Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21163 Vaccinium macrocarpon HOM05D005201 ORTHO05D006139 6.2e-57 224.2 136 100.0
Rhsim01G0132000 Rhododendron simsii HOM05D005201 ORTHO05D006139 8.7e-51 203.8 129 96.9
FAN08G2124 Fragaria x ananassa HOM05D005201 ORTHO05D006139 6.7e-43 177.6 132 84.8
Ca_25081_v3 Cicer arietinum L. HOM05D005201 ORTHO05D006139 1.5e-42 176.4 129 84.5
Prupe.5G018400 Prunus persica HOM05D005201 ORTHO05D006139 2.5e-42 175.6 132 84.1
FvH4_5g24200 Fragaria vesca HOM05D005201 ORTHO05D006139 3.3e-42 175.3 132 81.1
FAN13G2355 Fragaria x ananassa HOM05D005201 ORTHO05D006139 3.3e-42 175.3 132 81.1
FAN18G1178 Fragaria x ananassa HOM05D005201 ORTHO05D006139 3.3e-42 175.3 132 81.1
Medtr5g026550 Medicago truncatula HOM05D005201 ORTHO05D006139 4.3e-42 174.9 129 83.7
MELO3C016255.2 Cucumis melo HOM05D005201 ORTHO05D006139 1.3e-41 173.3 132 63.6
FAN04G1315 Fragaria x ananassa HOM05D005201 ORTHO05D006139 3.7e-41 171.8 132 80.3
CiPaw.12G072500 Carya illinoinensis HOM05D005201 ORTHO05D006139 4.8e-41 171.4 129 85.3
Eucgr.D02584 Eucalyptus grandis HOM05D005201 ORTHO05D006139 5.3e-40 167.9 132 81.8
Sabra01G0100200 Salix brachista HOM05D005201 ORTHO05D006139 5.8e-39 164.5 129 63.6
Os02g0102600 Oryza sativa ssp. japonica HOM05D005201 ORTHO05D006139 3.8e-38 161.8 132 78.0
Lj8A408T7 Lonicera japonica HOM05D005201 ORTHO05D006139 1.4e-37 159.8 126 82.5
SGA_v2.0_scaffold269G46298 Striga asiatica HOM05D005201 ORTHO05D006139 2.1e-36 156.0 129 65.1
CDE12G0445 Ceratophyllum demersum HOM05D005201 ORTHO05D006139 2.7e-36 155.6 129 79.8
HanXRQChr07g0205241 Helianthus annuus HOM05D005201 ORTHO05D006139 1.8e-35 152.9 127 78.0
Haze_08003 Corylus avellana HOM05D005201 ORTHO05D006139 2.3e-35 152.5 132 74.2
FAN10G0178 Fragaria x ananassa HOM05D002235 ORTHO05D006139 1.5e-34 149.8 134 60.4
FAN14G2110 Fragaria x ananassa HOM05D005201 ORTHO05D006139 1.5e-34 149.8 134 60.4
DCAR_000700 Daucus carota HOM05D005201 ORTHO05D006139 2.5e-34 149.1 129 77.5
FvH4_6g43270 Fragaria vesca HOM05D005201 ORTHO05D006139 3.3e-34 148.7 134 59.7
SGA_v2.0_scaffold2264G54095 Striga asiatica HOM05D005201 ORTHO05D006139 5.6e-34 147.9 117 81.2
RcHm_v2.0_Chr2g0159541 Rosa chinensis HOM05D005201 ORTHO05D006139 2.8e-33 145.6 129 59.7
FAN05G2652 Fragaria x ananassa HOM05D005201 ORTHO05D006139 8.2e-33 144.1 130 58.5
Zm00001eb229310 Zea mays HOM05D005201 ORTHO05D006139 3.1e-32 142.1 121 77.7
Hma1.2p1_0268F.1_g107720 Hydrangea macrophylla HOM05D005201 ORTHO05D006139 5.8e-31 137.9 129 75.2
