Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21235 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 3.1e-69 265.0 132 100.0
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 5.3e-45 184.5 114 77.2
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 1.6e-41 172.9 122 71.3
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 1.6e-41 172.9 122 69.7
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 2.7e-41 172.2 113 68.1
CiPaw.05G235800 Carya illinoinensis HOM05D008167 ORTHO05D010296 3.1e-37 158.7 111 63.1
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 9.0e-37 157.1 116 62.1
Cfa015915 Carpinus fangiana HOM05D008167 ORTHO05D010296 3.4e-36 155.2 111 64.0
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 4.5e-36 154.8 115 62.6
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 7.6e-36 154.1 120 59.2
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 1.7e-35 152.9 119 60.5
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 2.2e-35 152.5 117 59.8
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 2.9e-35 152.1 106 66.0
Atru.chr13.1254 Acer truncatum HOM05D008167 ORTHO05D010296 3.8e-35 151.8 117 59.8
Aqoxy6G00583 Aquilegia oxysepala HOM05D008167 ORTHO05D010296 6.5e-35 151.0 112 62.5
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 6.5e-35 151.0 112 58.0
MD15G1365100 Malus domestica HOM05D008167 ORTHO05D010296 1.1e-34 150.2 121 57.9
FvH4_5g37850 Fragaria vesca HOM05D008167 ORTHO05D010296 1.4e-34 149.8 126 56.3
FAN13G0369 Fragaria x ananassa HOM05D008167 ORTHO05D010296 1.4e-34 149.8 120 55.8
FAN18G0166 Fragaria x ananassa HOM05D008167 ORTHO05D010296 1.4e-34 149.8 126 56.3
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 1.4e-34 149.8 117 59.0
FAN04G1438 Fragaria x ananassa HOM05D008167 ORTHO05D010296 1.9e-34 149.4 119 57.1
FAN08G3120 Fragaria x ananassa HOM05D008167 ORTHO05D010296 2.5e-34 149.1 118 56.8
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 3.2e-34 148.7 110 58.2
TWI56G0729 Tripterygium wilfordii HOM05D008167 ORTHO05D010296 1.6e-33 146.4 105 63.8
Gorai.002G219300 Gossypium raimondii HOM05D008167 ORTHO05D010296 3.0e-32 142.1 107 58.9
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 3.0e-32 142.1 114 53.5
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 5.1e-32 141.4 115 56.5
COL.COLO4_16444 Corchorus olitorius HOM05D008167 ORTHO05D010296 5.1e-32 141.4 109 56.9
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 6.7e-32 141.0 100 61.0
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 1.1e-31 140.2 114 56.1
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 9.7e-31 137.1 118 51.7
Psat4g183040 Pisum sativum HOM05D008167 ORTHO05D010296 9.7e-31 137.1 109 58.7
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 2.2e-30 136.0 103 59.2
Lalb_Chr01g0013571 Lupinus albus HOM05D008167 ORTHO05D010296 6.3e-30 134.4 110 56.4
Ca_23370_v3 Cicer arietinum L. HOM05D008167 ORTHO05D010296 1.8e-29 132.9 104 57.7
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 2.4e-29 132.5 104 58.7
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 4.1e-29 131.7 104 61.5
Eucgr.F02444 Eucalyptus grandis HOM05D008167 ORTHO05D010296 5.3e-29 131.3 122 54.1
VMungo0331G0414 Vigna mungo HOM05D008167 ORTHO05D010296 1.2e-28 130.2 109 56.0
DCAR_008714 Daucus carota HOM05D008167 ORTHO05D010296 2.9e-27 125.6 77 71.4
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 2.9e-27 125.6 103 56.3
CANSAT25G1054 Cannabis sativa HOM05D008167 ORTHO05D010296 3.8e-27 125.2 83 66.3
ECA232G3852 Erigeron canadensis HOM05D008167 ORTHO05D010296 1.1e-26 123.6 75 73.3
Gohir.A01G186400 Gossypium hirsutum HOM05D008167 ORTHO05D010296 3.6e-25 118.6 74 66.2
Gohir.D01G176900 Gossypium hirsutum HOM05D008167 ORTHO05D010296 6.1e-25 117.9 74 66.2
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 6.1e-25 117.9 83 62.7
Sabra02G0073900 Salix brachista HOM05D008167 ORTHO05D010296 3.0e-24 115.5 93 59.1
Cpa.g.sc66.82 Carica papaya HOM05D008167 ORTHO05D010296 1.1e-23 113.6 74 68.9
Duzib093G0044 Durio zibethinus HOM05D008167 ORTHO05D010296 3.3e-23 112.1 87 57.5
arahy.Tifrunner.gnm1.ann1.DD9M5F Arachis hypogaea HOM05D008167 ORTHO05D010296 4.4e-23 111.7 166 38.0
Medtr8g020400 Medicago truncatula HOM05D008167 ORTHO05D010296 7.4e-23 110.9 83 61.4
GSVIVG01009002001 Vitis vinifera HOM05D008167 ORTHO05D010296 2.2e-19 99.4 52 80.8
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 1.1e-18 97.1 102 45.1
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 4.2e-18 95.1 98 46.9
Glyma.07G037500 Glycine max HOM05D008167 ORTHO05D010296 4.1e-13 78.6 109 41.3


User provided reference genes

Program Settings