorius HOM05D005492 ORTHO05D006911 1.0e-96 356.7 175 93.1
CsaV3_3G048290 Cucumis sativus L. HOM05D005492 ORTHO05D006911 1.0e-96 356.7 175 90.9
Hma1.2p1_1548F.1_g290020 Hydrangea macrophylla HOM05D005492 ORTHO05D006911 1.0e-96 356.7 173 93.1
GSVIVG01009242001 Vitis vinifera HOM05D005492 ORTHO05D006911 1.0e-96 356.7 175 93.7
CANSAT35G2015 Cannabis sativa HOM05D005492 ORTHO05D006911 1.3e-96 356.3 175 92.6
Dinv22020 Davidia involucrata HOM05D005492 ORTHO05D006911 1.3e-96 356.3 175 93.1
Gohir.A06G029400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.3e-96 356.3 175 92.6
Oeu002945.1 Olea europaea HOM05D005492 ORTHO05D006911 1.3e-96 356.3 175 93.1
Sabra02G0084500 Salix brachista HOM05D005492 ORTHO05D006911 1.3e-96 356.3 175 92.0
TWI12G1341 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 1.3e-96 356.3 175 91.4
Nitab4.5_0000377g0170 Nicotiana tabacum HOM05D005492 ORTHO05D006911 1.8e-96 355.9 175 93.1
Nitab4.5_0005557g0040 Nicotiana tabacum HOM05D005492 ORTHO05D006911 1.8e-96 355.9 175 93.1
THA.LOC104800327 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 1.8e-96 355.9 175 92.6
Actinidia10257 Actinidia chinensis HOM05D005492 ORTHO05D006911 2.3e-96 355.5 175 93.1
Actinidia19266 Actinidia chinensis HOM05D005492 ORTHO05D006911 2.3e-96 355.5 175 92.6
Cpa.g.sc160.3 Carica papaya HOM05D005492 ORTHO05D006911 2.3e-96 355.5 175 91.4
Glyma.06G091400 Glycine max HOM05D005492 ORTHO05D006911 2.3e-96 355.5 176 92.6
MBI16_g26726_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 2.3e-96 355.5 175 92.6
Oeu026363.1 Olea europaea HOM05D005492 ORTHO05D006911 2.3e-96 355.5 175 93.1
Gorai.010G031300 Gossypium raimondii HOM05D005492 ORTHO05D006911 3.0e-96 355.1 175 92.6
Lj1g0026792 Lotus japonicus HOM05D005492 ORTHO05D006911 3.0e-96 355.1 175 92.0
Potri.002G107600 Populus trichocarpa HOM05D005492 ORTHO05D006911 3.0e-96 355.1 175 91.4
Solyc04g076890.4 Solanum lycopersicum HOM05D005492 ORTHO05D006911 3.0e-96 355.1 175 92.6
Sopen04g030660 Solanum pennellii HOM05D005492 ORTHO05D006911 3.0e-96 355.1 175 92.6
PGSC0003DMG400006380 Solanum tuberosum HOM05D005492 ORTHO05D006911 3.0e-96 355.1 175 92.6
C07p17680 Brassica napus HOM05D005492 ORTHO05D006911 3.9e-96 354.8 175 92.6
FAN08G0693 Fragaria x ananassa HOM05D005492 ORTHO05D006911 3.9e-96 354.8 175 92.0
FAN18G0360 Fragaria x ananassa HOM05D005492 ORTHO05D006911 3.9e-96 354.8 175 92.0
SGA_v2.0_scaffold28G11869 Striga asiatica HOM05D005492 ORTHO05D006911 3.9e-96 354.8 174 92.5
Cfa020694 Carpinus fangiana HOM05D005492 ORTHO05D006911 5.1e-96 354.4 175 92.0
Haze_18999 Corylus avellana HOM05D005492 ORTHO05D006911 5.1e-96 354.4 175 92.0
BcaC06g35300 Brassica carinata HOM05D005492 ORTHO05D006911 6.7e-96 354.0 175 92.0
BolC3t19680H Brassica oleracea HOM05D005492 ORTHO05D006911 6.7e-96 354.0 175 92.0
Migut.N02829 Erythranthe guttata HOM05D005492 ORTHO05D006911 6.7e-96 354.0 174 93.1
Migut.O00437 Erythranthe guttata HOM05D005492 ORTHO05D006911 6.7e-96 354.0 174 93.1
A07p11710 Brassica napus HOM05D005492 ORTHO05D006911 8.7e-96 353.6 175 92.0
A08p26210 Brassica napus HOM05D005492 ORTHO05D006911 8.7e-96 353.6 175 92.0
