Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21155 Vaccinium macrocarpon HOM05D004716 ORTHO05D005646 1.0e-201 706.4 342 100.0
Rhsim06G0090400 Rhododendron simsii HOM05D004716 ORTHO05D005646 3.6e-170 601.7 310 92.6
CSS0049856 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 1.0e-161 573.5 310 88.4
Actinidia17798 Actinidia chinensis HOM05D004716 ORTHO05D005646 1.1e-158 563.5 310 86.8
Dinv25852 Davidia involucrata HOM05D004716 ORTHO05D005646 4.6e-149 531.6 315 81.3
COL.COLO4_37837 Corchorus olitorius HOM05D004716 ORTHO05D005646 5.0e-148 528.1 315 81.3
Haze_17746 Corylus avellana HOM05D004716 ORTHO05D005646 5.0e-148 528.1 315 80.3
Cfa018329 Carpinus fangiana HOM05D004716 ORTHO05D005646 1.1e-147 526.9 315 80.3
Hma1.2p1_0105F.1_g050810 Hydrangea macrophylla HOM05D004716 ORTHO05D005646 1.1e-147 526.9 315 80.6
Potri.002G069100 Populus trichocarpa HOM05D004716 ORTHO05D005646 1.5e-147 526.6 334 77.5
Thecc.08G149900 Theobroma cacao HOM05D004716 ORTHO05D005646 1.9e-147 526.2 315 80.6
Phvul.007G079400 Phaseolus vulgaris HOM05D004716 ORTHO05D005646 3.3e-147 525.4 313 80.5
QL02p024060 Quercus lobata HOM05D004716 ORTHO05D005646 7.3e-147 524.2 314 80.9
Glyma.10G225500 Glycine max HOM05D004716 ORTHO05D005646 9.5e-147 523.9 313 79.9
CiPaw.15G016900 Carya illinoinensis HOM05D004716 ORTHO05D005646 1.6e-146 523.1 315 79.7
Atru.chr13.2155 Acer truncatum HOM05D004716 ORTHO05D005646 2.8e-146 522.3 313 79.9
Dinv41092 Davidia involucrata HOM05D004716 ORTHO05D005646 3.6e-146 521.9 339 76.4
Manes.18G091200 Manihot esculenta HOM05D004716 ORTHO05D005646 8.1e-146 520.8 315 80.0
Glyma.20G166300 Glycine max HOM05D004716 ORTHO05D005646 3.1e-145 518.8 313 79.9
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 5.2e-145 518.1 307 81.1
Duzib093G0980 Durio zibethinus HOM05D004716 ORTHO05D005646 6.8e-145 517.7 316 79.7
Potri.005G191300 Populus trichocarpa HOM05D004716 ORTHO05D005646 6.8e-145 517.7 334 76.6
Nn5g28715 Nelumbo nucifera HOM05D004716 ORTHO05D005646 1.5e-144 516.5 314 79.6
Nn1g06102 Nelumbo nucifera HOM05D004716 ORTHO05D005646 2.6e-144 515.8 314 79.3
Psat6g193200 Pisum sativum HOM05D004716 ORTHO05D005646 2.6e-144 515.8 313 79.2
Sabra05G0146100 Salix brachista HOM05D004716 ORTHO05D005646 4.4e-144 515.0 334 76.3
Lj4C695G10 Lonicera japonica HOM05D004716 ORTHO05D005646 5.8e-144 514.6 315 79.7
RcHm_v2.0_Chr6g0275661 Rosa chinensis HOM05D004716 ORTHO05D005646 5.8e-144 514.6 311 78.1
Psat6g193040 Pisum sativum HOM05D004716 ORTHO05D005646 7.5e-144 514.2 305 81.0
TAR381G1500 Trochodendron aralioides HOM05D004716 ORTHO05D005646 7.5e-144 514.2 315 77.1
Duzib116G0661 Durio zibethinus HOM05D004716 ORTHO05D005646 9.9e-144 513.8 315 79.0
GSVIVG01034512001 Vitis vinifera HOM05D004716 ORTHO05D005646 9.9e-144 513.8 315 78.4
Cpa.g.sc21.190 Carica papaya HOM05D004716 ORTHO05D005646 1.3e-143 513.5 306 81.4
Ca_19935_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 1.7e-143 513.1 313 78.6
CiPaw.16G013500 Carya illinoinensis HOM05D004716 ORTHO05D005646 2.2e-143 512.7 312 78.2
