Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21363 Vaccinium macrocarpon HOM05D017876 ORTHO05D018237 4.9e-246 854.0 418 100.0
Rhsim02G0093200 Rhododendron simsii HOM05D000328 ORTHO05D000191 6.0e-42 176.0 265 43.8
Rhsim12G0148100 Rhododendron simsii HOM05D017876 ORTHO05D018237 4.0e-38 163.3 120 71.7
Rhsim08G0121200 Rhododendron simsii HOM05D017876 ORTHO05D018237 1.2e-29 135.2 123 63.4
Rhsim01G0032700 Rhododendron simsii HOM05D017876 ORTHO05D018237 7.5e-29 132.5 123 61.8
PSO832G1352 Papaver somniferum HOM05D000045 ORTHO05D000067 2.2e-12 77.8 114 38.6
Rhsim03G0132200 Rhododendron simsii HOM05D000045 ORTHO05D018237 6.4e-12 76.3 118 41.5
PSO384G4836 Papaver somniferum HOM05D000045 ORTHO05D000067 1.1e-11 75.5 114 37.7
PSO478G0574 Papaver somniferum HOM05D000045 ORTHO05D000067 1.1e-11 75.5 114 37.7
QL02p026731 Quercus lobata HOM05D000045 ORTHO05D000067 2.4e-11 74.3 118 37.3
QL93p2012_0049 Quercus lobata HOM05D000045 ORTHO05D000067 2.4e-11 74.3 118 37.3
PSO339G4486 Papaver somniferum HOM05D000045 ORTHO05D002701 1.6e-10 71.6 94 40.4
CiPaw.05G224800 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.1e-10 71.2 112 39.3
CSS0005556 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.7e-10 70.9 110 38.2
Rhsim06G0105500 Rhododendron simsii HOM05D017876 ORTHO05D018237 2.7e-10 70.9 133 37.6
Actinidia33612 Actinidia chinensis HOM05D017876 ORTHO05D018237 4.6e-10 70.1 87 49.4
COL.COLO4_27566 Corchorus olitorius HOM05D000045 ORTHO05D000067 4.6e-10 70.1 163 28.2
CiPaw.11G177400 Carya illinoinensis HOM05D000045 ORTHO05D002701 6.0e-10 69.7 124 35.5
PSO063G4975 Papaver somniferum HOM05D000160 ORTHO05D011801 6.0e-10 69.7 111 36.9
CSS0030058 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.0e-09 68.9 110 36.4
Lj7C67T4 Lonicera japonica HOM05D000045 ORTHO05D000067 1.0e-09 68.9 93 34.4
vmacro16255 Vaccinium macrocarpon HOM05D000045 ORTHO05D002701 1.0e-09 68.9 130 36.9
CiPaw.09G068500 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.3e-09 68.6 91 40.7
Aqoxy3G02402 Aquilegia oxysepala HOM05D000045 ORTHO05D002701 1.7e-09 68.2 108 35.2
PSO384G3943 Papaver somniferum HOM05D000045 ORTHO05D002701 2.3e-09 67.8 110 32.7
Rhsim12G0001300 Rhododendron simsii HOM05D017876 ORTHO05D018237 2.3e-09 67.8 63 57.1
PSO017G0532 Papaver somniferum HOM05D000045 ORTHO05D000067 3.0e-09 67.4 116 32.8
Prupe.2G013600 Prunus persica HOM05D000045 ORTHO05D000067 3.0e-09 67.4 116 33.6
PSO063G2828 Papaver somniferum HOM05D000045 ORTHO05D000067 3.9e-09 67.0 103 35.0
PSO832G2963 Papaver somniferum HOM05D000045 ORTHO05D000067 3.9e-09 67.0 103 35.0
PSO017G2907 Papaver somniferum HOM05D000045 ORTHO05D000067 5.1e-09 66.6 117 35.0
CiPaw.10G080500 Carya illinoinensis HOM05D000045 ORTHO05D000067 6.6e-09 66.2 91 39.6
COL.COLO4_12305 Corchorus olitorius HOM05D000045 ORTHO05D000067 6.6e-09 66.2 97 36.1
CiPaw.05G024400 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.7e-09 65.9 97 42.3
PSO384G1890 Papaver somniferum HOM05D000045 ORTHO05D002701 8.7e-09 65.9 101 31.7
Prupe.4G256500 Prunus persica HOM05D000045 ORTHO05D000067 8.7e-09 65.9 116 32.8
ClCG01G025840 Citrullus lanatus HOM05D000045 ORTHO05D000067 1.5e-08 65.1 90 35.6