BolC7t42275H Brassica oleracea HOM05D005492 ORTHO05D006911 8.7e-96 353.6 175 92.0
BraA07t28956Z Brassica rapa HOM05D005492 ORTHO05D006911 8.7e-96 353.6 175 92.0
BraA08t34572Z Brassica rapa HOM05D005492 ORTHO05D006911 8.7e-96 353.6 175 92.0
AL1G40960 Arabidopsis lyrata HOM05D005492 ORTHO05D006911 1.1e-95 353.2 175 90.9
AT1G27530 Arabidopsis thaliana HOM05D005492 ORTHO05D006911 1.1e-95 353.2 175 90.9
BcaC01g06944 Brassica carinata HOM05D005492 ORTHO05D006911 1.1e-95 353.2 175 91.4
QL12p040192 Quercus lobata HOM05D005492 ORTHO05D006911 1.1e-95 353.2 174 90.8
Rhsim07G0214900 Rhododendron simsii HOM05D005492 ORTHO05D006911 1.1e-95 353.2 175 92.6
C03p74220 Brassica napus HOM05D005492 ORTHO05D006911 1.5e-95 352.8 175 91.4
Thhalv10008910m.g Eutrema salsugineum HOM05D005492 ORTHO05D006911 1.5e-95 352.8 175 91.4
Glyma.04G089600 Glycine max HOM05D005492 ORTHO05D006911 1.5e-95 352.8 176 92.0
Psat5g017920 Pisum sativum HOM05D005492 ORTHO05D006911 1.5e-95 352.8 175 91.4
Sc02g0008380 Simmondsia chinensis HOM05D005492 ORTHO05D006911 1.5e-95 352.8 175 92.0
CAN.G723.31 Capsicum annuum HOM05D005492 ORTHO05D006911 1.9e-95 352.4 175 90.9
Cc10_g08150 Coffea canephora HOM05D005492 ORTHO05D006911 1.9e-95 352.4 173 93.6
PSO210G2227 Papaver somniferum HOM05D005492 ORTHO05D006911 1.9e-95 352.4 175 92.0
PSO761G0095 Papaver somniferum HOM05D005492 ORTHO05D006911 1.9e-95 352.4 175 92.0
BcaC01g01601 Brassica carinata HOM05D005492 ORTHO05D006911 2.5e-95 352.1 175 91.4
Sp1g23790 Schrenkiella parvula HOM05D005492 ORTHO05D006911 2.5e-95 352.1 175 90.9
Medtr3g111110 Medicago truncatula HOM05D005492 ORTHO05D006911 3.3e-95 351.7 175 90.9
BcaC05g26754 Brassica carinata HOM05D005492 ORTHO05D006911 4.3e-95 351.3 175 91.4
Lalb_Chr08g0242711 Lupinus albus HOM05D005492 ORTHO05D006911 4.3e-95 351.3 175 90.9
Sed0023469 Sechium edule HOM05D005492 ORTHO05D006911 4.3e-95 351.3 175 90.3
HanXRQChr01g0001771 Helianthus annuus HOM05D005492 ORTHO05D006911 5.7e-95 350.9 175 92.0
unitig_8.g4867 Utricularia gibba HOM05D002193 ORTHO05D002631 5.7e-95 350.9 169 93.5
Aqoxy5G01947 Aquilegia oxysepala HOM05D005492 ORTHO05D006911 7.4e-95 350.5 175 91.4
Lsat_1_v5_gn_9_81101 Lactuca sativa HOM05D005492 ORTHO05D006911 9.6e-95 350.1 174 91.4
Lj4A81T75 Lonicera japonica HOM05D005492 ORTHO05D006911 1.3e-94 349.7 173 92.5
BcaB03g13980 Brassica carinata HOM05D005492 ORTHO05D006911 1.6e-94 349.4 175 90.9
Ca_15548_v3 Cicer arietinum L. HOM05D005492 ORTHO05D006911 1.6e-94 349.4 175 89.7
Duzib116G0911 Durio zibethinus HOM05D005492 ORTHO05D006911 1.6e-94 349.4 177 91.0
TPR.G12370 Trifolium pratense HOM05D005492 ORTHO05D006911 6.2e-94 347.4 175 89.7
Ah.00g000130 Amaranthus hybridus HOM05D005492 ORTHO05D006911 8.2e-94 347.1 175 89.7
AUR62035696 Chenopodium quinoa HOM05D005492 ORTHO05D006911 1.1e-93 346.7 175 91.4
AUR62035408 Chenopodium quinoa HOM05D005492 ORTHO05D006911 1.4e-93 346.3 172 91.3
CDE04G0412 Ceratophyllum demersum HOM05D005492 ORTHO05D006911 1.8e-93 345.9 175 89.1
MSTRG.22188 Avicennia marina HOM05D005492 ORTHO05D006911 6.9e-93 344.0 173 92.5
Aa31LG7G10120 Aethionema arabicum HOM05D005492 ORTHO05D006911 1.2e-92 343.2 174 89.7
ECA232G4293 Erigeron canadensis HOM05D005492 ORTHO05D006911 1.5e-92 342.8 175 89.1
