Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21049 Vaccinium macrocarpon HOM05D000398 ORTHO05D007380 3.2e-53 211.5 104 100.0
CSS0036742 Camellia sinensis var. sinensis HOM05D000398 ORTHO05D007380 5.6e-34 147.5 97 73.2
Actinidia33499 Actinidia chinensis HOM05D000398 ORTHO05D007380 9.6e-34 146.7 97 75.3
Cc02_g24960 Coffea canephora HOM05D000398 ORTHO05D007380 2.6e-31 138.7 78 82.1
GSVIVG01018251001 Vitis vinifera HOM05D000398 ORTHO05D007380 3.4e-31 138.3 94 72.3
Migut.N01751 Erythranthe guttata HOM05D000398 ORTHO05D007380 4.5e-31 137.9 97 69.1
Gohir.D08G159300 Gossypium hirsutum HOM05D000398 ORTHO05D007380 4.5e-31 137.9 94 71.3
Gorai.004G165500 Gossypium raimondii HOM05D000398 ORTHO05D007380 4.5e-31 137.9 94 71.3
SGA_v2.0_scaffold116G32297 Striga asiatica HOM05D000398 ORTHO05D007380 1.7e-30 136.0 97 69.1
Duzib268G1193 Durio zibethinus HOM05D000398 ORTHO05D007380 2.2e-30 135.6 83 78.3
MSTRG.4925 Avicennia marina HOM05D000398 ORTHO05D007380 3.8e-30 134.8 97 71.1
Thecc.01G392900 Theobroma cacao HOM05D000398 ORTHO05D007380 4.9e-30 134.4 97 71.1
Oeu013854.1 Olea europaea HOM05D000398 ORTHO05D007380 6.5e-30 134.0 91 73.6
Nitab4.5_0000210g0010 Nicotiana tabacum HOM05D000398 ORTHO05D007380 5.5e-29 131.0 94 71.3
Aqoxy7G00841 Aquilegia oxysepala HOM05D000398 ORTHO05D007380 9.3e-29 130.2 75 80.0
CiPaw.14G021400 Carya illinoinensis HOM05D000398 ORTHO05D007380 9.3e-29 130.2 86 74.4
FAN10G0900 Fragaria x ananassa HOM05D000398 ORTHO05D007380 9.3e-29 130.2 103 58.3
TWI59G1458 Tripterygium wilfordii HOM05D000398 ORTHO05D007380 9.3e-29 130.2 74 81.1
Duzib138G1527 Durio zibethinus HOM05D000398 ORTHO05D007380 1.2e-28 129.8 97 69.1
CAN.G402.7 Capsicum annuum HOM05D000398 ORTHO05D007380 4.6e-28 127.9 93 69.9
COL.COLO4_12425 Corchorus olitorius HOM05D000398 ORTHO05D007380 4.6e-28 127.9 97 68.0
ECA240G3974 Erigeron canadensis HOM05D000398 ORTHO05D007380 4.6e-28 127.9 72 76.4
TAR629G0639 Trochodendron aralioides HOM05D000398 ORTHO05D007380 4.6e-28 127.9 97 69.1
SalBow5G3242 Salvia bowleyana HOM05D000398 ORTHO05D007380 6.0e-28 127.5 94 67.0
SalBow5G3392 Salvia bowleyana HOM05D000398 ORTHO05D007380 6.0e-28 127.5 94 67.0
Sabra02G0106000 Salix brachista HOM05D000398 ORTHO05D007380 7.9e-28 127.1 92 70.7
Haze_02815 Corylus avellana HOM05D000398 ORTHO05D007380 1.0e-27 126.7 75 76.0
Lsat_1_v5_gn_3_131260 Lactuca sativa HOM05D000398 ORTHO05D007380 1.0e-27 126.7 74 77.0
Cfa011086 Carpinus fangiana HOM05D000398 ORTHO05D007380 1.3e-27 126.3 75 76.0
Potri.002G137000 Populus trichocarpa HOM05D000398 ORTHO05D007380 1.3e-27 126.3 97 68.0