Migut.A00504 Erythranthe guttata HOM05D005201 ORTHO05D006139 1.3e-30 136.7 130 72.3
SalBow4G2195 Salvia bowleyana HOM05D005201 ORTHO05D006139 1.7e-30 136.3 129 60.5
CSS0000299 Camellia sinensis var. sinensis HOM05D005201 ORTHO05D006139 2.2e-30 136.0 129 55.8
Potri.003G104400 Populus trichocarpa HOM05D005201 ORTHO05D006139 4.9e-30 134.8 132 71.2
CSS0007100 Camellia sinensis var. sinensis HOM05D005201 ORTHO05D006139 2.5e-29 132.5 129 54.3
MD06G1017600 Malus domestica HOM05D005201 ORTHO05D006139 7.1e-29 131.0 132 51.5
Psat2g143240 Pisum sativum HOM05D005201 ORTHO05D006139 7.1e-29 131.0 129 69.0
MD00G1078600 Malus domestica HOM05D005201 ORTHO05D006139 9.3e-29 130.6 132 54.5
TAR375G0792 Trochodendron aralioides HOM05D005201 ORTHO05D006139 9.3e-29 130.6 131 55.0
CiPaw.11G104600 Carya illinoinensis HOM05D005201 ORTHO05D006139 1.2e-28 130.2 129 72.1
SGA_v2.0_scaffold447G51751 Striga asiatica HOM05D003334 ORTHO05D004076 1.6e-28 129.8 125 68.8
Actinidia03317 Actinidia chinensis HOM05D005201 ORTHO05D006139 2.1e-28 129.4 129 53.5
MSTRG.25759 Avicennia marina HOM05D005201 ORTHO05D006139 2.7e-28 129.0 129 51.2
Thecc.03G324300 Theobroma cacao HOM05D005201 ORTHO05D006139 2.7e-28 129.0 131 67.9
RcHm_v2.0_Chr7g0214011 Rosa chinensis HOM05D005201 ORTHO05D006139 3.5e-28 128.6 132 68.9
Lsat_1_v5_gn_5_60900 Lactuca sativa HOM05D005201 ORTHO05D006139 6.0e-28 127.9 116 75.9
PGR031G3990 Punica granatum HOM05D005201 ORTHO05D006139 6.0e-28 127.9 132 71.2
PGR067G0002 Punica granatum HOM05D005201 ORTHO05D006139 6.0e-28 127.9 132 71.2
AagrBONN_evm.TU.Sc2ySwM_344.4086 Anthoceros agrestis HOM05D005201 ORTHO05D006139 1.0e-27 127.1 110 56.4
MSTRG.11837 Avicennia marina HOM05D005201 ORTHO05D006139 1.0e-27 127.1 129 69.0
Dinv09437 Davidia involucrata HOM05D005201 ORTHO05D006139 1.3e-27 126.7 129 70.5
Gohir.A08G146800 Gossypium hirsutum HOM05D005201 ORTHO05D006139 1.8e-27 126.3 130 70.0
Gohir.D08G167900 Gossypium hirsutum HOM05D005201 ORTHO05D006139 1.8e-27 126.3 130 70.0
Gorai.004G175100 Gossypium raimondii HOM05D005201 ORTHO05D006139 1.8e-27 126.3 130 70.0
Actinidia25720 Actinidia chinensis HOM05D005201 ORTHO05D006139 3.0e-27 125.6 124 51.6
Oeu057144.1 Olea europaea HOM05D005201 ORTHO05D006139 3.0e-27 125.6 132 56.8
DCAR_030956 Daucus carota HOM05D005201 ORTHO05D006139 5.1e-27 124.8 129 69.8
Lalb_Chr16g0380611 Lupinus albus HOM05D005201 ORTHO05D006139 6.7e-27 124.4 132 54.5
TPR.G39676 Trifolium pratense HOM05D005201 ORTHO05D006139 8.7e-27 124.0 129 66.7
ATR0829G041 Amborella trichopoda HOM05D005201 ORTHO05D006139 1.1e-26 123.6 128 56.2