Ca_25988_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 3.7e-143 511.9 313 77.6
MBI09_g32373_MAGBIO Magnolia biondii HOM05D004716 ORTHO05D005646 4.9e-143 511.5 313 79.6
Duzib041G0148 Durio zibethinus HOM05D004716 ORTHO05D005646 1.1e-142 510.4 330 74.8
arahy.Tifrunner.gnm1.ann1.LT68UB Arachis hypogaea HOM05D004716 ORTHO05D005646 1.4e-142 510.0 315 79.4
arahy.Tifrunner.gnm1.ann1.RZZD7S Arachis hypogaea HOM05D004716 ORTHO05D005646 1.4e-142 510.0 315 79.4
TAR625G0458 Trochodendron aralioides HOM05D004716 ORTHO05D005646 1.4e-142 510.0 315 77.1
Gorai.009G253500 Gossypium raimondii HOM05D004716 ORTHO05D005646 1.9e-142 509.6 316 78.2
TWI60G0041 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 1.9e-142 509.6 313 78.3
CANSAT25G0539 Cannabis sativa HOM05D004716 ORTHO05D005646 3.2e-142 508.8 310 79.4
MD05G1023700 Malus domestica HOM05D004716 ORTHO05D005646 3.2e-142 508.8 313 77.3
Prupe.8G028200 Prunus persica HOM05D004716 ORTHO05D005646 5.4e-142 508.1 313 76.7
ClCG09G009620 Citrullus lanatus HOM05D004716 ORTHO05D005646 7.1e-142 507.7 315 77.8
TWI34G0952 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 9.2e-142 507.3 313 77.3
CAN.G268.7 Capsicum annuum HOM05D004716 ORTHO05D005646 1.6e-141 506.5 310 77.7
Oeu011938.1 Olea europaea HOM05D004716 ORTHO05D005646 2.7e-141 505.8 304 80.3
Gohir.A05G242900 Gossypium hirsutum HOM05D004716 ORTHO05D005646 3.5e-141 505.4 316 77.5
MELO3C023718.2 Cucumis melo HOM05D004716 ORTHO05D005646 6.0e-141 504.6 315 77.1
Sopen04g027280 Solanum pennellii HOM05D004716 ORTHO05D005646 7.8e-141 504.2 310 77.1
CsaV3_7G025180 Cucumis sativus L. HOM05D004716 ORTHO05D005646 1.3e-140 503.4 315 76.8
Peaxi162Scf00765g00315 Petunia axillaris HOM05D004716 ORTHO05D005646 2.3e-140 502.7 310 77.4
Solyc04g071320.4 Solanum lycopersicum HOM05D004716 ORTHO05D005646 2.3e-140 502.7 310 76.8
Oeu046025.1 Olea europaea HOM05D004716 ORTHO05D005646 5.1e-140 501.5 310 77.4
Cc10_g14730 Coffea canephora HOM05D004716 ORTHO05D005646 8.6e-140 500.7 315 76.2
PGR044G2101 Punica granatum HOM05D004716 ORTHO05D005646 1.1e-139 500.4 351 71.5
MD10G1024300 Malus domestica HOM05D004716 ORTHO05D005646 1.5e-139 500.0 348 70.7
FvH4_2g13910 Fragaria vesca HOM05D004716 ORTHO05D005646 1.9e-139 499.6 310 76.5
Sed0004003 Sechium edule HOM05D004716 ORTHO05D005646 1.9e-139 499.6 315 76.5
Sed0005850 Sechium edule HOM05D004716 ORTHO05D005646 1.9e-139 499.6 315 76.5
FAN15G2444 Fragaria x ananassa HOM05D004716 ORTHO05D005646 2.5e-139 499.2 310 76.1
Aqoxy5G02106 Aquilegia oxysepala HOM05D004716 ORTHO05D005646 4.3e-139 498.4 330 74.2
Nitab4.5_0008759g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 5.6e-139 498.0 311 77.2
FAN27G2333 Fragaria x ananassa HOM05D004716 ORTHO05D005646 7.3e-139 497.7 310 76.1
Lalb_Chr01g0009631 Lupinus albus HOM05D004716 ORTHO05D005646 7.3e-139 497.7 315 77.1
Sed0016522 Sechium edule HOM05D004716 ORTHO05D005646 9.5e-139 497.3 315 76.5
FAN24G2048 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.6e-138 496.5 310 76.1