FAN06G0237 Fragaria x ananassa HOM05D000398 ORTHO05D007380 1.8e-27 125.9 78 76.9
FAN06G1092 Fragaria x ananassa HOM05D000398 ORTHO05D007380 1.8e-27 125.9 78 76.9
PGR004G0219 Punica granatum HOM05D000398 ORTHO05D007380 1.8e-27 125.9 77 72.7
FvH4_7g09870 Fragaria vesca HOM05D000398 ORTHO05D007380 2.3e-27 125.6 77 76.6
FAN03G0067 Fragaria x ananassa HOM05D000398 ORTHO05D007380 2.3e-27 125.6 78 74.4
Nitab4.5_0010261g0050 Nicotiana tabacum HOM05D000398 ORTHO05D007380 3.0e-27 125.2 96 67.7
FAN01G0954 Fragaria x ananassa HOM05D000398 ORTHO05D007380 3.9e-27 124.8 97 63.9
FAN10G2655 Fragaria x ananassa HOM05D000398 ORTHO05D007380 5.1e-27 124.4 97 63.9
Sopen10g008350 Solanum pennellii HOM05D000398 ORTHO05D007380 5.1e-27 124.4 93 65.6
HanXRQChr03g0093201 Helianthus annuus HOM05D000398 ORTHO05D007380 6.7e-27 124.0 71 76.1
Hma1.2p1_0041F.1_g025290 Hydrangea macrophylla HOM05D000398 ORTHO05D007380 6.7e-27 124.0 89 71.9
Actinidia12650 Actinidia chinensis HOM05D000398 ORTHO05D007380 1.1e-26 123.2 81 75.3
Eucgr.D01516 Eucalyptus grandis HOM05D000398 ORTHO05D007380 5.7e-26 120.9 78 70.5
Peaxi162Scf00001g00606 Petunia axillaris HOM05D000398 ORTHO05D007380 5.7e-26 120.9 94 63.8
Solyc10g018600.2 Solanum lycopersicum HOM05D000398 ORTHO05D007380 7.4e-26 120.6 93 64.5
AUR62013731 Chenopodium quinoa HOM05D000398 ORTHO05D007380 9.6e-26 120.2 93 63.4
MBI04_g36326_MAGBIO Magnolia biondii HOM05D000398 ORTHO05D007380 1.6e-25 119.4 97 59.8
AUR62023422 Chenopodium quinoa HOM05D000398 ORTHO05D007380 2.1e-25 119.0 93 62.4
RcHm_v2.0_Chr1g0347411 Rosa chinensis HOM05D000398 ORTHO05D007380 2.1e-25 119.0 93 63.4
ATR0057G056 Amborella trichopoda HOM05D000398 ORTHO05D007380 2.8e-25 118.6 90 63.3
Prupe.2G127800 Prunus persica HOM05D000398 ORTHO05D007380 2.8e-25 118.6 94 62.8
MD07G1104100 Malus domestica HOM05D000398 ORTHO05D007380 6.2e-25 117.5 94 63.8
QL04p030906 Quercus lobata HOM05D000398 ORTHO05D007380 6.2e-25 117.5 88 62.5
Ah.05g173210 Amaranthus hybridus HOM05D000398 ORTHO05D007380 1.4e-24 116.3 88 63.6
Sc02g0003000 Simmondsia chinensis HOM05D000398 ORTHO05D007380 1.4e-24 116.3 93 62.4
arahy.Tifrunner.gnm1.ann1.LPB8X1 Arachis hypogaea HOM05D000398 ORTHO05D007380 1.8e-24 115.9 97 58.8
arahy.Tifrunner.gnm1.ann1.X2UHZI Arachis hypogaea HOM05D000398 ORTHO05D007380 1.8e-24 115.9 97 58.8
DCAR_025071 Daucus carota HOM05D000398 ORTHO05D007380 2.4e-24 115.5 97 59.8
MBI15_g33466_MAGBIO Magnolia biondii HOM05D002188 ORTHO05D007380 3.1e-24 115.2 78 64.1
EL10Ac1g00778 Beta vulgaris HOM05D000398 ORTHO05D007380 4.1e-24 114.8 93 61.3
Hund17079 Selenicereus undatus HOM05D000398 ORTHO05D007380 5.3e-24 114.4 93 62.4
