Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21234 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 1.3e-182 642.9 321 100.0
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 3.9e-110 402.1 319 65.8
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 1.2e-98 364.0 290 67.9
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 1.4e-94 350.5 298 61.4
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 3.0e-94 349.4 298 61.4
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 1.0e-86 324.3 312 57.4
Cfa015915 Carpinus fangiana HOM05D008167 ORTHO05D010296 4.4e-85 318.9 322 56.5
CiPaw.05G235800 Carya illinoinensis HOM05D008167 ORTHO05D010296 5.3e-83 312.0 323 53.3
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 6.1e-79 298.5 293 54.9
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 1.0e-78 297.7 290 57.9
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 1.4e-78 297.4 300 54.7
Aqoxy6G00583 Aquilegia oxysepala HOM05D008167 ORTHO05D010296 7.5e-77 291.6 301 54.2
Gohir.D01G176900 Gossypium hirsutum HOM05D008167 ORTHO05D010296 1.7e-76 290.4 300 54.7
Gorai.002G219300 Gossypium raimondii HOM05D008167 ORTHO05D010296 1.1e-75 287.7 300 54.3
Duzib093G0044 Durio zibethinus HOM05D008167 ORTHO05D010296 1.4e-75 287.3 299 53.5
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 3.1e-75 286.2 291 56.0
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 7.0e-75 285.0 297 54.5
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 9.1e-75 284.6 297 52.2
COL.COLO4_16444 Corchorus olitorius HOM05D008167 ORTHO05D010296 1.2e-74 284.3 300 52.0
arahy.Tifrunner.gnm1.ann1.DD9M5F Arachis hypogaea HOM05D008167 ORTHO05D010296 1.3e-73 280.8 290 52.4
Cpa.g.sc66.82 Carica papaya HOM05D008167 ORTHO05D010296 2.2e-73 280.0 316 49.4
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 5.0e-73 278.9 324 50.9
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 8.5e-73 278.1 290 52.1
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 2.5e-72 276.6 306 52.0
Lalb_Chr01g0013571 Lupinus albus HOM05D008167 ORTHO05D010296 3.2e-72 276.2 294 49.0
Gohir.A01G186400 Gossypium hirsutum HOM05D008167 ORTHO05D010296 5.5e-72 275.4 298 53.4
FAN04G1438 Fragaria x ananassa HOM05D008167 ORTHO05D010296 1.6e-71 273.9 297 52.9
CANSAT25G1054 Cannabis sativa HOM05D008167 ORTHO05D010296 2.1e-71 273.5 292 53.1
FvH4_5g37850 Fragaria vesca HOM05D008167 ORTHO05D010296 2.7e-71 273.1 290 52.1
GSVIVG01009002001 Vitis vinifera HOM05D008167 ORTHO05D010296 3.6e-71 272.7 266 57.5
FAN08G3120 Fragaria x ananassa HOM05D008167 ORTHO05D010296 1.0e-70 271.2 296 51.7
Medtr8g020400 Medicago truncatula HOM05D008167 ORTHO05D010296 1.4e-70 270.8 293 50.9
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 3.0e-70 269.6 292 52.4
FAN13G0369 Fragaria x ananassa HOM05D008167 ORTHO05D010296 8.8e-70 268.1 291 52.2
TWI56G0729 Tripterygium wilfordii HOM05D008167 ORTHO05D010296 8.8e-70 268.1 307 50.2
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 2.4e-67 260.0 286 51.4
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 1.2e-66 257.7 319 49.5
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 1.6e-66 257.3 290 51.4
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 2.0e-66 256.9 316 48.7
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 1.7e-65 253.8 280 48.6
FAN18G0166 Fragaria x ananassa HOM05D008167 ORTHO05D010296 2.3e-62 243.4 247 53.0
Atru.chr13.1254 Acer truncatum HOM05D008167 ORTHO05D010296 7.0e-59 231.9 172 65.7
DCAR_008714 Daucus carota HOM05D008167 ORTHO05D010296 7.0e-59 231.9 240 52.9
VMungo0331G0414 Vigna mungo HOM05D008167 ORTHO05D010296 2.7e-58 229.9 287 47.4
ATR0564G341 Amborella trichopoda HOM05D008167 ORTHO05D010296 7.8e-58 228.4 311 43.4
MD15G1365100 Malus domestica HOM05D008167 ORTHO05D010296 6.6e-57 225.3 173 63.0
Sabra02G0073900 Salix brachista HOM05D008167 ORTHO05D010296 1.4e-54 217.6 283 46.3
ECA232G3852 Erigeron canadensis HOM05D008167 ORTHO05D010296 2.3e-54 216.9 165 63.0
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 2.0e-53 213.8 286 43.4
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 2.6e-53 213.4 281 44.1
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 7.0e-51 205.3 280 42.5
Haze_17026 Corylus avellana HOM05D000028 ORTHO05D010296 1.5e-45 187.6 172 59.3
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 9.8e-45 184.9 182 50.0
Haze_00155 Corylus avellana HOM05D008167 ORTHO05D010296 1.3e-44 184.5 112 78.6
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 8.3e-44 181.8 111 79.3
Ca_23370_v3 Cicer arietinum L. HOM05D008167 ORTHO05D010296 1.3e-41 174.5 140 59.3
Glyma.16G006900 Glycine max HOM05D008167 ORTHO05D010296 1.1e-40 171.4 275 42.5
Psat4g183040 Pisum sativum HOM05D008167 ORTHO05D010296 6.2e-39 165.6 141 57.4
SEGI_30626 Sequoiadendron giganteum HOM05D008167 ORTHO05D010296 2.9e-36 156.8 193 42.5
Haze_15967 Corylus avellana HOM05D008167 ORTHO05D010296 1.0e-33 148.3 155 54.2
Eucgr.F02444 Eucalyptus grandis HOM05D008167 ORTHO05D010296 8.6e-33 145.2 161 51.6
Haze_08650 Corylus avellana HOM05D008167 ORTHO05D010296 5.8e-29 132.5 82 74.4
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 2.2e-12 77.4 179 31.3
MD15G1365000 Malus domestica HOM05D008167 ORTHO05D010296 4.9e-12 76.3 86 53.5
Medtr8g020410 Medicago truncatula HOM05D008167 ORTHO05D010296 3.5e-10 70.1 49 57.1


User provided reference genes

Program Settings