FAN20G2258 Fragaria x ananassa HOM05D004716 ORTHO05D005646 8.1e-138 494.2 310 75.8
HanXRQChr10g0279061 Helianthus annuus HOM05D004716 ORTHO05D005646 8.1e-138 494.2 316 77.2
Oeu014493.1 Olea europaea HOM05D004716 ORTHO05D005646 8.1e-138 494.2 315 75.2
DCAR_001131 Daucus carota HOM05D004716 ORTHO05D005646 1.1e-137 493.8 310 76.8
Eucgr.F04241 Eucalyptus grandis HOM05D004716 ORTHO05D005646 1.1e-137 493.8 313 77.6
Lalb_Chr06g0161551 Lupinus albus HOM05D004716 ORTHO05D005646 1.1e-137 493.8 334 72.8
Nitab4.5_0000032g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 1.4e-137 493.4 311 76.8
TPR.G36694 Trifolium pratense HOM05D004716 ORTHO05D005646 1.5e-136 490.0 325 73.2
AUR62013572 Chenopodium quinoa HOM05D004716 ORTHO05D005646 5.8e-136 488.0 314 75.2
PSO238G0051 Papaver somniferum HOM05D004716 ORTHO05D005646 5.8e-136 488.0 315 75.6
AUR62026717 Chenopodium quinoa HOM05D004716 ORTHO05D005646 1.3e-135 486.9 314 74.8
Lj5g0004042 Lotus japonicus HOM05D004716 ORTHO05D005646 1.7e-135 486.5 315 75.9
PSO210G2251 Papaver somniferum HOM05D004716 ORTHO05D005646 6.4e-135 484.6 315 75.2
ECA246G4589 Erigeron canadensis HOM05D004716 ORTHO05D005646 1.4e-134 483.4 313 76.0
MSTRG.22371 Avicennia marina HOM05D004716 ORTHO05D005646 1.9e-134 483.0 315 74.0
Migut.N03224 Erythranthe guttata HOM05D004716 ORTHO05D005646 9.2e-134 480.7 310 73.5
THA.LOC104809692 Tarenaya hassleriana HOM05D004716 ORTHO05D005646 1.2e-133 480.3 312 74.7
EL10Ac1g01533 Beta vulgaris HOM05D004716 ORTHO05D005646 4.6e-133 478.4 314 74.5
Ah.05g167860 Amaranthus hybridus HOM05D004716 ORTHO05D005646 2.3e-132 476.1 313 74.1
Carub.0001s3471 Capsella rubella HOM05D004716 ORTHO05D005646 5.1e-132 474.9 313 73.5
Aa31LG6G9740 Aethionema arabicum HOM05D004716 ORTHO05D005646 8.6e-132 474.2 311 74.0
Thhalv10011324m.g Eutrema salsugineum HOM05D004716 ORTHO05D005646 2.5e-131 472.6 313 72.5
AT1G43690 Arabidopsis thaliana HOM05D004716 ORTHO05D005646 4.3e-131 471.9 313 72.8
Ciclev10000573m.g Citrus clementina HOM05D004716 ORTHO05D005646 7.3e-131 471.1 316 74.1
SGA_v2.0_scaffold25G11175 Striga asiatica HOM05D004716 ORTHO05D005646 7.3e-131 471.1 299 75.9
Lj7A371T50 Lonicera japonica HOM05D004716 ORTHO05D005646 3.6e-130 468.8 345 69.3
Gorai.009G285100 Gossypium raimondii HOM05D004716 ORTHO05D005646 4.7e-130 468.4 316 74.4
AL1G51810 Arabidopsis lyrata HOM05D004716 ORTHO05D005646 8.1e-130 467.6 313 71.9
BcaC08g42816 Brassica carinata HOM05D004716 ORTHO05D005646 2.4e-129 466.1 313 71.6
A10p07790 Brassica napus HOM05D004716 ORTHO05D005646 2.4e-129 466.1 313 71.6
C06p00280 Brassica napus HOM05D004716 ORTHO05D005646 2.4e-129 466.1 313 71.6
Gohir.A05G270100 Gossypium hirsutum HOM05D004716 ORTHO05D005646 3.1e-129 465.7 316 74.1
BraSC36t46025Z Brassica rapa HOM05D004716 ORTHO05D005646 4.0e-129 465.3 313 71.6
Sp1g32700 Schrenkiella parvula HOM05D004716 ORTHO05D005646 9.0e-129 464.2 313 71.6
CDE08G0143 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 3.4e-128 462.2 305 75.1
unitig_62.g23528 Utricularia gibba HOM05D004716 ORTHO05D005646 4.4e-128 461.8 313 71.9