HanXRQChr01g0021131 Helianthus annuus HOM05D000045 ORTHO05D000067 1.5e-08 65.1 94 35.1
Sed0012242 Sechium edule HOM05D000045 ORTHO05D000067 1.5e-08 65.1 89 36.0
TPR.G20817 Trifolium pratense HOM05D000045 ORTHO05D000067 1.5e-08 65.1 170 30.0
Ah.08g215820 Amaranthus hybridus HOM05D000045 ORTHO05D000067 1.9e-08 64.7 89 37.1
CiPaw.08G134300 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.9e-08 64.7 153 32.7
COL.COLO4_24837 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.9e-08 64.7 92 37.0
ECA248G3786 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.5e-08 64.3 94 36.2
Lj3g0014076 Lotus japonicus HOM05D000045 ORTHO05D000067 3.3e-08 63.9 90 36.7
Lalb_Chr24g0396991 Lupinus albus HOM05D000045 ORTHO05D000067 3.3e-08 63.9 90 35.6
Rhsim01G0190100 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.3e-08 63.9 95 33.7
CsaV3_6G053050 Cucumis sativus L. HOM05D000045 ORTHO05D000067 4.3e-08 63.5 163 28.2
Lj4C844T5 Lonicera japonica HOM05D000045 ORTHO05D000067 4.3e-08 63.5 94 34.0
Atru.chr2.3305 Acer truncatum HOM05D000045 ORTHO05D002701 5.6e-08 63.2 111 31.5
arahy.Tifrunner.gnm1.ann1.DZ9UTX Arachis hypogaea HOM05D000045 ORTHO05D000067 5.6e-08 63.2 90 35.6
arahy.Tifrunner.gnm1.ann1.FLC5D2 Arachis hypogaea HOM05D000045 ORTHO05D000067 5.6e-08 63.2 90 35.6
MSTRG.10982 Avicennia marina HOM05D000045 ORTHO05D000067 5.6e-08 63.2 95 34.7
Hund18748 Selenicereus undatus HOM05D000045 ORTHO05D000067 5.6e-08 63.2 89 36.0
Dinv19785 Davidia involucrata HOM05D000045 ORTHO05D000067 7.3e-08 62.8 95 33.7
Duzib170G0251 Durio zibethinus HOM05D000045 ORTHO05D000067 7.3e-08 62.8 90 36.7
Migut.I01028 Erythranthe guttata HOM05D000045 ORTHO05D000067 7.3e-08 62.8 95 33.7
Hma1.2p1_0728F.1_g209290 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 7.3e-08 62.8 96 31.2
CSS0021336 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.6e-08 62.4 95 33.7
CSS0029733 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.6e-08 62.4 95 33.7
CiPaw.05G005200 Carya illinoinensis HOM05D000045 ORTHO05D000067 9.6e-08 62.4 106 34.0
CiPaw.13G125900 Carya illinoinensis HOM05D000045 ORTHO05D000067 9.6e-08 62.4 103 33.0
AUR62039220 Chenopodium quinoa HOM05D000045 ORTHO05D000067 9.6e-08 62.4 89 36.0
MELO3C007004.2 Cucumis melo HOM05D000045 ORTHO05D000067 9.6e-08 62.4 88 36.4
Eucgr.B03670 Eucalyptus grandis HOM05D000045 ORTHO05D000067 9.6e-08 62.4 90 34.4
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 9.6e-08 62.4 108 35.2
TWI60G0301 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 9.6e-08 62.4 96 31.2
CiPaw.05G186800 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.3e-07 62.0 103 33.0
Manes.10G022100 Manihot esculenta HOM05D000045 ORTHO05D000067 1.3e-07 62.0 90 32.2
Potri.003G207100 Populus trichocarpa HOM05D000045 ORTHO05D000067 1.3e-07 62.0 88 35.2
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 1.3e-07 62.0 108 34.3
Thecc.09G226700 Theobroma cacao HOM05D000045 ORTHO05D000067 1.3e-07 62.0 92 34.8
Glyma.15G032800 Glycine max HOM05D000045 ORTHO05D000067 1.6e-07 61.6 90 34.4
Atru.chr7.967 Acer truncatum HOM05D000045 ORTHO05D000067 2.1e-07 61.2 130 33.8
