Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro21020 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 6.1e-241 837.0 413 100.0
CSS0047351 Camellia sinensis var. sinensis HOM05D005612 ORTHO05D007014 5.3e-160 568.2 396 73.7
Actinidia12252 Actinidia chinensis HOM05D005612 ORTHO05D007014 1.5e-154 550.1 363 76.6
Dinv43696 Davidia involucrata HOM05D005612 ORTHO05D007014 2.6e-154 549.3 366 77.0
vmacro13411 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 1.2e-151 540.4 396 71.7
Hma1.2p1_2025F.1_g311480 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 3.5e-151 538.9 366 75.4
GSVIVG01027677001 Vitis vinifera HOM05D005612 ORTHO05D007014 3.5e-151 538.9 396 69.7
TAR375G1134 Trochodendron aralioides HOM05D005612 ORTHO05D007014 4.5e-151 538.5 367 74.4
Hma1.2p1_0511F.1_g169190 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 4.2e-149 531.9 366 74.9
DCAR_008555 Daucus carota HOM05D005612 ORTHO05D007014 2.1e-148 529.6 368 72.3
QL08p052678 Quercus lobata HOM05D005612 ORTHO05D007014 2.3e-147 526.2 369 71.8
Aqoxy3G02061 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 3.7e-145 518.8 396 67.2
Nn4g26368 Nelumbo nucifera HOM05D005612 ORTHO05D007014 4.8e-145 518.5 396 66.9
Aqoxy1G04104 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 1.8e-144 516.5 396 66.9
Haze_16797 Corylus avellana HOM05D005612 ORTHO05D007014 3.5e-143 512.3 361 72.0
COL.COLO4_12531 Corchorus olitorius HOM05D005612 ORTHO05D007014 7.7e-143 511.1 366 70.2
Prupe.6G155400 Prunus persica HOM05D005612 ORTHO05D007014 7.7e-143 511.1 397 67.0
CANSAT01G1400 Cannabis sativa HOM05D005612 ORTHO05D007014 1.3e-142 510.4 388 66.8
Thecc.01G378200 Theobroma cacao HOM05D005612 ORTHO05D007014 2.9e-142 509.2 385 68.6
Cfa015219 Carpinus fangiana HOM05D005612 ORTHO05D007014 3.8e-142 508.8 363 71.1
PSO339G2081 Papaver somniferum HOM05D005612 ORTHO05D007014 3.2e-141 505.8 392 66.8
CAN.G530.1 Capsicum annuum HOM05D005612 ORTHO05D007014 4.2e-141 505.4 368 69.6
MSTRG.17178 Avicennia marina HOM05D005612 ORTHO05D007014 9.4e-141 504.2 385 66.2
PSO384G4101 Papaver somniferum HOM05D005612 ORTHO05D007014 1.6e-140 503.4 392 66.1
Ciclev10010228m.g Citrus clementina HOM05D005612 ORTHO05D007014 2.7e-140 502.7 387 67.2
Atru.chr2.2479 Acer truncatum HOM05D005612 ORTHO05D007014 3.6e-140 502.3 396 64.9
Sopen08g002560 Solanum pennellii HOM05D005612 ORTHO05D007014 2.3e-139 499.6 369 68.3
Potri.014G068500 Populus trichocarpa HOM05D005612 ORTHO05D007014 3.0e-139 499.2 360 70.0
Solyc08g006610.3 Solanum lycopersicum HOM05D005612 ORTHO05D007014 5.2e-139 498.4 369 68.0
Duzib138G1608 Durio zibethinus HOM05D005612 ORTHO05D007014 8.8e-139 497.7 384 68.0
RcHm_v2.0_Chr3g0497141 Rosa chinensis HOM05D005612 ORTHO05D007014 1.2e-138 497.3 345 72.5
Cpa.g.sc18.108 Carica papaya HOM05D005612 ORTHO05D007014 2.6e-138 496.1 383 65.5
Gorai.004G162600 Gossypium raimondii HOM05D005612 ORTHO05D007014 1.3e-137 493.8 361 69.8
