Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21230 Vaccinium macrocarpon HOM05D000562 ORTHO05D000388 4.0e-34 147.5 74 100.0
Rhsim06G0085200 Rhododendron simsii HOM05D000562 ORTHO05D000388 4.9e-16 87.4 51 86.3
Actinidia10301 Actinidia chinensis HOM05D000562 ORTHO05D000388 4.8e-11 70.9 58 67.2
GSVIVG01008993001 Vitis vinifera HOM05D000562 ORTHO05D000388 1.4e-10 69.3 64 68.8
Gohir.A06G037900 Gossypium hirsutum HOM05D000562 ORTHO05D000388 1.2e-09 66.2 57 68.4
Gorai.010G044000 Gossypium raimondii HOM05D000562 ORTHO05D000388 1.2e-09 66.2 57 68.4
Cpa.g.sc66.88 Carica papaya HOM05D000562 ORTHO05D000388 1.5e-09 65.9 55 63.6
Actinidia30751 Actinidia chinensis HOM05D000562 ORTHO05D000388 2.6e-09 65.1 58 65.5
Gohir.D06G039600 Gossypium hirsutum HOM05D000562 ORTHO05D000388 3.4e-09 64.7 57 66.7
Oeu061478.1 Olea europaea HOM05D000562 ORTHO05D000388 3.4e-09 64.7 51 70.6
Dinv44747 Davidia involucrata HOM05D000562 ORTHO05D000388 4.5e-09 64.3 57 64.9
Eucgr.F00485 Eucalyptus grandis HOM05D000562 ORTHO05D000388 4.5e-09 64.3 60 65.0
Eucgr.L03204 Eucalyptus grandis HOM05D000562 ORTHO05D000388 4.5e-09 64.3 60 65.0
COL.COLO4_16457 Corchorus olitorius HOM05D000562 ORTHO05D000388 5.8e-09 63.9 57 66.7
Gohir.A05G229100 Gossypium hirsutum HOM05D000562 ORTHO05D000388 5.8e-09 63.9 56 64.3
Manes.18G070000 Manihot esculenta HOM05D000562 ORTHO05D000388 5.8e-09 63.9 56 66.1
TAR376G0983 Trochodendron aralioides HOM05D000562 ORTHO05D000388 5.8e-09 63.9 56 64.3
TAR628G0177 Trochodendron aralioides HOM05D000562 ORTHO05D000388 5.8e-09 63.9 56 62.5
TAR628G1146 Trochodendron aralioides HOM05D000562 ORTHO05D000388 5.8e-09 63.9 56 62.5
Cc10_g05840 Coffea canephora HOM05D000562 ORTHO05D000388 7.6e-09 63.5 57 68.4
PSO210G5237 Papaver somniferum HOM05D000562 ORTHO05D000388 7.6e-09 63.5 57 59.6
MSTRG.24961 Avicennia marina HOM05D000562 ORTHO05D000388 1.3e-08 62.8 58 67.2
Dinv13040 Davidia involucrata HOM05D000562 ORTHO05D000388 1.3e-08 62.8 55 65.5
Gohir.D05G231500 Gossypium hirsutum HOM05D000562 ORTHO05D000388 1.3e-08 62.8 56 62.5
Gorai.009G239700 Gossypium raimondii HOM05D000562 ORTHO05D000388 1.3e-08 62.8 56 62.5
Duzib041G0664 Durio zibethinus HOM05D000562 ORTHO05D000388 1.7e-08 62.4 57 63.2
PSO447G0112 Papaver somniferum HOM05D000562 ORTHO05D000388 1.7e-08 62.4 57 57.9
Haze_24969 Corylus avellana HOM05D000562 ORTHO05D000388 2.2e-08 62.0 59 59.3
Hma1.2p1_0467F.1_g158590 Hydrangea macrophylla HOM05D000562 ORTHO05D000388 2.9e-08 61.6 55 67.3
Lj1g0000323 Lotus japonicus HOM05D000562 ORTHO05D000388 3.8e-08 61.2 54 64.8
ATR0564G433 Amborella trichopoda HOM05D000562 ORTHO05D000388 4.9e-08 60.8 56 64.3
Potri.005G168900 Populus trichocarpa HOM05D000562 ORTHO05D000388 4.9e-08 60.8 56 62.5
MSTRG.24475 Avicennia marina HOM05D000562 ORTHO05D000388 8.4e-08 60.1 42 69.0
Migut.C00223 Erythranthe guttata HOM05D000562 ORTHO05D000388 8.4e-08 60.1 55 67.3
MBI02_g30889_MAGBIO Magnolia biondii HOM05D000562 ORTHO05D000388 8.4e-08 60.1 58 62.1
Manes.02G155100 Manihot esculenta HOM05D000562 ORTHO05D000388 1.1e-07 59.7 58 63.8
Sabra05G0126700 Salix brachista HOM05D000562 ORTHO05D000388 1.1e-07 59.7 56 60.7
Cfa015922 Carpinus fangiana HOM05D000562 ORTHO05D000388 1.4e-07 59.3 58 58.6