Glyma.09G242000 Glycine max HOM05D000398 ORTHO05D007380 6.9e-24 114.0 81 65.4
Cpa.g.sc101.25 Carica papaya HOM05D000398 ORTHO05D007380 9.0e-24 113.6 77 72.7
HanXRQChr04g0119691 Helianthus annuus HOM05D000398 ORTHO05D007380 1.2e-23 113.2 91 62.6
Lj1g0000126 Lotus japonicus HOM05D000398 ORTHO05D007380 1.5e-23 112.8 104 55.8
SalBow5G1348 Salvia bowleyana HOM05D000398 ORTHO05D007380 1.5e-23 112.8 77 72.7
Ca_04034_v3 Cicer arietinum L. HOM05D000398 ORTHO05D007380 2.0e-23 112.5 84 61.9
Lj1g0014152 Lotus japonicus HOM05D000398 ORTHO05D007380 2.0e-23 112.5 74 68.9
Ciclev10019465m.g Citrus clementina HOM05D000398 ORTHO05D007380 3.4e-23 111.7 97 58.8
Lj1g0001539 Lotus japonicus HOM05D000398 ORTHO05D007380 4.5e-23 111.3 72 68.1
Medtr7g007850 Medicago truncatula HOM05D000398 ORTHO05D007380 2.2e-22 109.0 82 62.2
ECA236G0868 Erigeron canadensis HOM05D000398 ORTHO05D007380 2.9e-22 108.6 93 63.4
Lj7C544G9 Lonicera japonica HOM05D000398 ORTHO05D007380 3.8e-22 108.2 76 71.1
PSO675G9072 Papaver somniferum HOM05D000398 ORTHO05D007380 3.8e-22 108.2 76 68.4
TPR.G12285 Trifolium pratense HOM05D000398 ORTHO05D007380 3.8e-22 108.2 73 69.9
PSO732G0452 Papaver somniferum HOM05D000398 ORTHO05D007380 6.5e-22 107.5 76 67.1
ATR0057G036 Amborella trichopoda HOM05D000398 ORTHO05D007380 8.4e-22 107.1 79 63.3
Glyma.18G253600 Glycine max HOM05D000398 ORTHO05D007380 8.4e-22 107.1 94 58.5
Nn1g00883 Nelumbo nucifera HOM05D000398 ORTHO05D007380 1.1e-21 106.7 70 74.3
VMungo1383G2578 Vigna mungo HOM05D000398 ORTHO05D007380 1.1e-21 106.7 81 65.4
ATR0057G132 Amborella trichopoda HOM05D000398 ORTHO05D007380 1.4e-21 106.3 78 62.8
THA.LOC104814069 Tarenaya hassleriana HOM05D000398 ORTHO05D007380 1.4e-21 106.3 79 63.3
Aa31LG5G60 Aethionema arabicum HOM05D000398 ORTHO05D007380 2.5e-21 105.5 67 73.1
Migut.B01548 Erythranthe guttata HOM05D000398 ORTHO05D007380 4.2e-21 104.8 63 73.0
Lalb_Chr19g0126591 Lupinus albus HOM05D000398 ORTHO05D007380 4.2e-21 104.8 81 59.3
Psat3g195640 Pisum sativum HOM05D000398 ORTHO05D007380 4.2e-21 104.8 68 69.1
Lsat_1_v5_gn_7_35701 Lactuca sativa HOM05D000398 ORTHO05D007380 7.2e-21 104.0 97 57.7
Phvul.008G045400 Phaseolus vulgaris HOM05D000398 ORTHO05D007380 7.2e-21 104.0 75 65.3
HPP92_020924 Vanilla planifolia HOM05D000398 ORTHO05D007380 7.2e-21 104.0 86 59.3
Aqoxy7G00840 Aquilegia oxysepala HOM05D000398 ORTHO05D007380 3.5e-20 101.7 58 82.8
SGA_v2.0_scaffold153G36914 Striga asiatica HOM05D000398 ORTHO05D007380 6.1e-20 100.9 78 64.1
AT1G05940 Arabidopsis thaliana HOM05D000398 ORTHO05D007380 7.9e-20 100.5 79 63.3
MSTRG.17136 Avicennia marina HOM05D000398 ORTHO05D007380 1.8e-19 99.4 77 66.2