Aqoxy2G00230 Aquilegia oxysepala HOM05D000045 ORTHO05D002701 2.1e-07 61.2 108 31.5
Haze_23077 Corylus avellana HOM05D000045 ORTHO05D000067 2.1e-07 61.2 90 33.3
QL01p005666 Quercus lobata HOM05D000045 ORTHO05D000067 2.1e-07 61.2 90 33.3
vmacro00851 Vaccinium macrocarpon HOM05D000045 ORTHO05D000067 2.1e-07 61.2 89 36.0
Duzib168G0648 Durio zibethinus HOM05D000045 ORTHO05D000067 2.8e-07 60.8 89 34.8
Glyma.13G341600 Glycine max HOM05D000045 ORTHO05D000067 2.8e-07 60.8 90 34.4
TPR.G21972 Trifolium pratense HOM05D000045 ORTHO05D000067 2.8e-07 60.8 91 33.0
PSO210G6153 Papaver somniferum HOM05D000045 ORTHO05D000067 3.6e-07 60.5 101 29.7
Phvul.L010943 Phaseolus vulgaris HOM05D000045 ORTHO05D000067 3.6e-07 60.5 90 34.4
TPR.G39329 Trifolium pratense HOM05D000045 ORTHO05D000067 3.6e-07 60.5 167 25.1
Ca_01281_v3 Cicer arietinum L. HOM05D000045 ORTHO05D000067 4.8e-07 60.1 90 35.6
VMungo1080G1376 Vigna mungo HOM05D000045 ORTHO05D000067 4.8e-07 60.1 90 34.4
CiPaw.15G043900 Carya illinoinensis HOM05D000045 ORTHO05D000067 6.2e-07 59.7 105 32.4
Glyma.08G172600 Glycine max HOM05D000045 ORTHO05D000067 6.2e-07 59.7 166 31.3
CSS0038184 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.1e-06 58.9 155 30.3
Sabra03G0152800 Salix brachista HOM05D000045 ORTHO05D000067 1.1e-06 58.9 88 34.1
TPR.G14927 Trifolium pratense HOM05D000045 ORTHO05D000067 1.1e-06 58.9 170 28.8
Rhsim02G0117800 Rhododendron simsii HOM05D000045 ORTHO05D009940 1.4e-06 58.5 61 45.9
SGA_v2.0_scaffold2874G54232 Striga asiatica HOM05D000045 ORTHO05D002701 1.8e-06 58.2 85 34.1
CSS0038307 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-06 57.8 85 37.6
Os03g0777700 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 2.4e-06 57.8 102 34.3
SGA_v2.0_scaffold210G42088 Striga asiatica HOM05D000045 ORTHO05D014193 2.4e-06 57.8 108 30.6
TWI75G1497 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.4e-06 57.8 91 34.1
CiPaw.01G071100 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.1e-06 57.4 85 38.8
CiPaw.03G259700 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.1e-06 57.4 85 38.8
CiPaw.16G049800 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.1e-06 57.4 92 34.8
Gohir.A05G068000 Gossypium hirsutum HOM05D000045 ORTHO05D000067 3.1e-06 57.4 81 35.8
Gohir.D05G071000 Gossypium hirsutum HOM05D000045 ORTHO05D000067 3.1e-06 57.4 81 35.8
Gorai.009G072000 Gossypium raimondii HOM05D000045 ORTHO05D000067 3.1e-06 57.4 81 35.8
QL07p011181 Quercus lobata HOM05D001299 ORTHO05D013156 3.1e-06 57.4 106 33.0
SGA_v2.0_scaffold97G29227 Striga asiatica HOM05D000045 ORTHO05D012494 3.1e-06 57.4 91 35.2
CSS0004264 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.0e-06 57.0 164 24.4
CSS0045300 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.0e-06 57.0 164 24.4
Nitab4.5_0002128g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.0e-06 57.0 107 29.9
Os07g0563600 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 5.3e-06 56.6 165 28.5
CiPaw.14G121500 Carya illinoinensis HOM05D000045 ORTHO05D000067 6.9e-06 56.2 107 31.8


User provided reference genes

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