CiPaw.06G022000 Carya illinoinensis HOM05D000562 ORTHO05D000388 1.4e-07 59.3 57 63.2
SalBow6G0158 Salvia bowleyana HOM05D000562 ORTHO05D000388 1.4e-07 59.3 52 69.2
SalBow6G4112 Salvia bowleyana HOM05D000562 ORTHO05D000388 1.4e-07 59.3 52 69.2
TAR381G0155 Trochodendron aralioides HOM05D000562 ORTHO05D000388 1.9e-07 58.9 52 63.5
MD00G1073400 Malus domestica HOM05D000562 ORTHO05D000388 2.5e-07 58.5 60 56.7
Medtr3g073960 Medicago truncatula HOM05D000562 ORTHO05D000388 3.2e-07 58.2 40 70.0
FAN08G3556 Fragaria x ananassa HOM05D000562 ORTHO05D000388 4.2e-07 57.8 55 61.8
Actinidia33152 Actinidia chinensis HOM05D000562 ORTHO05D000388 5.5e-07 57.4 57 57.9
CSS0022810 Camellia sinensis var. sinensis HOM05D000562 ORTHO05D000388 7.1e-07 57.0 60 63.3
CSS0040950 Camellia sinensis var. sinensis HOM05D000562 ORTHO05D000388 7.1e-07 57.0 51 64.7
Haze_00573 Corylus avellana HOM05D000562 ORTHO05D000388 7.1e-07 57.0 58 56.9
Duzib116G0810 Durio zibethinus HOM05D000562 ORTHO05D000388 7.1e-07 57.0 57 59.6
MSTRG.22136 Avicennia marina HOM05D000562 ORTHO05D000388 9.3e-07 56.6 45 62.2
ClCG03G009030 Citrullus lanatus HOM05D000562 ORTHO05D000388 1.2e-06 56.2 61 55.7
FAN13G3076 Fragaria x ananassa HOM05D000562 ORTHO05D000388 1.2e-06 56.2 55 60.0
CiPaw.05G233100 Carya illinoinensis HOM05D000562 ORTHO05D000388 1.6e-06 55.8 59 57.6
CsaV3_5G023590 Cucumis sativus L. HOM05D000562 ORTHO05D000388 1.6e-06 55.8 61 55.7
Duzib093G1495 Durio zibethinus HOM05D000562 ORTHO05D000388 1.6e-06 55.8 60 55.0
TWI12G0031 Tripterygium wilfordii HOM05D000562 ORTHO05D000388 1.6e-06 55.8 54 61.1
CDE10G0317 Ceratophyllum demersum HOM05D000562 ORTHO05D000388 2.1e-06 55.5 64 48.4
FAN18G1126 Fragaria x ananassa HOM05D000562 ORTHO05D000388 2.1e-06 55.5 55 60.0
RcHm_v2.0_Chr7g0239911 Rosa chinensis HOM05D000562 ORTHO05D000388 2.1e-06 55.5 55 60.0
Lsat_1_v5_gn_9_44300 Lactuca sativa HOM05D000562 ORTHO05D000388 2.7e-06 55.1 50 58.0
Cfa002694 Carpinus fangiana HOM05D000562 ORTHO05D000388 3.5e-06 54.7 45 64.4
PGR042G3894 Punica granatum HOM05D000562 ORTHO05D000388 3.5e-06 54.7 62 56.5
PGSC0003DMG400009471 Solanum tuberosum HOM05D000562 ORTHO05D000388 3.5e-06 54.7 62 53.2
Atru.chr13.1261 Acer truncatum HOM05D000562 ORTHO05D000388 4.6e-06 54.3 54 61.1
Aqoxy6G00574 Aquilegia oxysepala HOM05D000562 ORTHO05D000388 4.6e-06 54.3 56 58.9
FAN19G0737 Fragaria x ananassa HOM05D000562 ORTHO05D000388 4.6e-06 54.3 69 50.7
PGR044G1822 Punica granatum HOM05D000562 ORTHO05D000388 4.6e-06 54.3 55 58.2
CDE10G0615 Ceratophyllum demersum HOM05D000562 ORTHO05D000388 6.0e-06 53.9 64 46.9
MELO3C010420.2 Cucumis melo HOM05D000562 ORTHO05D000388 6.0e-06 53.9 62 51.6
MELO3C022791.2 Cucumis melo HOM05D000562 ORTHO05D000388 6.0e-06 53.9 61 54.1
QL12p036000 Quercus lobata HOM05D000562 ORTHO05D000388 6.0e-06 53.9 58 55.2
THA.LOC104800162 Tarenaya hassleriana HOM05D000562 ORTHO05D000388 6.0e-06 53.9 58 51.7
THA.LOC104804734 Tarenaya hassleriana HOM05D000562 ORTHO05D000388 6.0e-06 53.9 57 57.9
ECA232G1560 Erigeron canadensis HOM05D000562 ORTHO05D000388 7.9e-06 53.5 51 60.8
vmacro04765 Vaccinium macrocarpon HOM05D000562 ORTHO05D000388 7.9e-06 53.5 56 60.7


User provided reference genes

Program Settings