CDE02G2885 Ceratophyllum demersum HOM05D000398 ORTHO05D007380 2.3e-19 99.0 89 57.3
Os02g0655700 Oryza sativa ssp. japonica HOM05D000398 ORTHO05D007380 3.0e-19 98.6 77 62.3
AL6G53510 Arabidopsis lyrata HOM05D000398 ORTHO05D007380 3.9e-19 98.2 71 63.4
C09p00030 Brassica napus HOM05D000398 ORTHO05D007380 5.1e-19 97.8 71 64.8
BolC9t52938H Brassica oleracea HOM05D000398 ORTHO05D007380 5.1e-19 97.8 71 64.8
BraA09t35677Z Brassica rapa HOM05D000398 ORTHO05D007380 5.1e-19 97.8 71 64.8
Carub.0006s3722 Capsella rubella HOM05D000398 ORTHO05D007380 6.7e-19 97.4 71 63.4
ClCG06G002560 Citrullus lanatus HOM05D000398 ORTHO05D007380 8.7e-19 97.1 93 51.6
SpUn1258_0010 Schrenkiella parvula HOM05D000398 ORTHO05D007380 8.7e-19 97.1 71 64.8
Zm00001eb249380 Zea mays HOM05D000398 ORTHO05D007380 1.5e-18 96.3 100 53.0
SEGI_28511 Sequoiadendron giganteum HOM05D000398 ORTHO05D007380 3.3e-18 95.1 73 65.8
Sed0005777 Sechium edule HOM05D000398 ORTHO05D007380 5.7e-18 94.4 56 78.6
Pp3c14_100 Physcomitrium patens HOM05D000398 ORTHO05D007380 9.7e-18 93.6 98 49.0
THA.LOC104816466 Tarenaya hassleriana HOM05D000398 ORTHO05D007380 6.3e-17 90.9 67 59.7
Gohir.A08G138100 Gossypium hirsutum HOM05D000398 ORTHO05D007380 8.2e-17 90.5 64 67.2
CsaV3_6G008570 Cucumis sativus L. HOM05D000398 ORTHO05D007380 2.4e-16 89.0 96 49.0
SMO340G0037 Selaginella moellendorffii HOM05D000398 ORTHO05D007380 5.1e-11 71.2 76 50.0
CBR_g23144 Chara braunii HOM05D000398 ORTHO05D007380 6.7e-11 70.9 65 47.7
Mapoly0071s0097 Marchantia polymorpha HOM05D000398 ORTHO05D007380 2.5e-10 68.9 80 43.8
Sabra19G0050100 Salix brachista HOM05D000398 ORTHO05D002677 1.3e-06 56.6 53 45.3
MD14G1007600 Malus domestica HOM05D000398 ORTHO05D002677 1.7e-06 56.2 53 45.3
Prupe.7G012500 Prunus persica HOM05D000398 ORTHO05D002677 1.7e-06 56.2 63 42.9
Zm00001eb218400 Zea mays HOM05D000398 ORTHO05D002677 1.7e-06 56.2 95 32.6
Sed0015378 Sechium edule HOM05D000398 ORTHO05D002677 2.2e-06 55.8 70 42.9
MD12G1010500 Malus domestica HOM05D000398 ORTHO05D002677 2.9e-06 55.5 63 41.3
Aqoxy1G00519 Aquilegia oxysepala HOM05D000398 ORTHO05D002677 3.8e-06 55.1 64 37.5
Pp3c1_14670 Physcomitrium patens HOM05D000398 ORTHO05D002677 5.0e-06 54.7 64 42.2
RcHm_v2.0_Chr3g0496211 Rosa chinensis HOM05D000398 ORTHO05D002677 5.0e-06 54.7 53 43.4
Solyc10g081460.2 Solanum lycopersicum HOM05D000398 ORTHO05D002677 5.0e-06 54.7 63 41.3
Sopen10g031960 Solanum pennellii HOM05D000398 ORTHO05D002677 5.0e-06 54.7 63 41.3
Thhalv10027685m.g Eutrema salsugineum HOM05D000398 ORTHO05D002677 8.5e-06 53.9 57 43.9


User provided reference genes

Program Settings