Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21312 Vaccinium macrocarpon HOM05D001755 ORTHO05D001665 3.8e-111 404.8 201 100.0
vmacro04680 Vaccinium macrocarpon HOM05D001755 ORTHO05D001665 3.5e-24 115.9 58 96.6
Nn5g29940 Nelumbo nucifera HOM05D001755 ORTHO05D001665 8.7e-23 111.3 54 98.1
Nitab4.5_0011953g0010 Nicotiana tabacum HOM05D001755 ORTHO05D001665 8.7e-23 111.3 71 80.3
TAR381G0451 Trochodendron aralioides HOM05D001755 ORTHO05D001665 8.7e-23 111.3 54 98.1
CSS0016051 Camellia sinensis var. sinensis HOM05D001755 ORTHO05D001665 1.1e-22 110.9 75 81.3
MBI02_g18287_MAGBIO Magnolia biondii HOM05D001755 ORTHO05D001665 1.1e-22 110.9 53 98.1
CiPaw.07G168100 Carya illinoinensis HOM05D001755 ORTHO05D001665 1.5e-22 110.5 54 96.3
CiPaw.08G054200 Carya illinoinensis HOM05D001755 ORTHO05D001665 1.5e-22 110.5 54 96.3
CSS0010978 Camellia sinensis var. sinensis HOM05D001755 ORTHO05D001665 1.9e-22 110.2 53 98.1
CSS0046975 Camellia sinensis var. sinensis HOM05D001755 ORTHO05D001665 1.9e-22 110.2 53 98.1
ClCG00G003730 Citrullus lanatus HOM05D001755 ORTHO05D001665 1.9e-22 110.2 54 96.3
ClCG08G011500 Citrullus lanatus HOM05D001755 ORTHO05D001665 1.9e-22 110.2 54 96.3
Dinv44836 Davidia involucrata HOM05D001755 ORTHO05D001665 2.5e-22 109.8 53 96.2
FAN08G0378 Fragaria x ananassa HOM05D001755 ORTHO05D001665 2.5e-22 109.8 60 86.7
Peaxi162Scf00160g01119 Petunia axillaris HOM05D001755 ORTHO05D001665 3.3e-22 109.4 57 91.2
CAN.G1658.7 Capsicum annuum HOM05D001755 ORTHO05D001665 4.3e-22 109.0 54 96.3
CiPaw.06G156900 Carya illinoinensis HOM05D001755 ORTHO05D001665 4.3e-22 109.0 54 96.3
ClCG10G009540 Citrullus lanatus HOM05D001755 ORTHO05D001665 4.3e-22 109.0 58 87.9
Dinv24160 Davidia involucrata HOM05D001755 ORTHO05D001665 4.3e-22 109.0 53 96.2
MD08G1193000 Malus domestica HOM05D001755 ORTHO05D001665 4.3e-22 109.0 54 96.3
Prupe.1G527700 Prunus persica HOM05D001755 ORTHO05D001665 4.3e-22 109.0 54 96.3
Gohir.D05G267450 Gossypium hirsutum HOM05D001755 ORTHO05D001665 5.6e-22 108.6 54 94.4
Solyc04g076033.1 Solanum lycopersicum HOM05D001755 ORTHO05D001665 5.6e-22 108.6 53 96.2
Solyc12g087895.1 Solanum lycopersicum HOM05D001755 ORTHO05D001665 5.6e-22 108.6 57 91.2
CsaV3_7G007020 Cucumis sativus L. HOM05D001755 ORTHO05D001665 7.3e-22 108.2 59 88.1
Gorai.010G035900 Gossypium raimondii HOM05D001755 ORTHO05D001665 7.3e-22 108.2 53 94.3
Ah.01g024020 Amaranthus hybridus HOM05D001755 ORTHO05D006340 9.6e-22 107.8 63 85.7
CiPaw.05G031100 Carya illinoinensis HOM05D001755 ORTHO05D001665 9.6e-22 107.8 54 94.4
arahy.Tifrunner.gnm1.ann1.IVYM6W Arachis hypogaea HOM05D001755 ORTHO05D001665 1.2e-21 107.5 58 87.9
Manes.18G061200 Manihot esculenta HOM05D001755 ORTHO05D001665 1.2e-21 107.5 54 94.4
Potri.002G103400 Populus trichocarpa HOM05D001755 ORTHO05D001665 1.2e-21 107.5 54 94.4
