Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 5.0e-232 807.4 393 100.0
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 2.6e-180 635.6 398 79.4
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 4.3e-167 591.7 398 72.9
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 1.4e-165 586.6 388 72.9
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 4.6e-161 571.6 390 70.5
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 2.5e-159 565.8 398 70.4
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 6.2e-158 561.2 399 67.9
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 6.2e-158 561.2 399 67.7
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 1.1e-157 560.5 399 68.9
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 8.9e-157 557.4 399 69.7
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 3.4e-156 555.4 399 67.2
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 4.4e-156 555.1 399 67.2
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 5.8e-156 554.7 399 69.2
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 9.9e-156 553.9 401 67.3
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 9.9e-156 553.9 400 67.5
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 9.9e-156 553.9 399 67.9
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 2.9e-155 552.4 398 68.3
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 2.9e-155 552.4 403 67.0
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 4.9e-155 551.6 401 66.8
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 1.4e-154 550.1 390 69.7
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 2.4e-154 549.3 388 70.4
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 2.4e-154 549.3 390 71.3
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 2.4e-154 549.3 401 67.8
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 3.2e-154 548.9 401 67.8
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 3.2e-154 548.9 401 66.8
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 4.1e-154 548.5 403 66.3
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 1.7e-152 543.1 403 67.0
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 3.9e-152 542.0 388 67.8
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 2.5e-151 539.3 389 66.8
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 3.3e-151 538.9 388 67.3
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 2.1e-150 536.2 397 65.0
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 2.1e-150 536.2 389 68.1
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 2.8e-150 535.8 396 68.7
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 4.7e-150 535.0 398 67.3
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 6.9e-149 531.2 388 67.5
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 8.9e-149 530.8 385 66.2
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 1.5e-148 530.0 388 67.3
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 1.5e-148 530.0 398 65.3
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.7e-147 526.6 395 67.6
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 1.7e-147 526.6 404 65.3
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 2.2e-147 526.2 387 66.1
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 2.9e-147 525.8 391 66.0
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 4.9e-147 525.0 388 66.8
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 4.9e-147 525.0 396 67.4
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 8.4e-147 524.2 391 66.5
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 1.4e-146 523.5 372 67.7
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 1.4e-146 523.5 372 67.7
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 1.4e-146 523.5 398 64.6
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 7.1e-146 521.2 387 65.4
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 1.2e-145 520.4 391 66.2
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 6.0e-145 518.1 388 64.7
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 1.0e-144 517.3 400 64.2
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 1.3e-144 516.9 401 63.6
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 1.3e-144 516.9 388 65.7
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 5.1e-144 515.0 395 64.3
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 1.5e-143 513.5 388 65.7
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 2.5e-143 512.7 392 64.0
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 2.5e-143 512.7 394 65.0
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 2.5e-143 512.7 388 65.2
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 8.1e-142 507.7 392 63.5
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 4.0e-141 505.4 382 63.4
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 2.0e-140 503.1 382 67.5
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 2.6e-140 502.7 364 71.2
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 4.5e-140 501.9 392 64.3
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 9.9e-140 500.7 393 63.9
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 1.7e-139 500.0 385 62.6
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 2.3e-136 489.6 385 63.1
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 1.6e-134 483.4 403 62.5
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 2.4e-133 479.6 388 60.6
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 6.9e-133 478.0 388 61.6
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 2.0e-132 476.5 388 61.3
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 1.7e-131 473.4 387 60.2
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 4.9e-131 471.9 390 60.3
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 1.1e-130 470.7 398 60.6
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 2.1e-129 466.5 385 60.0
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 2.7e-129 466.1 383 59.3
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 6.7e-128 461.5 388 60.6
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 1.1e-127 460.7 382 59.2
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 2.5e-127 459.5 382 59.2
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 2.5e-127 459.5 378 60.6
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 3.3e-127 459.1 387 57.9
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 4.3e-127 458.8 381 59.3
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 5.6e-127 458.4 381 58.8
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 5.6e-127 458.4 381 58.8
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 9.6e-127 457.6 345 64.6
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 2.5e-122 443.0 401 55.4
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 1.6e-121 440.3 377 57.6
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 6.0e-121 438.3 388 58.0
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 8.7e-120 434.5 384 58.3
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 1.8e-117 426.8 366 57.7
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 2.6e-116 422.9 354 59.6
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 1.0e-115 421.0 313 66.5
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 1.7e-115 420.2 391 51.9
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 4.5e-108 395.6 353 55.8
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 6.5e-107 391.7 276 67.4
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 2.8e-102 376.3 388 51.0
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 1.8e-101 373.6 259 71.8
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 3.9e-96 355.9 264 67.0
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 4.8e-94 349.0 246 69.9
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 4.5e-92 342.4 392 43.9
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 2.5e-82 310.1 363 44.4
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 4.0e-80 302.8 396 40.9
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 8.8e-80 301.6 191 75.4
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 2.2e-78 297.0 157 88.5
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 5.7e-71 272.3 189 70.4
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 7.5e-63 245.4 195 66.2
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.3e-62 244.6 247 50.6
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.4e-61 241.1 190 63.2
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 3.1e-56 223.4 228 49.1
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 3.5e-52 209.9 196 58.2
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.0e-51 208.4 160 63.8
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 2.5e-50 203.8 150 67.3
Dinv43574 Davidia involucrata HOM05D005798 ORTHO05D007269 6.8e-48 195.7 110 84.5
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 7.5e-47 192.2 152 65.1
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 1.2e-44 184.9 429 30.3
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 2.3e-43 180.6 152 61.2
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 5.6e-42 176.0 135 59.3
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 9.5e-42 175.3 139 62.6
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 6.8e-40 169.1 239 40.2
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 4.4e-39 166.4 350 30.6
CAN.G195.32 Capsicum annuum HOM05D005798 ORTHO05D007269 9.9e-39 165.2 169 51.5
Atru.chr5.134 Acer truncatum HOM05D005798 ORTHO05D007269 9.2e-37 158.7 93 79.6
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 1.1e-34 151.8 365 32.1
Nn3g19415 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.8e-32 144.4 88 75.0
CAN.G74.38 Capsicum annuum HOM05D005798 ORTHO05D007269 4.0e-32 143.3 93 78.5
MCO12G177 Micromonas commoda HOM05D005798 ORTHO05D007269 3.9e-27 126.7 461 26.9
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 1.5e-23 114.8 204 37.7
HPP92_011700 Vanilla planifolia HOM05D005798 ORTHO05D007269 4.5e-23 113.2 221 34.8
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 2.2e-22 110.9 84 64.3
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 7.1e-13 79.3 86 45.3
TAR375G0441 Trochodendron aralioides HOM05D005798 ORTHO05D007269 3.0e-11 73.9 54 64.8
CAN.G195.33 Capsicum annuum HOM05D005798 ORTHO05D007269 2.1e-09 67.8 72 52.8
HanXRQChr11g0349311 Helianthus annuus HOM05D000428 ORTHO05D011602 2.4e-08 64.3 95 43.2


User provided reference genes

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