Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 9.8e-121 436.8 218 100.0
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.2e-97 360.1 218 85.8
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.2e-97 360.1 218 85.8
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.4e-95 353.2 228 83.3
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 2.4e-74 282.7 216 71.3
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 6.9e-74 281.2 216 70.8
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 3.4e-73 278.9 216 68.1
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 2.4e-71 272.7 215 65.6
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 3.2e-71 272.3 226 64.2
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 2.7e-70 269.2 216 65.3
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 1.0e-69 267.3 227 61.7
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 8.7e-69 264.2 216 65.7
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 1.5e-68 263.5 216 63.4
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 1.5e-68 263.5 225 61.3
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 3.3e-68 262.3 218 61.9
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 3.3e-68 262.3 216 65.3
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 9.6e-68 260.8 217 62.2
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 9.6e-68 260.8 225 60.9
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 2.8e-67 259.2 215 66.0
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 4.8e-67 258.5 216 64.8
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 4.8e-67 258.5 213 62.9
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 8.1e-67 257.7 216 64.4
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 8.1e-67 257.7 211 64.5
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 1.1e-66 257.3 215 63.7
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 1.1e-66 257.3 216 62.0
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 1.4e-66 256.9 216 62.5
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 1.4e-66 256.9 211 64.9
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 1.4e-66 256.9 213 63.4
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 3.1e-66 255.8 216 62.0
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 5.3e-66 255.0 216 63.0
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 5.3e-66 255.0 215 63.3
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 6.9e-66 254.6 215 62.8
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 9.0e-66 254.2 218 62.4
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 9.0e-66 254.2 216 62.5
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 1.5e-65 253.4 215 63.7
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 2.0e-65 253.1 216 63.4
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 2.0e-65 253.1 215 62.8
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 2.6e-65 252.7 216 63.9
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 2.6e-65 252.7 217 59.4
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 7.6e-65 251.1 216 61.6
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 9.9e-65 250.8 218 60.6
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 9.9e-65 250.8 217 60.8
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 1.7e-64 250.0 216 60.2
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 2.9e-64 249.2 211 62.1
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 2.9e-64 249.2 213 62.4
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 3.8e-64 248.8 215 59.5
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 4.9e-64 248.4 214 61.7
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 4.9e-64 248.4 216 59.7
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 4.9e-64 248.4 211 62.6
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 6.4e-64 248.1 213 59.2
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 1.9e-63 246.5 214 61.2
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 7.1e-63 244.6 214 59.8
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 7.1e-63 244.6 216 60.6
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 7.1e-63 244.6 216 57.9
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 1.2e-62 243.8 209 63.6
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.2e-62 243.8 216 60.2
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 1.6e-62 243.4 215 59.5
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 1.6e-62 243.4 216 57.9
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 2.1e-62 243.0 217 59.4
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 2.7e-62 242.7 214 61.7
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 2.7e-62 242.7 214 60.7
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 2.7e-62 242.7 217 58.1
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 2.7e-62 242.7 217 58.1
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 3.5e-62 242.3 217 58.1
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 3.5e-62 242.3 214 57.5
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 4.6e-62 241.9 214 60.7
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 4.6e-62 241.9 216 58.8
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 4.6e-62 241.9 216 58.8
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 4.6e-62 241.9 213 60.6
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 4.6e-62 241.9 211 60.7
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 6.0e-62 241.5 216 57.9
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 1.3e-61 240.4 214 58.9
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 2.3e-61 239.6 211 61.1
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 3.0e-61 239.2 214 60.7
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 3.9e-61 238.8 164 78.0
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 3.9e-61 238.8 213 58.2
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 5.1e-61 238.4 209 63.2
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 6.7e-61 238.0 214 61.2
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 8.7e-61 237.7 216 60.6
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 1.1e-60 237.3 214 60.3
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 1.1e-60 237.3 214 60.3
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 1.1e-60 237.3 213 59.2
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.9e-60 236.5 214 58.4
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 1.9e-60 236.5 211 59.2
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 3.3e-60 235.7 215 58.6
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 3.3e-60 235.7 207 60.4
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 3.3e-60 235.7 263 52.9
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 5.6e-60 235.0 216 60.2
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 2.4e-58 229.6 213 59.6
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 4.0e-58 228.8 159 74.8
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 9.3e-55 217.6 158 72.2
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 2.3e-53 213.0 214 50.5
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 1.5e-52 210.3 216 54.6
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 1.9e-52 209.9 159 70.4
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 2.1e-51 206.5 159 68.6
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 2.1e-51 206.5 158 65.2
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 4.0e-50 202.2 212 50.0
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 5.3e-50 201.8 158 67.1
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 4.5e-49 198.7 211 50.7
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 5.8e-49 198.4 159 66.0
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 2.1e-46 189.9 161 60.9
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 3.0e-45 186.0 157 59.9
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 5.7e-44 181.8 216 49.1
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 1.3e-43 180.6 165 55.8
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 1.5e-41 173.7 163 54.0
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 3.4e-41 172.6 219 47.5
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.9e-39 166.8 217 44.7
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 4.2e-39 165.6 133 69.2
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 3.4e-33 146.0 215 40.9
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 5.7e-28 128.6 216 38.0
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 1.4e-26 124.0 209 37.3
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 1.5e-25 120.6 210 39.0
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 2.9e-24 116.3 102 60.8
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 4.1e-18 95.9 62 74.2
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.2e-06 57.8 53 54.7


User provided reference genes

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