Potri.005G158000 Populus trichocarpa HOM05D001755 ORTHO05D001665 1.2e-21 107.5 54 94.4
ATR0022G040 Amborella trichopoda HOM05D001755 ORTHO05D001665 1.6e-21 107.1 54 94.4
Glyma.04G093000 Glycine max HOM05D001755 ORTHO05D001665 1.6e-21 107.1 54 92.6
Gohir.A05G221300 Gossypium hirsutum HOM05D001755 ORTHO05D001665 1.6e-21 107.1 53 92.5
Gohir.A05G265200 Gossypium hirsutum HOM05D001755 ORTHO05D001665 1.6e-21 107.1 54 92.6
Gohir.D05G224000 Gossypium hirsutum HOM05D001755 ORTHO05D001665 1.6e-21 107.1 53 92.5
Gorai.009G231400 Gossypium raimondii HOM05D001755 ORTHO05D001665 1.6e-21 107.1 53 92.5
Phvul.008G179600 Phaseolus vulgaris HOM05D001755 ORTHO05D001665 1.6e-21 107.1 54 94.4
Phvul.009G038300 Phaseolus vulgaris HOM05D001755 ORTHO05D001665 1.6e-21 107.1 54 92.6
Sed0017446 Sechium edule HOM05D001755 ORTHO05D001665 1.6e-21 107.1 54 94.4
Nitab4.5_0002025g0030 Nicotiana tabacum HOM05D001755 ORTHO05D001665 2.1e-21 106.7 55 92.7
Nitab4.5_0004381g0040 Nicotiana tabacum HOM05D001755 ORTHO05D001665 2.1e-21 106.7 55 92.7
Oeu049223.1 Olea europaea HOM05D001755 ORTHO05D001665 2.1e-21 106.7 54 92.6
Glyma.02G212300 Glycine max HOM05D001755 ORTHO05D001665 3.6e-21 105.9 54 92.6
Glyma.14G180100 Glycine max HOM05D001755 ORTHO05D001665 3.6e-21 105.9 54 92.6
MD15G1381800 Malus domestica HOM05D001755 ORTHO05D001665 3.6e-21 105.9 54 92.6
Prupe.8G067700 Prunus persica HOM05D001755 ORTHO05D001665 3.6e-21 105.9 54 92.6
SGA_v2.0_scaffold219G42570 Striga asiatica HOM05D001755 ORTHO05D001665 3.6e-21 105.9 56 91.1
Gohir.A03G175950 Gossypium hirsutum HOM05D001755 ORTHO05D001665 4.7e-21 105.5 54 88.9
Gohir.D02G199750 Gossypium hirsutum HOM05D001755 ORTHO05D001665 4.7e-21 105.5 54 88.9
Gorai.005G224400 Gossypium raimondii HOM05D001755 ORTHO05D001665 4.7e-21 105.5 54 88.9
Manes.02G146800 Manihot esculenta HOM05D001755 ORTHO05D001665 4.7e-21 105.5 54 92.6
Hund27005 Selenicereus undatus HOM05D001755 ORTHO05D001665 4.7e-21 105.5 53 92.5
SEGI_04003 Sequoiadendron giganteum HOM05D001755 ORTHO05D001665 6.2e-21 105.1 53 90.6
ClCG09G015900 Citrullus lanatus HOM05D001755 ORTHO05D001665 8.1e-21 104.8 54 90.7
Duzib132G0573 Durio zibethinus HOM05D001755 ORTHO05D001665 8.1e-21 104.8 56 85.7
Oeu022087.1 Olea europaea HOM05D001755 ORTHO05D001665 8.1e-21 104.8 54 90.7
Peaxi162Scf00281g00710 Petunia axillaris HOM05D001755 ORTHO05D001665 8.1e-21 104.8 55 90.9
Actinidia10367 Actinidia chinensis HOM05D001755 ORTHO05D001665 1.1e-20 104.4 51 96.1
Hma1.2p1_0010F.1_g007000 Hydrangea macrophylla HOM05D001755 ORTHO05D001665 1.1e-20 104.4 55 85.5
Potri.007G112900 Populus trichocarpa HOM05D001755 ORTHO05D001665 1.1e-20 104.4 54 90.7
Rhsim05G0102500 Rhododendron simsii HOM05D001755 ORTHO05D001665 1.1e-20 104.4 53 94.3