TAR381G0934 Trochodendron aralioides HOM05D005492 ORTHO05D006911 3.4e-92 341.7 175 91.4
Atru.BG.248.p Acer truncatum HOM05D005492 ORTHO05D006911 7.6e-92 340.5 174 89.1
HPP92_010753 Vanilla planifolia HOM05D005492 ORTHO05D006911 7.1e-90 334.0 175 87.4
SEGI_29138 Sequoiadendron giganteum HOM05D005492 ORTHO05D006911 1.0e-88 330.1 175 84.0
Hund05232 Selenicereus undatus HOM05D005492 ORTHO05D006911 1.5e-87 326.2 244 67.2
ATR0767G107 Amborella trichopoda HOM05D005492 ORTHO05D006911 7.4e-87 323.9 173 85.0
Os10g0205200 Oryza sativa ssp. japonica HOM05D005492 ORTHO05D006911 5.3e-85 317.8 174 81.6
Zm00001eb010950 Zea mays HOM05D005492 ORTHO05D006911 1.2e-84 316.6 174 80.5
Mapoly0013s0107 Marchantia polymorpha HOM05D005492 ORTHO05D006911 1.9e-82 309.3 167 81.4
ClCG11G014860 Citrullus lanatus HOM05D005492 ORTHO05D006911 2.7e-81 305.4 150 90.0
Peaxi162Scf00626g00718 Petunia axillaris HOM05D005492 ORTHO05D006911 3.3e-79 298.5 181 80.1
CBR_g37394 Chara braunii HOM05D005492 ORTHO05D006911 3.7e-78 295.0 173 76.3
Pp3c16_2350 Physcomitrium patens HOM05D005492 ORTHO05D006911 1.8e-77 292.7 175 73.7
PRCOL_00001807 Prasinoderma coloniale HOM05D005492 ORTHO05D006911 7.9e-73 277.3 165 70.9
DCAR_009548 Daucus carota HOM05D005492 ORTHO05D006911 1.5e-71 273.1 132 93.2
Phvul.009G146200 Phaseolus vulgaris HOM05D005492 ORTHO05D006911 4.4e-71 271.6 131 92.4
TAR381G1662 Trochodendron aralioides HOM05D005492 ORTHO05D006911 2.2e-70 269.2 131 92.4
Cfa015905 Carpinus fangiana HOM05D005492 ORTHO05D000088 4.8e-70 268.1 167 77.2
Cre02.g142350 Chlamydomonas reinhardtii HOM05D005492 ORTHO05D006911 6.5e-67 257.7 164 68.9
Atru.chr13.934 Acer truncatum HOM05D005492 ORTHO05D006911 3.7e-62 241.9 125 87.2
MELO3C003490.2 Cucumis melo HOM05D005492 ORTHO05D006911 6.5e-59 231.1 124 83.1
Duzib093G0511 Durio zibethinus HOM05D005492 ORTHO05D006911 4.7e-57 224.9 119 86.6
FvH4_5g33720 Fragaria vesca HOM05D005492 ORTHO05D006911 1.0e-56 223.8 112 89.3
THA.LOC104807850 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 5.7e-55 218.0 125 78.4
MBI16_g14677_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 3.7e-54 215.3 114 88.6
Haze_27628 Corylus avellana HOM05D005492 ORTHO05D006911 1.4e-53 213.4 171 55.6
AagrBONN_evm.TU.Sc2ySwM_369.477 Anthoceros agrestis HOM05D005492 ORTHO05D006911 6.5e-51 204.5 112 79.5
Prupe.7G085600 Prunus persica HOM05D005492 ORTHO05D006911 6.1e-49 198.0 104 86.5
Nn2g14030 Nelumbo nucifera HOM05D005492 ORTHO05D006911 7.5e-47 191.0 142 67.6
CSS0004398 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 5.9e-44 181.4 95 87.4
MD08G1145300 Malus domestica HOM05D005492 ORTHO05D006911 4.1e-37 158.7 88 81.8
Dinv07042 Davidia involucrata HOM05D005492 ORTHO05D185078 3.9e-35 152.1 181 50.8
MD05G1007500 Malus domestica HOM05D005492 ORTHO05D006911 1.5e-31 140.2 114 64.0
MD16G1251000 Malus domestica HOM05D005492 ORTHO05D245813 4.4e-31 138.7 132 53.8
Nn5g29750 Nelumbo nucifera HOM05D005492 ORTHO05D006911 9.2e-29 131.0 66 89.4
MD00G1203800 Malus domestica HOM05D005492 ORTHO05D247194 8.3e-22 107.8 115 47.0


User provided reference genes

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