Nitab4.5_0000264g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 1.7e-137 493.4 368 67.7
Cc02_g24020 Coffea canephora HOM05D005612 ORTHO05D007014 8.3e-137 491.1 397 64.0
Migut.B01623 Erythranthe guttata HOM05D005612 ORTHO05D007014 8.3e-137 491.1 367 66.5
Gohir.D08G156300 Gossypium hirsutum HOM05D005612 ORTHO05D007014 8.3e-137 491.1 415 63.4
Sed0014004 Sechium edule HOM05D005612 ORTHO05D007014 2.4e-136 489.6 390 64.9
FAN28G0581 Fragaria x ananassa HOM05D005612 ORTHO05D007014 3.1e-136 489.2 345 70.4
TWI14G1300 Tripterygium wilfordii HOM05D005612 ORTHO05D007014 3.1e-136 489.2 367 68.9
TPR.G17234 Trifolium pratense HOM05D005612 ORTHO05D007014 4.1e-136 488.8 364 69.8
CsaV3_3G009760 Cucumis sativus L. HOM05D005612 ORTHO05D007014 5.4e-136 488.4 390 64.6
CiPaw.01G263000 Carya illinoinensis HOM05D005612 ORTHO05D007014 7.0e-136 488.0 380 66.3
Eucgr.E01443 Eucalyptus grandis HOM05D005612 ORTHO05D007014 9.1e-136 487.6 367 67.6
Oeu055499.1 Olea europaea HOM05D005612 ORTHO05D007014 1.2e-135 487.3 354 69.2
Lalb_Chr03g0039601 Lupinus albus HOM05D005612 ORTHO05D007014 2.7e-135 486.1 368 67.1
SalBow5G3218 Salvia bowleyana HOM05D005612 ORTHO05D007014 3.5e-135 485.7 364 67.0
FvH4_1g28100 Fragaria vesca HOM05D005612 ORTHO05D007014 4.5e-135 485.3 345 70.1
Gohir.A08G135500 Gossypium hirsutum HOM05D005612 ORTHO05D007014 5.9e-135 485.0 385 66.0
FAN28G2973 Fragaria x ananassa HOM05D005612 ORTHO05D007014 7.7e-135 484.6 345 70.1
Manes.05G046700 Manihot esculenta HOM05D005612 ORTHO05D007014 1.3e-134 483.8 368 67.1
Phvul.011G138100 Phaseolus vulgaris HOM05D005612 ORTHO05D007014 2.2e-134 483.0 366 67.2
Peaxi162Scf00045g01936 Petunia axillaris HOM05D005612 ORTHO05D007014 2.9e-134 482.6 368 68.2
FAN23G2738 Fragaria x ananassa HOM05D005612 ORTHO05D007014 6.5e-134 481.5 345 69.6
Lj3g0004128 Lotus japonicus HOM05D005612 ORTHO05D007014 4.2e-133 478.8 364 67.3
Psat0s2995g0040 Pisum sativum HOM05D005612 ORTHO05D007014 5.5e-133 478.4 363 67.2
FAN26G0204 Fragaria x ananassa HOM05D005612 ORTHO05D007014 7.2e-133 478.0 367 66.2
Manes.01G266600 Manihot esculenta HOM05D005612 ORTHO05D007014 9.4e-133 477.6 367 67.3
Medtr4g053430 Medicago truncatula HOM05D005612 ORTHO05D007014 1.2e-132 477.2 349 69.6
THA.LOC104827614 Tarenaya hassleriana HOM05D005612 ORTHO05D007014 2.7e-132 476.1 395 61.5
ClCG05G002330 Citrullus lanatus HOM05D005612 ORTHO05D007014 8.0e-132 474.6 405 62.2
Lalb_Chr01g0021461 Lupinus albus HOM05D005612 ORTHO05D007014 1.4e-131 473.8 362 67.1
AUR62000130 Chenopodium quinoa HOM05D005612 ORTHO05D007014 3.0e-131 472.6 397 62.5
MD00G1094900 Malus domestica HOM05D005612 ORTHO05D007014 3.0e-131 472.6 374 66.3
PGR042G0232 Punica granatum HOM05D005612 ORTHO05D007014 1.2e-130 470.7 356 66.9
Glyma.12G134000 Glycine max HOM05D005612 ORTHO05D007014 9.8e-130 467.6 363 66.4
Carub.0004s2795 Capsella rubella HOM05D005612 ORTHO05D007014 4.9e-129 465.3 365 63.0
Lsat_1_v5_gn_7_9741 Lactuca sativa HOM05D005612 ORTHO05D007014 6.3e-129 464.9 381 63.0