RcHm_v2.0_Chr7g0237501 Rosa chinensis HOM05D001755 ORTHO05D001665 1.1e-20 104.4 54 90.7
Sed0017055 Sechium edule HOM05D001755 ORTHO05D001665 1.1e-20 104.4 54 90.7
arahy.Tifrunner.gnm1.ann1.KFP2BM Arachis hypogaea HOM05D001755 ORTHO05D001665 1.4e-20 104.0 53 88.7
arahy.Tifrunner.gnm1.ann1.NI9N2T Arachis hypogaea HOM05D001755 ORTHO05D001665 1.4e-20 104.0 53 88.7
Sabra07G0092200 Salix brachista HOM05D001755 ORTHO05D001665 1.4e-20 104.0 53 90.6
Thecc.02G132000 Theobroma cacao HOM05D001755 ORTHO05D001665 1.4e-20 104.0 54 87.0
DCAR_012866 Daucus carota HOM05D001755 ORTHO05D001665 1.8e-20 103.6 53 90.6
TPR.G18441 Trifolium pratense HOM05D001755 ORTHO05D001665 1.8e-20 103.6 59 84.7
Dinv15987 Davidia involucrata HOM05D001755 ORTHO05D001665 2.4e-20 103.2 54 92.6
Glyma.15G056700 Glycine max HOM05D001755 ORTHO05D001665 2.4e-20 103.2 54 90.7
Sc26g0000250 Simmondsia chinensis HOM05D001755 ORTHO05D001665 2.4e-20 103.2 54 88.9
Potri.017G047932 Populus trichocarpa HOM05D001755 ORTHO05D001665 3.1e-20 102.8 54 88.9
Sed0014860 Sechium edule HOM05D001755 ORTHO05D001665 3.1e-20 102.8 54 90.7
EL10Ac1g01104 Beta vulgaris HOM05D001755 ORTHO05D001665 4.0e-20 102.4 53 88.7
EL10Ac9g22086 Beta vulgaris HOM05D001755 ORTHO05D001665 4.0e-20 102.4 55 83.6
Dinv42637 Davidia involucrata HOM05D001755 ORTHO05D001665 4.0e-20 102.4 51 94.1
HanXRQChr05g0163291 Helianthus annuus HOM05D001755 ORTHO05D001665 4.0e-20 102.4 54 88.9
HanXRQChr05g0163551 Helianthus annuus HOM05D001755 ORTHO05D001665 4.0e-20 102.4 54 88.9
Phvul.006G203500 Phaseolus vulgaris HOM05D001755 ORTHO05D001665 4.0e-20 102.4 54 88.9
Manes.10G102000 Manihot esculenta HOM05D001755 ORTHO05D001665 5.3e-20 102.1 54 88.9
Actinidia33109 Actinidia chinensis HOM05D001755 ORTHO05D001665 6.9e-20 101.7 51 96.1
arahy.Tifrunner.gnm1.ann1.KCV3PX Arachis hypogaea HOM05D001755 ORTHO05D001665 6.9e-20 101.7 55 85.5
Manes.07G036900 Manihot esculenta HOM05D001755 ORTHO05D001665 6.9e-20 101.7 54 87.0
Glyma.07G181100 Glycine max HOM05D001755 ORTHO05D001665 9.0e-20 101.3 54 90.7
Migut.L01932 Erythranthe guttata HOM05D001755 ORTHO05D001665 1.2e-19 100.9 54 88.9
Glyma.08G069600 Glycine max HOM05D001755 ORTHO05D001665 1.2e-19 100.9 54 90.7
Phvul.002G211300 Phaseolus vulgaris HOM05D001755 ORTHO05D001665 1.2e-19 100.9 54 90.7
Migut.B00565 Erythranthe guttata HOM05D001755 ORTHO05D001665 1.5e-19 100.5 54 87.0
Glyma.06G094800 Glycine max HOM05D001755 ORTHO05D001665 1.5e-19 100.5 57 86.0
MD04G1047500 Malus domestica HOM05D001755 ORTHO05D001665 2.0e-19 100.1 54 85.2
vmacro19953 Vaccinium macrocarpon HOM05D001755 ORTHO05D001665 2.0e-19 100.1 51 94.1
arahy.Tifrunner.gnm1.ann1.ZL8253 Arachis hypogaea HOM05D001755 ORTHO05D001665 2.6e-19 99.8 53 84.9
SGA_v2.0_scaffold145G36024 Striga asiatica HOM05D001755 ORTHO05D001665 2.6e-19 99.8 53 84.9
