Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 2.9e-285 984.6 505 100.0
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 5.7e-257 890.6 561 83.6
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 3.1e-194 682.2 532 67.7
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 6.9e-194 681.0 500 73.2
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 2.7e-166 589.3 534 59.7
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 6.7e-165 584.7 529 59.0
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 6.7e-165 584.7 534 61.0
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 4.1e-162 575.5 444 69.6
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 7.7e-161 571.2 544 57.5
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 2.2e-155 553.1 528 55.9
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 3.7e-155 552.4 538 55.2
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 3.2e-151 539.3 529 55.4
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 9.4e-151 537.7 529 55.2
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 4.7e-150 535.4 534 56.2
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 1.8e-149 533.5 526 54.8
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 5.2e-149 531.9 531 54.4
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 2.0e-148 530.0 537 54.6
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 4.4e-148 528.9 552 52.7
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 9.7e-148 527.7 558 54.8
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 6.3e-147 525.0 536 54.5
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 1.1e-146 524.2 536 56.7
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 1.4e-146 523.9 539 56.4
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 2.4e-146 523.1 535 54.4
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 1.6e-145 520.4 513 54.6
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 2.0e-145 520.0 527 51.8
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 1.1e-143 514.2 530 53.4
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 1.5e-143 513.8 536 54.7
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 1.8e-141 506.9 530 55.3
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 6.8e-141 505.0 534 53.4
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 1.2e-140 504.2 531 55.2
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 1.2e-140 504.2 530 55.1
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 1.2e-140 504.2 535 52.7
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 9.1e-138 494.6 534 51.3
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 7.7e-137 491.5 537 52.1
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 2.9e-136 489.6 533 51.0
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 8.5e-136 488.0 535 51.2
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 1.9e-135 486.9 534 51.7
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 7.2e-135 485.0 523 49.3
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 9.5e-135 484.6 537 52.1
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 4.0e-133 479.2 536 51.9
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 8.8e-133 478.0 532 50.8
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 6.3e-131 471.9 534 51.5
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 7.0e-130 468.4 531 51.0
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 1.2e-129 467.6 534 50.6
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 1.2e-129 467.6 527 47.8
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 2.0e-129 466.8 551 49.0
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 2.3e-128 463.4 529 49.9
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 2.9e-128 463.0 526 50.8
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 8.6e-128 461.5 519 51.6
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 1.1e-127 461.1 556 49.3
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 7.3e-127 458.4 533 50.5
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 7.3e-127 458.4 539 49.2
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 1.6e-126 457.2 535 49.3
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 2.1e-126 456.8 537 49.7
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 2.8e-126 456.4 537 49.9
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 6.1e-126 455.3 537 49.0
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 1.0e-125 454.5 520 50.2
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 1.0e-125 454.5 518 49.8
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 3.0e-125 453.0 537 50.5
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 4.0e-125 452.6 518 49.2
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 6.8e-125 451.8 540 48.3
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 5.7e-124 448.7 535 48.0
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 2.2e-123 446.8 519 51.3
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 3.7e-123 446.0 525 48.0
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 1.1e-122 444.5 522 48.9
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 2.4e-122 443.4 552 50.5
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 5.4e-122 442.2 542 47.2
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.5e-121 439.5 546 47.3
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 7.8e-121 438.3 546 47.3
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 7.8e-121 438.3 546 47.1
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 3.0e-120 436.4 533 50.3
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.9e-120 436.0 549 46.6
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 1.1e-119 434.5 530 45.7
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.5e-119 434.1 548 46.4
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 1.5e-119 434.1 549 46.3