EL10Ac4g10240 Beta vulgaris HOM05D005612 ORTHO05D007014 8.3e-129 464.5 395 61.5
Glyma.06G270700 Glycine max HOM05D005612 ORTHO05D007014 9.2e-128 461.1 365 65.8
ECA236G2759 Erigeron canadensis HOM05D005612 ORTHO05D007014 1.0e-126 457.6 365 62.7
Lj7C530T5 Lonicera japonica HOM05D005612 ORTHO05D007014 1.0e-126 457.6 428 59.3
arahy.Tifrunner.gnm1.ann1.39QM8U Arachis hypogaea HOM05D005612 ORTHO05D007014 2.3e-126 456.4 363 66.1
arahy.Tifrunner.gnm1.ann1.Q1YE57 Arachis hypogaea HOM05D005612 ORTHO05D007014 5.0e-126 455.3 363 66.1
HanXRQChr04g0122751 Helianthus annuus HOM05D005612 ORTHO05D007014 8.6e-126 454.5 365 64.4
unitig_749.g14376 Utricularia gibba HOM05D005612 ORTHO05D007014 4.3e-125 452.2 367 63.5
Hund07502 Selenicereus undatus HOM05D005612 ORTHO05D007014 5.6e-125 451.8 420 57.9
Lsat_1_v5_gn_8_86120 Lactuca sativa HOM05D005612 ORTHO05D007014 2.1e-124 449.9 379 62.0
AL4G44420 Arabidopsis lyrata HOM05D005612 ORTHO05D007014 2.8e-124 449.5 343 65.6
Ca_19396_v3 Cicer arietinum L. HOM05D005612 ORTHO05D007014 4.7e-124 448.7 352 64.5
AT2G45320 Arabidopsis thaliana HOM05D005612 ORTHO05D007014 1.0e-123 447.6 344 65.4
Thhalv10001485m.g Eutrema salsugineum HOM05D005612 ORTHO05D007014 1.8e-123 446.8 360 63.6
Sabra14G0048200 Salix brachista HOM05D005612 ORTHO05D007014 1.2e-122 444.1 355 65.4
Sp4g27340 Schrenkiella parvula HOM05D005612 ORTHO05D007014 2.9e-121 439.5 365 60.8
Nitab4.5_0005450g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 6.4e-121 438.3 285 76.1
BraA03t11718Z Brassica rapa HOM05D005612 ORTHO05D007014 1.1e-120 437.6 391 59.1
A03p25180 Brassica napus HOM05D005612 ORTHO05D007014 1.4e-120 437.2 350 62.6
BcaB01g03271 Brassica carinata HOM05D005612 ORTHO05D007014 7.0e-120 434.9 389 58.4
BcaC01g05140 Brassica carinata HOM05D005612 ORTHO05D007014 2.0e-119 433.3 347 62.8
BolC3t15349H Brassica oleracea HOM05D005612 ORTHO05D007014 2.0e-119 433.3 347 62.8
C03p30020 Brassica napus HOM05D005612 ORTHO05D007014 4.6e-119 432.2 390 58.7
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 1.1e-117 427.6 321 67.0
Ah.04g161950 Amaranthus hybridus HOM05D004275 ORTHO05D005720 1.2e-114 417.5 413 55.0
AUR62019310 Chenopodium quinoa HOM05D005612 ORTHO05D007014 4.1e-112 409.1 265 74.3
Sc16g0011470 Simmondsia chinensis HOM05D005612 ORTHO05D007014 1.1e-109 401.0 352 59.9
MELO3C006197.2 Cucumis melo HOM05D005612 ORTHO05D007014 6.2e-108 395.2 335 60.6
VMungo1127G0102 Vigna mungo HOM05D005612 ORTHO05D007014 2.3e-107 393.3 253 75.1
Zm00001eb195050 Zea mays HOM05D005612 ORTHO05D007014 2.3e-107 393.3 342 59.6
CDE07G1659 Ceratophyllum demersum HOM05D005612 ORTHO05D007014 3.5e-103 379.4 325 59.4
ATR1100G025 Amborella trichopoda HOM05D005612 ORTHO05D007014 5.4e-96 355.5 304 59.2
unitig_76.g29085 Utricularia gibba HOM05D005612 ORTHO05D007014 6.0e-95 352.1 346 54.6
MBI14_g08144_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 3.0e-94 349.7 265 68.7
ATR0686G054 Amborella trichopoda HOM05D005612 ORTHO05D007014 5.1e-86 322.4 250 64.0
