Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21208 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 0.0e+00 1196.0 625 100.0
vmacro04432 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 8.1e-227 790.8 611 74.0
vmacro00568 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 3.0e-205 719.2 669 63.8
vmacro00448 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 2.5e-143 513.5 347 80.4
vmacro22682 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 7.9e-81 305.8 256 70.3
vmacro00756 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 3.0e-64 250.8 621 34.9
vmacro21066 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 3.1e-61 240.7 313 51.1
vmacro08873 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.4e-56 225.3 210 61.4
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 9.8e-47 192.6 635 27.7
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 9.8e-47 192.6 635 27.7
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 2.2e-46 191.4 638 26.8
vmacro23365 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 2.3e-43 181.4 106 85.8
vmacro17715 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 3.9e-43 180.6 106 85.8
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 2.2e-38 164.9 619 27.0
vmacro15977 Vaccinium macrocarpon HOM05D006123 ORTHO05D007578 6.4e-38 163.3 256 38.7
vmacro19426 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 3.2e-37 161.0 107 78.5
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 3.9e-35 154.1 580 25.3
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 6.6e-27 126.7 214 32.2
Sabra05G0039100 Salix brachista HOM05D007376 ORTHO05D001969 2.8e-25 121.3 304 30.3
vmacro16256 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 2.3e-24 118.2 247 36.8
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 1.1e-21 109.4 211 28.4
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.1e-21 109.4 213 31.0
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-20 104.8 257 28.4
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 6.0e-20 103.6 215 27.4
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.0e-19 101.3 172 35.5
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.9e-19 100.9 323 26.6
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.9e-19 100.9 213 29.1
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.1e-19 100.5 216 28.2
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.6e-19 100.1 172 34.9
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.6e-19 100.1 172 34.9
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.6e-19 100.1 172 34.9
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.6e-19 100.1 172 34.9
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.6e-19 100.1 172 34.9
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.6e-19 100.1 172 34.9
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.6e-19 100.1 213 29.1
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 8.6e-19 99.8 226 29.2
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.6e-19 99.8 350 25.1
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.6e-19 99.8 350 25.1
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-18 99.4 225 28.9
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.5e-18 99.0 234 27.8
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-18 99.0 346 24.0
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-18 99.0 245 25.3
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.5e-18 98.2 212 25.0
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.5e-18 98.2 222 27.9
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.3e-18 97.8 212 25.5
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.3e-18 97.4 212 25.0
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 4.3e-18 97.4 211 28.9
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.3e-18 97.4 350 25.1
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.6e-18 97.1 216 27.8
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.6e-18 97.1 172 34.3
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.3e-18 96.7 346 23.7
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 1.2e-17 95.9 216 27.3
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.1e-17 95.1 213 28.6
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.1e-17 95.1 275 24.4
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.7e-17 94.0 279 24.4
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 6.2e-17 93.6 212 26.4
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 6.2e-17 93.6 238 30.7
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.8e-16 92.0 318 25.5
Rhsim06G0054100 Rhododendron simsii HOM05D017774 ORTHO05D013099 2.4e-16 91.7 346 30.1
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.2e-16 90.5 290 24.5
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.2e-15 89.4 155 34.8
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.5e-15 89.0 297 26.3