SGA_v2.0_scaffold14G07146 Striga asiatica HOM05D001755 ORTHO05D001665 3.4e-19 99.4 53 86.8
LjContig00408g0004832 Lotus japonicus HOM05D001755 ORTHO05D001665 5.8e-19 98.6 54 85.2
Psat2g065840 Pisum sativum HOM05D001755 ORTHO05D001665 5.8e-19 98.6 54 85.2
CAN.G523.28 Capsicum annuum HOM05D001755 ORTHO05D001665 7.6e-19 98.2 54 87.0
Lalb_Chr11g0065111 Lupinus albus HOM05D001755 ORTHO05D001665 9.9e-19 97.8 54 85.2
Lj1g0001104 Lotus japonicus HOM05D001755 ORTHO05D001665 1.3e-18 97.4 54 83.3
Lalb_Chr08g0242371 Lupinus albus HOM05D001755 ORTHO05D001665 1.7e-18 97.1 54 83.3
Sabra05G0120800 Salix brachista HOM05D001755 ORTHO05D001665 1.7e-18 97.1 81 65.4
Lalb_Chr04g0252981 Lupinus albus HOM05D001755 ORTHO05D001665 2.2e-18 96.7 54 81.5
Medtr5g065670 Medicago truncatula HOM05D001755 ORTHO05D001665 2.2e-18 96.7 53 84.9
Ciclev10006528m.g Citrus clementina HOM05D001755 ORTHO05D001665 4.9e-18 95.5 54 81.5
Sed0003373 Sechium edule HOM05D001755 ORTHO05D001665 4.9e-18 95.5 54 83.3
Nitab4.5_0001507g0060 Nicotiana tabacum HOM05D001755 ORTHO05D001665 8.4e-18 94.7 64 76.6
Solyc01g105700.3 Solanum lycopersicum HOM05D001755 ORTHO05D001665 8.4e-18 94.7 54 83.3
Actinidia25389 Actinidia chinensis HOM05D001755 ORTHO05D001665 1.9e-17 93.6 45 97.8
Hund16874 Selenicereus undatus HOM05D001755 ORTHO05D001665 1.9e-17 93.6 53 79.2
Lalb_Chr17g0344421 Lupinus albus HOM05D001755 ORTHO05D001665 2.4e-17 93.2 54 85.2
Lj4g0016585 Lotus japonicus HOM05D001755 ORTHO05D001665 4.2e-17 92.4 54 81.5
CDE10G0928 Ceratophyllum demersum HOM05D001755 ORTHO05D001665 7.1e-17 91.7 53 77.4
Lalb_Chr05g0217661 Lupinus albus HOM05D001755 ORTHO05D001665 1.6e-16 90.5 54 81.5
DCAR_029187 Daucus carota HOM05D001755 ORTHO05D001665 3.5e-16 89.4 54 81.5
BcaC03g18258 Brassica carinata HOM05D001755 ORTHO05D001665 1.7e-15 87.0 54 74.1
BraA02t09253Z Brassica rapa HOM05D001755 ORTHO05D001665 2.3e-15 86.7 54 72.2
MBI06_g42716_MAGBIO Magnolia biondii HOM05D001755 ORTHO05D001665 2.3e-15 86.7 43 95.3
Nitab4.5_0001264g0230 Nicotiana tabacum HOM05D001755 ORTHO05D001665 2.3e-15 86.7 94 53.2
TAR628G0605 Trochodendron aralioides HOM05D001755 ORTHO05D001665 2.3e-15 86.7 49 89.8
Rhsim06G0074100 Rhododendron simsii HOM05D001755 ORTHO05D001665 3.9e-15 85.9 41 100.0
Aa31LG1G17560 Aethionema arabicum HOM05D001755 ORTHO05D001665 8.7e-15 84.7 53 71.7
Thhalv10005432m.g Eutrema salsugineum HOM05D001755 ORTHO05D001665 8.7e-15 84.7 54 72.2
Oeu060039.1 Olea europaea HOM05D001755 ORTHO05D001665 8.7e-15 84.7 52 80.8
arahy.Tifrunner.gnm1.ann1.0E4ZKW Arachis hypogaea HOM05D001755 ORTHO05D001665 1.1e-14 84.3 52 75.0
Carub.0008s0991 Capsella rubella HOM05D001755 ORTHO05D001665 1.9e-14 83.6 54 77.8
FAN13G1260 Fragaria x ananassa HOM05D001755 ORTHO05D001665 2.5e-14 83.2 47 83.0