CARHR140520 Cardamine hirsuta HOM05D005612 ORTHO05D007014 3.3e-85 319.7 203 75.9
Aa31LG1G26830 Aethionema arabicum HOM05D005612 ORTHO05D007014 1.8e-83 313.9 187 79.1
CiPaw.09G176500 Carya illinoinensis HOM05D005612 ORTHO05D007014 6.4e-81 305.4 324 51.9
Duzib138G0844 Durio zibethinus HOM05D005612 ORTHO05D007014 5.3e-75 285.8 165 83.6
SGA_v2.0_scaffold153G37000 Striga asiatica HOM05D005612 ORTHO05D007014 1.5e-69 267.7 186 71.0
SMO119G0175 Selaginella moellendorffii HOM05D005612 ORTHO05D007014 2.4e-67 260.4 279 46.2
Dinv32369 Davidia involucrata HOM05D005612 ORTHO05D007014 3.2e-64 250.0 216 62.0
Zm00001eb012290 Zea mays HOM05D005612 ORTHO05D007014 2.1e-63 247.3 188 62.2
Zm00001eb249030 Zea mays HOM05D005612 ORTHO05D007014 2.7e-63 246.9 177 66.7
FAN19G0199 Fragaria x ananassa HOM05D005612 ORTHO05D007014 5.3e-59 232.6 132 84.1
AagrBONN_evm.TU.Sc2ySwM_117.669 Anthoceros agrestis HOM05D005612 ORTHO05D007014 2.5e-53 213.8 217 48.4
Pp3c17_6010 Physcomitrium patens HOM05D005612 ORTHO05D007014 1.5e-50 204.5 187 52.9
MSTRG.28297 Avicennia marina HOM05D005612 ORTHO05D007014 4.5e-50 203.0 115 82.6
Medtr8g102045 Medicago truncatula HOM05D005612 ORTHO05D007014 8.2e-44 182.2 127 72.4
Rhsim01G0149000 Rhododendron simsii HOM05D005612 ORTHO05D007014 1.4e-40 171.4 243 43.6
Zm00001eb385140 Zea mays HOM05D005612 ORTHO05D007014 5.2e-38 162.9 133 59.4
Medtr8g102040 Medicago truncatula HOM05D005612 ORTHO05D007014 3.3e-37 160.2 129 63.6
Zm00001eb084960 Zea mays HOM05D005612 ORTHO05D007014 5.7e-37 159.5 133 58.6
Oeu011925.1 Olea europaea HOM05D005612 ORTHO05D007014 1.2e-34 151.8 200 44.0
CARHR140530 Cardamine hirsuta HOM05D005612 ORTHO05D007014 2.3e-30 137.5 158 46.2
Zm00001eb270960 Zea mays HOM05D005612 ORTHO05D002685 2.0e-29 134.4 84 73.8
Glyma.20G076400 Glycine max HOM05D005612 ORTHO05D007014 1.3e-25 121.7 75 70.7
TAR626G0370 Trochodendron aralioides HOM05D005612 ORTHO05D007014 2.2e-25 120.9 63 90.5
SEGI_33395 Sequoiadendron giganteum HOM05D005612 ORTHO05D007014 9.4e-24 115.5 144 47.9
Haze_18350 Corylus avellana HOM05D005612 ORTHO05D007014 5.2e-22 109.8 71 76.1
Zm00001eb321930 Zea mays HOM05D005612 ORTHO05D007014 2.0e-21 107.8 103 52.4
Gohir.A08G135200 Gossypium hirsutum HOM05D005612 ORTHO05D007014 4.5e-18 96.7 194 36.6
Gohir.A08G135550 Gossypium hirsutum HOM05D005612 ORTHO05D007014 1.3e-17 95.1 193 36.3
MBI14_g08143_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 1.2e-15 88.6 110 44.5
Dinv39084 Davidia involucrata HOM05D005612 ORTHO05D007014 3.1e-11 73.9 105 40.0
MD15G1255900 Malus domestica HOM05D001392 ORTHO05D036605 4.1e-11 73.6 47 80.9
Lalb_Chr08g0243441 Lupinus albus HOM05D005612 ORTHO05D007014 1.0e-09 68.9 47 74.5
Os06g0571300 Oryza sativa ssp. japonica HOM05D005612 ORTHO05D007014 1.3e-09 68.6 90 44.4
Medtr8g102042 Medicago truncatula HOM05D005612 ORTHO05D007014 1.6e-07 61.6 66 48.5


User provided reference genes

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