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-15 88.2 290 24.1
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.4e-15 87.4 290 24.1
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 9.9e-15 86.3 178 28.1
FvH4_6g20108 Fragaria vesca HOM05D023564 ORTHO05D001590 9.9e-15 86.3 205 27.8
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.9e-15 86.3 193 28.0
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.9e-14 84.7 453 22.5
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.9e-14 84.0 214 25.7
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.9e-14 84.0 290 24.8
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 6.4e-14 83.6 213 25.8
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.4e-14 83.2 214 25.7
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.4e-14 83.2 260 25.0
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-13 82.0 170 28.8
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 3.2e-13 81.3 213 25.8
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.2e-13 81.3 289 25.3
MD14G1121200 Malus domestica HOM05D001313 ORTHO05D001590 5.4e-13 80.5 226 24.8
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.3e-13 79.7 300 23.3
MD05G1170800 Malus domestica HOM05D023633 ORTHO05D001590 1.2e-12 79.3 234 24.8
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 1.2e-12 79.3 285 24.9
FAN12G3449 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.6e-12 79.0 283 25.4
FAN02G0597 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.1e-12 78.6 286 26.6
FAN22G1831 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.1e-12 78.6 286 26.6
FvH4_2g09801 Fragaria vesca HOM05D012588 ORTHO05D001590 2.7e-12 78.2 213 25.4
FAN07G1365 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.7e-12 78.2 291 28.2
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.7e-12 78.2 212 26.4
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.7e-12 78.2 212 26.4
FAN11G1661 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.5e-12 77.8 288 27.4
FAN19G0965 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.5e-12 77.8 288 27.4
FAN19G2309 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.0e-11 76.3 286 25.9
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-11 75.9 160 31.9
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-11 75.5 189 27.5
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.3e-11 75.1 173 27.2
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 3.0e-11 74.7 197 25.9
FvH4_1g25221 Fragaria vesca HOM05D011367 ORTHO05D001590 3.9e-11 74.3 324 24.1
FvH4_5g24283 Fragaria vesca HOM05D001313 ORTHO05D001590 5.1e-11 73.9 172 27.9
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 6.6e-11 73.6 212 25.9
FAN09G0479 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.7e-11 73.2 226 26.1
FAN13G0579 Fragaria x ananassa HOM05D001313 ORTHO05D008319 8.7e-11 73.2 226 26.1
FAN20G1515 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.7e-11 73.2 226 26.1
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.7e-11 73.2 310 22.9
FAN05G1624 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-10 72.8 226 26.1
FAN16G0195 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-10 72.8 226 26.1
FAN20G2634 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-10 72.8 226 26.1
FAN21G0188 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-10 72.8 226 26.1
FAN06G0107 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.5e-10 72.4 226 26.1
FAN16G1497 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.5e-10 72.4 226 26.1
FAN18G2179 Fragaria x ananassa HOM05D001313 ORTHO05D013602 1.5e-10 72.4 226 26.1
FAN02G4545 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.9e-10 72.0 226 26.1
FAN05G5162 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.9e-10 72.0 284 23.9
FAN16G3538 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.9e-10 72.0 226 26.1
FAN19G2316 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.9e-10 72.0 226 26.1
FAN25G0192 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.9e-10 72.0 226 26.1
MD10G1053600 Malus domestica HOM05D023633 ORTHO05D001590 1.9e-10 72.0 185 25.4
FAN06G0820 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.3e-10 71.2 226 26.1
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.3e-10 71.2 287 23.3
FAN18G0736 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.3e-10 70.9 225 25.8
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.6e-10 69.7 287 23.3
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.3e-09 69.3 414 22.7
FAN18G1258 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.3e-09 69.3 214 26.2
FAN21G2373 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.3e-09 69.3 226 26.5
FAN23G3035 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.3e-09 69.3 226 25.7
CSS0047785 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.6e-09 68.9 152 26.3
FvH4_2g08390 Fragaria vesca HOM05D001313 ORTHO05D013602 2.1e-09 68.6 226 26.5