TPR.G30003 Trifolium pratense HOM05D004716 ORTHO05D005646 9.9e-128 460.7 315 73.3
BcaB07g33979 Brassica carinata HOM05D004716 ORTHO05D005646 1.7e-127 459.9 313 71.2
ATR0772G093 Amborella trichopoda HOM05D004716 ORTHO05D005646 3.8e-127 458.8 314 70.4
Sc02g0004170 Simmondsia chinensis HOM05D004716 ORTHO05D005646 2.4e-126 456.1 310 72.6
Medtr1g098940 Medicago truncatula HOM05D004716 ORTHO05D005646 3.2e-126 455.7 315 72.4
Lsat_1_v5_gn_6_99641 Lactuca sativa HOM05D004716 ORTHO05D005646 5.4e-126 454.9 307 73.9
CARHR035580 Cardamine hirsuta HOM05D004716 ORTHO05D005646 1.2e-125 453.8 315 69.5
SHI09390 Sapria himalayana HOM05D004716 ORTHO05D005646 6.0e-125 451.4 313 69.6
Zm00001eb422340 Zea mays HOM05D004716 ORTHO05D005646 1.7e-124 449.9 314 70.4
SalBow7G0781 Salvia bowleyana HOM05D004716 ORTHO05D005646 6.6e-124 448.0 310 68.7
CDE06G2375 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 8.7e-124 447.6 294 74.8
Zm00001eb422260 Zea mays HOM05D004716 ORTHO05D005646 1.5e-123 446.8 311 69.8
Os04g0421800 Oryza sativa ssp. japonica HOM05D004716 ORTHO05D005646 8.1e-122 441.0 303 71.6
Gohir.D05G244400 Gossypium hirsutum HOM05D004716 ORTHO05D005646 3.1e-121 439.1 311 70.4
Gohir.D05G272200 Gossypium hirsutum HOM05D004716 ORTHO05D005646 1.2e-120 437.2 316 71.2
SalBow6G6163 Salvia bowleyana HOM05D004716 ORTHO05D005646 9.6e-115 417.5 258 76.0
SMO331G0079 Selaginella moellendorffii HOM05D004716 ORTHO05D005646 1.5e-112 410.2 309 64.4
Migut.C01013 Erythranthe guttata HOM05D004716 ORTHO05D005646 8.4e-111 404.4 319 65.2
Mapoly0014s0164 Marchantia polymorpha HOM05D004716 ORTHO05D005646 4.0e-105 385.6 346 56.1
Zm00001eb422280 Zea mays HOM05D004716 ORTHO05D005646 3.4e-104 382.5 257 72.0
Zm00001eb422320 Zea mays HOM05D004716 ORTHO05D005646 3.4e-104 382.5 257 72.0
Pp3c6_18530 Physcomitrium patens HOM05D004716 ORTHO05D005646 2.3e-100 369.8 311 57.9
Pp3c5_6660 Physcomitrium patens HOM05D004716 ORTHO05D005646 1.5e-99 367.1 308 58.1
HanXRQChr10g0277841 Helianthus annuus HOM05D004716 ORTHO05D005646 2.2e-98 363.2 263 71.9
AagrBONN_evm.TU.Sc2ySwM_344.4417 Anthoceros agrestis HOM05D004716 ORTHO05D005646 2.5e-94 349.7 327 53.5
SGA_v2.0_scaffold24G10374 Striga asiatica HOM05D004716 ORTHO05D005646 6.1e-93 345.1 302 59.9
HPP92_019355 Vanilla planifolia HOM05D004716 ORTHO05D005646 4.8e-90 335.5 230 69.6
CBR_g11170 Chara braunii HOM05D004716 ORTHO05D005646 1.8e-84 317.0 352 48.0
Actinidia10653 Actinidia chinensis HOM05D004716 ORTHO05D005646 3.4e-51 206.5 115 89.6
PRCOL_00002924 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 5.9e-48 195.7 308 38.0
Actinidia13988 Actinidia chinensis HOM05D004716 ORTHO05D005646 8.3e-34 148.7 87 80.5
CAN.G309.90 Capsicum annuum HOM05D004716 ORTHO05D005646 4.1e-33 146.4 183 49.2
Cre06.g286600 Chlamydomonas reinhardtii HOM05D004716 ORTHO05D005646 2.4e-17 94.0 103 47.6
PRCOL_00004133 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 5.1e-15 86.3 128 41.4


User provided reference genes

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