Carub.0008s2514 Capsella rubella HOM05D001755 ORTHO05D001665 3.3e-14 82.8 54 68.5
Cpa.g.c31184 Carica papaya HOM05D001755 ORTHO05D001665 5.6e-14 82.0 41 92.7
COL.COLO4_35196 Corchorus olitorius HOM05D001755 ORTHO05D001665 5.6e-14 82.0 41 92.7
Nitab4.5_0002650g0060 Nicotiana tabacum HOM05D001755 ORTHO05D001665 5.6e-14 82.0 43 88.4
CARHR278280 Cardamine hirsuta HOM05D001755 ORTHO05D001665 9.6e-14 81.3 54 66.7
Thhalv10015558m.g Eutrema salsugineum HOM05D001755 ORTHO05D001665 9.6e-14 81.3 55 69.1
Carub.0006s0803 Capsella rubella HOM05D001755 ORTHO05D001665 1.3e-13 80.9 55 69.1
CARHR203920 Cardamine hirsuta HOM05D001755 ORTHO05D001665 1.3e-13 80.9 55 69.1
Duzib041G0605 Durio zibethinus HOM05D001755 ORTHO05D001665 1.3e-13 80.9 41 90.2
Aqoxy6G01463 Aquilegia oxysepala HOM05D001755 ORTHO05D001665 1.6e-13 80.5 41 92.7
VMungo1309G0268 Vigna mungo HOM05D001755 ORTHO05D001665 1.6e-13 80.5 41 90.2
Aa31sc34G40 Aethionema arabicum HOM05D001755 ORTHO05D001665 2.1e-13 80.1 46 76.1
AUR62019010 Chenopodium quinoa HOM05D001755 ORTHO05D001665 6.2e-13 78.6 41 87.8
BcaC01g06905 Brassica carinata HOM05D001755 ORTHO05D001665 8.1e-13 78.2 51 68.6
C03p61950 Brassica napus HOM05D001755 ORTHO05D001665 8.1e-13 78.2 51 68.6
BolC3t18454H Brassica oleracea HOM05D001755 ORTHO05D001665 8.1e-13 78.2 51 68.6
MELO3C018591.2 Cucumis melo HOM05D001755 ORTHO05D001665 8.1e-13 78.2 41 87.8
VMungo0540G1031 Vigna mungo HOM05D001755 ORTHO05D001665 1.4e-12 77.4 41 87.8
Duzib052G1081 Durio zibethinus HOM05D001755 ORTHO05D001665 2.4e-12 76.6 43 76.7
arahy.Tifrunner.gnm1.ann1.FV0XI2 Arachis hypogaea HOM05D001755 ORTHO05D001665 5.3e-12 75.5 41 82.9
VMungo0251G2544 Vigna mungo HOM05D001755 ORTHO05D001665 1.2e-11 74.3 41 87.8
BraA10t44831Z Brassica rapa HOM05D001755 ORTHO05D001665 3.4e-11 72.8 54 59.3
AUR62027851 Chenopodium quinoa HOM05D001755 ORTHO05D001665 4.5e-11 72.4 38 89.5
Ciclev10003720m.g Citrus clementina HOM05D001755 ORTHO05D001665 5.8e-11 72.0 41 80.5
BcaB08g37202 Brassica carinata HOM05D001755 ORTHO05D001665 9.9e-11 71.2 53 58.5
BolC9t59551H Brassica oleracea HOM05D001755 ORTHO05D001665 9.9e-11 71.2 53 58.5
FAN18G3889 Fragaria x ananassa HOM05D001755 ORTHO05D001665 9.9e-11 71.2 36 88.9
Sabra17G0032400 Salix brachista HOM05D001755 ORTHO05D001665 4.2e-09 65.9 41 75.6
CDE10G0731 Ceratophyllum demersum HOM05D001755 ORTHO05D001665 4.6e-08 62.4 43 62.8
BcaB07g29738 Brassica carinata HOM05D001755 ORTHO05D001665 1.3e-07 60.8 41 63.4
Aa31LG3G17530 Aethionema arabicum HOM05D001755 ORTHO05D001665 3.9e-07 59.3 41 61.0
unitig_62.g23628 Utricularia gibba HOM05D001755 ORTHO05D001665 1.9e-06 57.0 41 58.5
Nn4g26507 Nelumbo nucifera HOM05D004468 ORTHO05D011136 9.6e-06 54.7 60 50.0


User provided reference genes

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