CsaV3_4G006880 Cucumis sativus L. HOM05D005201 ORTHO05D006139 1.1e-26 123.6 129 67.4
PSO339G2945 Papaver somniferum HOM05D005201 ORTHO05D006139 1.1e-26 123.6 129 66.7
Sabra03G0071400 Salix brachista HOM05D005201 ORTHO05D006139 1.1e-26 123.6 132 67.4
Hund14321 Selenicereus undatus HOM05D005201 ORTHO05D006139 1.1e-26 123.6 129 67.4
ClCG07G011320 Citrullus lanatus HOM05D005201 ORTHO05D006139 1.5e-26 123.2 129 67.4
HanXRQChr08g0226681 Helianthus annuus HOM05D005201 ORTHO05D006139 3.3e-26 122.1 128 68.8
QL12p002095 Quercus lobata HOM05D005201 ORTHO05D006139 3.3e-26 122.1 130 66.9
Sc07g0008280 Simmondsia chinensis HOM05D005201 ORTHO05D006139 4.3e-26 121.7 129 67.4
COL.COLO4_16707 Corchorus olitorius HOM05D005201 ORTHO05D006139 5.7e-26 121.3 132 48.5
Atru.chr6.2111 Acer truncatum HOM05D005201 ORTHO05D006139 7.4e-26 120.9 132 49.2
Lj2g0015792 Lotus japonicus HOM05D005201 ORTHO05D006139 1.3e-25 120.2 129 65.9
Ah.12g056090 Amaranthus hybridus HOM05D005201 ORTHO05D006139 1.6e-25 119.8 140 49.3
AUR62007435 Chenopodium quinoa HOM05D005201 ORTHO05D006139 1.6e-25 119.8 125 64.8
VMungo1215G2692 Vigna mungo HOM05D005201 ORTHO05D006139 1.6e-25 119.8 132 66.7
Phvul.002G126500 Phaseolus vulgaris HOM05D005201 ORTHO05D006139 3.7e-25 118.6 129 65.9
Duzib205G0777 Durio zibethinus HOM05D005201 ORTHO05D006139 6.3e-25 117.9 132 50.0
Potri.001G129800 Populus trichocarpa HOM05D005201 ORTHO05D006139 8.2e-25 117.5 132 49.2
ECA240G4218 Erigeron canadensis HOM05D005201 ORTHO05D006139 1.1e-24 117.1 133 66.9
Oeu002017.1 Olea europaea HOM05D005201 ORTHO05D006139 1.1e-24 117.1 132 59.1
arahy.Tifrunner.gnm1.ann1.02E8LK Arachis hypogaea HOM05D005201 ORTHO05D006139 1.4e-24 116.7 132 63.6
arahy.Tifrunner.gnm1.ann1.2T22I7 Arachis hypogaea HOM05D005201 ORTHO05D006139 1.4e-24 116.7 132 63.6
Aqoxy3G02454 Aquilegia oxysepala HOM05D005201 ORTHO05D006139 1.8e-24 116.3 129 47.3
AUR62027303 Chenopodium quinoa HOM05D005201 ORTHO05D006139 2.4e-24 115.9 125 63.2
CANSAT21G0726 Cannabis sativa HOM05D005201 ORTHO05D006139 4.1e-24 115.2 129 47.3
Lalb_Chr09g0325181 Lupinus albus HOM05D005201 ORTHO05D006139 4.1e-24 115.2 132 62.1
TWI32G1103 Tripterygium wilfordii HOM05D005201 ORTHO05D006139 9.0e-24 114.0 129 65.1
Sed0020489 Sechium edule HOM05D005201 ORTHO05D006139 1.2e-23 113.6 130 66.2
EL10Ac5g11893 Beta vulgaris HOM05D005201 ORTHO05D006139 2.0e-23 112.8 129 62.8
Ciclev10002646m.g Citrus clementina HOM05D005201 ORTHO05D006139 2.0e-23 112.8 129 65.1
Glyma.01G150400 Glycine max HOM05D005201 ORTHO05D006139 2.0e-23 112.8 132 50.8
