Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21166 Vaccinium macrocarpon HOM05D002569 ORTHO05D020107 1.4e-73 279.6 152 100.0
Nn2g15442 Nelumbo nucifera HOM05D002569 ORTHO05D020107 4.1e-09 65.5 49 67.3
Rhsim13G0223300 Rhododendron simsii HOM05D002569 ORTHO05D006728 9.2e-09 64.3 43 74.4
vmacro04196 Vaccinium macrocarpon HOM05D002569 ORTHO05D020107 9.2e-09 64.3 43 74.4
arahy.Tifrunner.gnm1.ann1.24VX5E Arachis hypogaea HOM05D002569 ORTHO05D006728 3.5e-08 62.4 43 69.8
arahy.Tifrunner.gnm1.ann1.89IDD9 Arachis hypogaea HOM05D002569 ORTHO05D006728 3.5e-08 62.4 43 69.8
arahy.Tifrunner.gnm1.ann1.IW7M0D Arachis hypogaea HOM05D002569 ORTHO05D006728 3.5e-08 62.4 43 69.8
arahy.Tifrunner.gnm1.ann1.VAJP8X Arachis hypogaea HOM05D002569 ORTHO05D006728 3.5e-08 62.4 43 69.8
ClCG02G023340 Citrullus lanatus HOM05D002569 ORTHO05D006728 3.5e-08 62.4 43 69.8
Prupe.6G023900 Prunus persica HOM05D002569 ORTHO05D006728 7.8e-08 61.2 43 69.8
GSVIVG01025300001 Vitis vinifera HOM05D002569 ORTHO05D006728 1.3e-07 60.5 43 67.4
TAR369G0083 Trochodendron aralioides HOM05D002569 ORTHO05D006728 3.0e-07 59.3 43 67.4
TAR376G0263 Trochodendron aralioides HOM05D002569 ORTHO05D006728 3.0e-07 59.3 43 67.4
Hma1.2p1_0027F.1_g017160 Hydrangea macrophylla HOM05D002569 ORTHO05D006728 3.9e-07 58.9 43 67.4
Ca_01289_v3 Cicer arietinum L. HOM05D002569 ORTHO05D006728 5.0e-07 58.5 39 71.8
FAN21G0039 Fragaria x ananassa HOM05D002569 ORTHO05D006728 5.0e-07 58.5 51 58.8
Lj3g0027520 Lotus japonicus HOM05D002569 ORTHO05D006728 5.0e-07 58.5 39 71.8
Medtr2g098110 Medicago truncatula HOM05D002569 ORTHO05D006728 5.0e-07 58.5 39 71.8
Ciclev10030987m.g Citrus clementina HOM05D002569 ORTHO05D006728 6.6e-07 58.2 43 67.4
MD11G1029600 Malus domestica HOM05D002569 ORTHO05D006728 6.6e-07 58.2 43 65.1
Mapoly0001s0065 Marchantia polymorpha HOM05D002569 ORTHO05D006728 6.6e-07 58.2 43 62.8
CSS0021823 Camellia sinensis var. sinensis HOM05D002569 ORTHO05D006728 8.6e-07 57.8 43 67.4
CSS0039826 Camellia sinensis var. sinensis HOM05D002569 ORTHO05D006728 8.6e-07 57.8 43 67.4
PGR119G1481 Punica granatum HOM05D002569 ORTHO05D006728 8.6e-07 57.8 43 65.1
Carub.0006s1797 Capsella rubella HOM05D002569 ORTHO05D006728 1.1e-06 57.4 43 65.1
Eucgr.J00787 Eucalyptus grandis HOM05D002569 ORTHO05D006728 1.1e-06 57.4 43 65.1
Lalb_Chr14g0372161 Lupinus albus HOM05D002569 ORTHO05D006728 1.1e-06 57.4 43 67.4
MBI19_g25424_MAGBIO Magnolia biondii HOM05D002569 ORTHO05D006728 1.1e-06 57.4 39 71.8
QL01p005206 Quercus lobata HOM05D002569 ORTHO05D006728 1.1e-06 57.4 43 67.4
Atru.chr3.2604 Acer truncatum HOM05D002569 ORTHO05D006728 1.5e-06 57.0 43 65.1