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.9e-119 433.7 611 43.4
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 4.7e-118 429.1 530 48.5
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 8.0e-118 428.3 563 45.1
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 1.7e-115 420.6 545 45.0
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 3.7e-115 419.5 536 44.6
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 4.7e-110 402.5 533 45.2
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 8.1e-110 401.7 531 45.2
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.4e-109 401.0 533 44.3
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 3.1e-109 399.8 533 43.5
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 3.1e-109 399.8 503 46.1
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 1.5e-108 397.5 334 62.6
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 2.2e-107 393.7 534 44.2
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 1.1e-106 391.3 526 44.3
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 4.1e-106 389.4 334 60.8
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 7.1e-106 388.7 540 42.4
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 2.7e-105 386.7 332 60.5
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 1.9e-103 380.6 533 42.0
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 6.8e-101 372.1 678 38.8
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 8.9e-101 371.7 533 41.8
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 1.2e-100 371.3 526 42.2
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 1.3e-99 367.9 525 43.0
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 1.3e-99 367.9 538 40.5
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 1.3e-99 367.9 538 40.5
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 1.3e-99 367.9 538 40.7
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 1.7e-99 367.5 534 40.6
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 2.9e-99 366.7 538 40.3
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 1.9e-98 364.0 538 40.7
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 1.6e-97 360.9 512 42.2
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 3.5e-97 359.8 532 40.6
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 3.5e-97 359.8 435 48.3
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 1.0e-96 358.2 533 40.5
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 2.3e-96 357.1 533 40.5
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 6.2e-94 349.0 577 40.7
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 4.4e-92 342.8 478 44.1
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 1.6e-89 334.3 419 48.7
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 8.7e-88 328.6 559 37.7
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 2.8e-86 323.6 542 38.7
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 1.8e-85 320.9 462 42.6
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 4.9e-83 312.8 353 48.2
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 4.2e-82 309.7 567 35.8
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 6.0e-81 305.8 277 59.9
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 1.3e-80 304.7 557 35.0
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 4.0e-77 293.1 535 37.4
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 6.4e-75 285.8 216 65.7
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 1.2e-73 281.6 215 70.7
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 3.5e-73 280.0 534 35.0
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 5.1e-72 276.2 344 48.5
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 6.0e-65 252.7 280 49.6
CSS0016908 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 1.8e-61 241.1 152 75.0
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 1.2e-60 238.4 294 44.9
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 5.9e-60 236.1 291 46.7
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 7.6e-60 235.7 423 37.8
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 4.3e-55 219.9 501 33.3
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 8.5e-51 205.7 441 34.0
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 6.1e-49 199.5 365 40.0
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 3.3e-39 167.2 292 36.6
Peaxi162Scf00848g00015 Petunia axillaris HOM05D004671 ORTHO05D005638 2.2e-35 154.5 140 57.1
CDE04G1371 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 2.9e-35 154.1 111 59.5
Glyma.20G157700 Glycine max HOM05D004671 ORTHO05D005638 1.5e-34 151.8 136 54.4
CAN.G527.1 Capsicum annuum HOM05D004671 ORTHO05D005638 2.5e-34 151.0 116 61.2
BolC8t50021H Brassica oleracea HOM05D004671 ORTHO05D005638 3.2e-34 150.6 154 48.7
C08p23970 Brassica napus HOM05D004671 ORTHO05D005638 7.2e-34 149.4 154 49.4
BcaC07g39376 Brassica carinata HOM05D004671 ORTHO05D005638 6.7e-32 142.9 149 48.3
MCO01G383 Micromonas commoda HOM05D004671 ORTHO05D005638 1.4e-29 135.2 510 24.5
Glyma.12G162990 Glycine max HOM05D004671 ORTHO05D005638 9.4e-26 122.5 118 54.2
BcaB01g00761 Brassica carinata HOM05D004671 ORTHO05D005638 8.0e-25 119.4 178 40.4
CBR_g5700 Chara braunii HOM05D004671 ORTHO05D005638 5.2e-24 116.7 144 43.8
Cre16.g673900 Chlamydomonas reinhardtii HOM05D004671 ORTHO05D005638 2.8e-22 110.9 655 22.0
CBR_g5701 Chara braunii HOM05D004671 ORTHO05D005638 2.7e-20 104.4 196 32.7
Zm00001eb440850 Zea mays HOM05D004671 ORTHO05D005638 1.0e-16 92.4 102 44.1
AL5G14400 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 4.0e-16 90.5 252 30.6
Cre11.g476376 Chlamydomonas reinhardtii HOM05D030013 ORTHO05D028799 4.0e-08 63.9 128 28.9
CBR_g26425 Chara braunii HOM05D004671 ORTHO05D005638 4.9e-06 57.0 98 34.7


User provided reference genes

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