FAN05G4752 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.1e-09 68.6 226 26.1
FAN24G1121 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.1e-09 68.6 226 25.7
FvH4_5g27850 Fragaria vesca HOM05D001313 ORTHO05D013602 3.6e-09 67.8 226 26.1
FAN02G0978 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.6e-09 67.8 166 29.5
FAN04G0296 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.6e-09 67.8 286 25.5
MBI01_g19130_MAGBIO Magnolia biondii HOM05D029362 ORTHO05D022891 6.2e-09 67.0 179 27.9
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.2e-09 67.0 287 22.6
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.2e-09 67.0 121 33.1
FAN12G0223 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.1e-09 66.6 226 26.1
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 8.1e-09 66.6 182 26.9
FAN19G0928 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.1e-09 66.6 226 25.7
FAN28G1211 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.1e-09 66.6 356 23.9
FvH4_2g15701 Fragaria vesca HOM05D001313 ORTHO05D008319 1.1e-08 66.2 170 26.5
FAN06G4909 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-08 66.2 166 29.5
FAN18G0271 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-08 66.2 220 25.0
FvH4_6g44210 Fragaria vesca HOM05D001313 ORTHO05D013602 1.4e-08 65.9 226 25.7
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 1.8e-08 65.5 127 34.6
FAN11G0400 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.8e-08 65.5 147 28.6
FvH4_4g09920 Fragaria vesca HOM05D001313 ORTHO05D001590 2.4e-08 65.1 226 25.7
MD05G1071400 Malus domestica HOM05D001313 ORTHO05D001590 2.4e-08 65.1 207 25.6
FAN12G3821 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.1e-08 64.7 299 25.1
FAN19G2848 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.1e-08 64.7 198 25.8
Rhsim02G0108800 Rhododendron simsii HOM05D017361 ORTHO05D001590 3.1e-08 64.7 223 24.2
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.0e-08 64.3 247 23.5
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.0e-08 64.3 170 24.7
FvH4_3g31130 Fragaria vesca HOM05D001313 ORTHO05D001590 5.3e-08 63.9 185 28.6
FvH4_7g08490 Fragaria vesca HOM05D001313 ORTHO05D001590 5.3e-08 63.9 330 24.5
FAN12G0772 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-08 63.5 285 25.3
FAN18G3825 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-08 63.5 165 29.7
FAN24G1109 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.9e-08 63.5 245 25.3
FAN12G2756 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.0e-08 63.2 226 25.7
FvH4_7g07291 Fragaria vesca HOM05D016428 ORTHO05D017916 1.2e-07 62.8 178 24.2
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.2e-07 62.8 238 22.3
FvH4_2g03221 Fragaria vesca HOM05D001313 ORTHO05D001590 1.5e-07 62.4 337 24.9
Haze_21153 Corylus avellana HOM05D007651 ORTHO05D000106 2.0e-07 62.0 257 24.9
FvH4_1g20524 Fragaria vesca HOM05D001313 ORTHO05D001590 3.4e-07 61.2 183 24.6
Rhsim08G0155200 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.4e-07 61.2 97 30.9
FAN18G1148 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.5e-07 60.8 262 23.3
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.5e-07 60.8 97 32.0
FvH4_5g37521 Fragaria vesca HOM05D001313 ORTHO05D001590 5.8e-07 60.5 179 25.7
FvH4_5g37401 Fragaria vesca HOM05D001313 ORTHO05D001590 7.6e-07 60.1 181 25.4
FAN16G2686 Fragaria x ananassa HOM05D001313 ORTHO05D001590 7.6e-07 60.1 502 23.1
FAN24G1273 Fragaria x ananassa HOM05D001313 ORTHO05D001590 7.6e-07 60.1 322 25.2
FAN04G0896 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.9e-07 59.7 283 24.4
FAN06G1441 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.9e-07 59.7 178 28.1
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.3e-06 59.3 206 26.2
Aqoxy3G02580 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 1.7e-06 58.9 258 22.1
FAN09G0894 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.7e-06 58.9 341 23.2
FAN19G0155 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.8e-06 57.8 341 24.0
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 3.8e-06 57.8 147 27.2
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.9e-06 57.4 251 22.7
FvH4_1g29720 Fragaria vesca HOM05D001313 ORTHO05D001590 4.9e-06 57.4 203 25.6
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.4e-06 57.0 251 22.7
Rhsim13G0135500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.4e-06 57.0 99 30.3
RhsimUnG0093700 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.4e-06 57.0 90 31.1
vmacro19840 Vaccinium macrocarpon HOM05D007376 ORTHO05D018824 6.4e-06 57.0 190 26.3
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 8.4e-06 56.6 130 27.7
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 8.4e-06 56.6 388 21.4
RcHm_v2.0_Chr6g0266671 Rosa chinensis HOM05D004096 ORTHO05D000898 8.4e-06 56.6 247 26.7


User provided reference genes

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