Actinidia16317 Actinidia chinensis HOM05D002569 ORTHO05D006728 1.5e-06 57.0 43 67.4
Ciclev10014959m.g Citrus clementina HOM05D002569 ORTHO05D006728 1.5e-06 57.0 43 62.8
AL6G31130 Arabidopsis lyrata HOM05D002569 ORTHO05D006728 1.9e-06 56.6 43 65.1
AT5G19620 Arabidopsis thaliana HOM05D002569 ORTHO05D006728 1.9e-06 56.6 43 65.1
FAN11G1818 Fragaria x ananassa HOM05D002569 ORTHO05D006728 1.9e-06 56.6 46 58.7
Cc07_g19440 Coffea canephora HOM05D002569 ORTHO05D006728 2.5e-06 56.2 43 62.8
FvH4_3g43030 Fragaria vesca HOM05D002569 ORTHO05D006728 2.5e-06 56.2 43 65.1
FAN16G0653 Fragaria x ananassa HOM05D002569 ORTHO05D006728 2.5e-06 56.2 43 65.1
FAN17G2435 Fragaria x ananassa HOM05D002569 ORTHO05D006728 2.5e-06 56.2 43 65.1
FAN25G0456 Fragaria x ananassa HOM05D002569 ORTHO05D006728 2.5e-06 56.2 43 65.1
RcHm_v2.0_Chr5g0077091 Rosa chinensis HOM05D002569 ORTHO05D006728 2.5e-06 56.2 43 65.1
Sed0019540 Sechium edule HOM05D002569 ORTHO05D006728 2.5e-06 56.2 43 65.1
Aa31LG1G18950 Aethionema arabicum HOM05D002569 ORTHO05D006728 3.3e-06 55.8 43 62.8
CsaV3_4G024160 Cucumis sativus L. HOM05D002569 ORTHO05D006728 3.3e-06 55.8 43 62.8
Lj1A347T9 Lonicera japonica HOM05D002569 ORTHO05D006728 3.3e-06 55.8 43 62.8
Lalb_Chr22g0352351 Lupinus albus HOM05D002569 ORTHO05D020107 3.3e-06 55.8 43 65.1
TPR.G6861 Trifolium pratense HOM05D002569 ORTHO05D006728 3.3e-06 55.8 39 69.2
Nn7g36161 Nelumbo nucifera HOM05D002569 ORTHO05D006728 4.3e-06 55.5 43 65.1
PSO339G1449 Papaver somniferum HOM05D002569 ORTHO05D006728 4.3e-06 55.5 43 62.8
PSO384G3146 Papaver somniferum HOM05D002569 ORTHO05D006728 4.3e-06 55.5 43 62.8
Zm00001eb236320 Zea mays HOM05D002569 ORTHO05D006728 4.3e-06 55.5 39 66.7
Aqoxy7G03862 Aquilegia oxysepala HOM05D002569 ORTHO05D006728 5.6e-06 55.1 43 62.8
COL.COLO4_24854 Corchorus olitorius HOM05D002569 ORTHO05D006728 5.6e-06 55.1 43 62.8
Duzib150G1640 Durio zibethinus HOM05D002569 ORTHO05D006728 5.6e-06 55.1 43 62.8
Gohir.A05G068400 Gossypium hirsutum HOM05D002569 ORTHO05D006728 5.6e-06 55.1 43 62.8
Gohir.D05G071400 Gossypium hirsutum HOM05D002569 ORTHO05D006728 5.6e-06 55.1 43 62.8
Gorai.009G072400 Gossypium raimondii HOM05D002569 ORTHO05D006728 5.6e-06 55.1 43 62.8
Potri.003G204900 Populus trichocarpa HOM05D002569 ORTHO05D006728 7.3e-06 54.7 43 62.8
ATR0605G270 Amborella trichopoda HOM05D002569 ORTHO05D006728 9.5e-06 54.3 39 69.2
CANSAT54G1339 Cannabis sativa HOM05D002569 ORTHO05D006728 9.5e-06 54.3 43 62.8
CDE05G0083 Ceratophyllum demersum HOM05D002569 ORTHO05D020107 9.5e-06 54.3 39 66.7
Pp3c3_3200 Physcomitrium patens HOM05D002569 ORTHO05D006728 9.5e-06 54.3 39 64.1


User provided reference genes

Program Settings