PSO384G4870 Papaver somniferum HOM05D005201 ORTHO05D006139 2.0e-23 112.8 130 64.6
CANSAT11G0816 Cannabis sativa HOM05D005201 ORTHO05D006139 2.6e-23 112.5 136 62.5
AUR62022383 Chenopodium quinoa HOM05D005201 ORTHO05D006139 2.6e-23 112.5 125 62.4
CAN.G947.20 Capsicum annuum HOM05D005201 ORTHO05D006139 3.4e-23 112.1 129 48.8
Cc00_g08490 Coffea canephora HOM05D005201 ORTHO05D006139 3.4e-23 112.1 126 57.9
Glyma.09G215400 Glycine max HOM05D005201 ORTHO05D006139 3.4e-23 112.1 132 61.4
Ah.02g117370 Amaranthus hybridus HOM05D005201 ORTHO05D006139 1.0e-22 110.5 130 63.8
unitig_0.g2827 Utricularia gibba HOM05D005201 ORTHO05D006139 1.0e-22 110.5 129 65.1
Sed0016355 Sechium edule HOM05D005201 ORTHO05D006139 2.9e-22 109.0 131 45.8
TWI60G0094 Tripterygium wilfordii HOM05D005201 ORTHO05D006139 3.8e-22 108.6 129 46.5
GSVIVG01036941001 Vitis vinifera HOM05D005201 ORTHO05D006139 8.5e-22 107.5 134 47.0
Lsat_1_v5_gn_6_15560 Lactuca sativa HOM05D005201 ORTHO05D006139 2.5e-21 105.9 123 47.2
Cpa.g.sc137.21 Carica papaya HOM05D005201 ORTHO05D006139 3.2e-21 105.5 129 58.9
Peaxi162Scf00045g01329 Petunia axillaris HOM05D005201 ORTHO05D006139 5.5e-21 104.8 132 44.7
Nitab4.5_0001327g0010 Nicotiana tabacum HOM05D005201 ORTHO05D006139 7.2e-21 104.4 126 46.8
CAN.G1741.1 Capsicum annuum HOM05D005201 ORTHO05D006139 1.6e-20 103.2 132 44.7
Eucgr.B00905 Eucalyptus grandis HOM05D005201 ORTHO05D006139 6.1e-20 101.3 92 57.6
Manes.04G035300 Manihot esculenta HOM05D005201 ORTHO05D006139 6.1e-20 101.3 129 59.7
PGSC0003DMG400029376 Solanum tuberosum HOM05D005201 ORTHO05D006139 1.4e-19 100.1 119 51.3
Nitab4.5_0008438g0010 Nicotiana tabacum HOM05D005201 ORTHO05D006139 3.0e-19 99.0 132 43.2
FAN02G0543 Fragaria x ananassa HOM05D002235 ORTHO05D006252 3.9e-19 98.6 98 51.0
CDE01G0225 Ceratophyllum demersum HOM05D005201 ORTHO05D006139 6.7e-19 97.8 129 45.0
Sopen12g032120 Solanum pennellii HOM05D005201 ORTHO05D006139 8.8e-19 97.4 121 43.8
Nitab4.5_0009069g0010 Nicotiana tabacum HOM05D005201 ORTHO05D006139 1.1e-18 97.1 132 42.4
Solyc08g005910.3 Solanum lycopersicum HOM05D005201 ORTHO05D006139 1.5e-18 96.7 132 42.4
Sopen08g001880 Solanum pennellii HOM05D005201 ORTHO05D006139 1.5e-18 96.7 132 42.4
PSO063G1500 Papaver somniferum HOM05D005201 ORTHO05D006139 3.3e-18 95.5 121 60.3
PSO782G0015 Papaver somniferum HOM05D005201 ORTHO05D006139 3.3e-18 95.5 121 60.3
Thhalv10005013m.g Eutrema salsugineum HOM05D005201 ORTHO05D006139 5.7e-18 94.7 131 44.3
SEGI_37761 Sequoiadendron giganteum HOM05D005201 ORTHO05D006139 5.7e-18 94.7 129 60.5
PGSC0003DMG400004473 Solanum tuberosum HOM05D005201 ORTHO05D006139 7.4e-18 94.4 132 41.7
Nitab4.5_0001159g0040 Nicotiana tabacum HOM05D005201 ORTHO05D006139 8.2e-17 90.9 126 58.7
BcaC06g33218 Brassica carinata HOM05D005201 ORTHO05D006139 1.4e-16 90.1 132 54.5
A03p46860 Brassica napus HOM05D005201 ORTHO05D006139 1.4e-16 90.1 132 54.5
BolC7t45014H Brassica oleracea HOM05D005201 ORTHO05D006139 1.4e-16 90.1 132 54.5
BraA03t13806Z Brassica rapa HOM05D005201 ORTHO05D006139 1.4e-16 90.1 132 54.5
CARHR274980 Cardamine hirsuta HOM05D005201 ORTHO05D006139 1.4e-16 90.1 130 55.4
BcaC04g23459 Brassica carinata HOM05D005201 ORTHO05D006139 1.8e-16 89.7 130 38.5
BraA09t36375Z Brassica rapa HOM05D001456 ORTHO05D002799 1.8e-16 89.7 130 38.5
Sp2g24460 Schrenkiella parvula HOM05D005201 ORTHO05D006139 1.8e-16 89.7 130 55.4
Thhalv10014823m.g Eutrema salsugineum HOM05D005201 ORTHO05D006139 2.4e-16 89.4 131 55.7
A09p07260 Brassica napus HOM05D005201 ORTHO05D006139 3.1e-16 89.0 122 37.7
C09p08120 Brassica napus HOM05D005201 ORTHO05D006139 3.1e-16 89.0 122 37.7
BolC9t53725H Brassica oleracea HOM05D003751 ORTHO05D006139 3.1e-16 89.0 122 37.7
Aa31LG11G2130 Aethionema arabicum HOM05D005201 ORTHO05D006139 5.3e-16 88.2 130 53.8
C07p44910 Brassica napus HOM05D005201 ORTHO05D006139 5.3e-16 88.2 136 52.2
Mapoly0093s0041 Marchantia polymorpha HOM05D005201 ORTHO05D006139 1.5e-15 86.7 109 61.5
THA.LOC104818333 Tarenaya hassleriana HOM05D005201 ORTHO05D006139 2.0e-15 86.3 131 37.4
AL6G18180 Arabidopsis lyrata HOM05D005201 ORTHO05D006139 5.9e-15 84.7 131 55.0
AL8G37890 Arabidopsis lyrata HOM05D005201 ORTHO05D006139 1.7e-14 83.2 130 36.9
AT5G61230 Arabidopsis thaliana HOM05D005201 ORTHO05D006139 1.7e-14 83.2 116 36.2
THA.LOC104801352 Tarenaya hassleriana HOM05D005201 ORTHO05D006139 2.9e-14 82.4 118 36.4
AT5G07840 Arabidopsis thaliana HOM05D005201 ORTHO05D006139 3.8e-14 82.0 130 48.5
Carub.0008s2190 Capsella rubella HOM05D005201 ORTHO05D006139 5.0e-14 81.6 116 34.5
SMO356G0124 Selaginella moellendorffii HOM05D005201 ORTHO05D006139 7.2e-13 77.8 110 39.1
Lsat_1_v5_gn_8_13820 Lactuca sativa HOM05D005201 ORTHO05D006139 7.9e-12 74.3 45 71.1
Peaxi162Scf00876g00121 Petunia axillaris HOM05D005201 ORTHO05D006139 2.3e-11 72.8 95 43.2
Pp3c6_1190 Physcomitrium patens HOM05D005201 ORTHO05D006139 3.0e-11 72.4 130 32.3
Dinv37463 Davidia involucrata HOM05D005201 ORTHO05D006139 3.4e-07 58.9 57 52.6
Nn3g19216 Nelumbo nucifera HOM05D005201 ORTHO05D006139 5.0e-06 55.1 57 49.1


User provided reference genes

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