Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 3.2e-190 668.3 353 100.0
vmacro20995 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 8.0e-56 221.9 179 78.8
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 4.1e-52 209.5 357 42.0
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 4.5e-51 206.1 154 80.5
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 1.2e-40 171.4 357 38.4
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 2.2e-37 160.6 358 38.5
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 4.9e-37 159.5 358 38.3
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 9.2e-36 155.2 355 37.7
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 7.8e-35 152.1 351 36.5
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 1.5e-33 147.9 355 34.9
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 4.7e-32 142.9 355 33.0
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 1.1e-31 141.7 356 34.3
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 1.8e-31 141.0 355 33.8
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 6.8e-31 139.0 350 34.6
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 1.5e-30 137.9 355 39.4
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 1.5e-30 137.9 354 34.2
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 2.0e-30 137.5 351 33.9
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 2.6e-30 137.1 357 36.7
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 9.8e-30 135.2 353 32.6
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 2.9e-29 133.7 352 33.0
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 2.9e-29 133.7 353 32.3
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 8.3e-29 132.1 356 35.4
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 1.1e-28 131.7 355 35.5
PSO782G3084 Papaver somniferum HOM05D006684 ORTHO05D008443 1.1e-28 131.7 162 56.2
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 1.4e-28 131.3 356 36.8
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 2.4e-28 130.6 351 35.6
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 3.2e-28 130.2 355 35.2
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 2.0e-27 127.5 353 33.7
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 3.5e-27 126.7 354 35.6
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 1.0e-26 125.2 355 31.8
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 1.3e-26 124.8 355 34.9
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.3e-26 124.8 355 34.9
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.3e-26 124.8 355 34.9
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.7e-26 124.4 355 34.9
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 1.7e-26 124.4 352 30.4
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 1.9e-25 120.9 351 30.8
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 3.3e-25 120.2 109 66.1
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 3.3e-25 120.2 108 63.0
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 7.3e-25 119.0 99 62.6
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 9.5e-25 118.6 355 35.8
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 1.6e-24 117.9 351 31.9
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 2.1e-24 117.5 354 36.4
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 2.1e-24 117.5 354 34.5
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 3.6e-24 116.7 357 33.9
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 6.2e-24 115.9 352 31.8
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 6.2e-24 115.9 365 34.8
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 3.1e-23 113.6 355 29.3
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 4.0e-23 113.2 354 30.8
Actinidia33456 Actinidia chinensis HOM05D006684 ORTHO05D008443 6.8e-23 112.5 269 33.8
Duzib138G0092 Durio zibethinus HOM05D006684 ORTHO05D008443 6.8e-23 112.5 102 62.7
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 6.8e-23 112.5 106 54.7
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 1.2e-22 111.7 354 33.3
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 1.2e-22 111.7 346 34.4
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 2.0e-22 110.9 353 32.0
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 2.0e-22 110.9 352 31.8
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 2.6e-22 110.5 357 31.9
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 3.4e-22 110.2 357 32.8
CAN.G333.1 Capsicum annuum HOM05D006684 ORTHO05D008443 9.9e-22 108.6 100 62.0
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 1.3e-21 108.2 353 30.3
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 1.7e-21 107.8 354 32.2
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 2.9e-21 107.1 353 32.0
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 4.9e-21 106.3 356 31.5
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 6.4e-21 105.9 353 30.6
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 1.1e-20 105.1 353 31.2
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 1.9e-20 104.4 347 28.8
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 1.9e-20 104.4 352 30.7
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 2.4e-20 104.0 108 54.6
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 4.1e-20 103.2 358 34.1
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 5.4e-20 102.8 356 34.0
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 5.4e-20 102.8 350 31.7
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 5.4e-20 102.8 356 29.8
Solyc05g048750.3 Solanum lycopersicum HOM05D006684 ORTHO05D008443 5.4e-20 102.8 156 43.6
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 7.1e-20 102.4 106 58.5
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 7.1e-20 102.4 358 31.8
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 7.1e-20 102.4 347 28.8
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 1.6e-19 101.3 351 32.5
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 2.1e-19 100.9 356 29.5
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 2.7e-19 100.5 107 56.1
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 3.5e-19 100.1 356 32.6
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 7.8e-19 99.0 353 30.0
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 7.8e-19 99.0 350 30.6
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 7.8e-19 99.0 356 30.6
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 1.7e-18 97.8 163 41.7
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 1.7e-18 97.8 347 30.3
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 2.3e-18 97.4 354 31.4
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 5.1e-18 96.3 61 73.8
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 8.6e-18 95.5 167 47.3
Oeu036610.1 Olea europaea HOM05D006684 ORTHO05D008443 2.5e-17 94.0 80 62.5
TWI23G1019 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 2.5e-17 94.0 106 51.9
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 5.6e-17 92.8 354 29.7
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 9.5e-17 92.0 350 29.7
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 1.2e-16 91.7 356 28.9
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 1.6e-16 91.3 350 27.4
Duzib138G0657 Durio zibethinus HOM05D006684 ORTHO05D008443 2.8e-16 90.5 129 47.3
unitig_578.g16483 Utricularia gibba HOM05D006684 ORTHO05D008443 2.8e-16 90.5 108 50.9
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 4.7e-16 89.7 352 31.5
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 1.8e-15 87.8 141 44.7
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 2.4e-15 87.4 107 53.3
Ca_07836_v3 Cicer arietinum L. HOM05D006684 ORTHO05D008443 3.1e-15 87.0 70 60.0
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 5.2e-15 86.3 102 52.9
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 6.8e-15 85.9 87 56.3
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 8.9e-15 85.5 347 29.7
Manes.12G053501 Manihot esculenta HOM05D006684 ORTHO05D008443 8.9e-15 85.5 350 25.7
Manes.12G048301 Manihot esculenta HOM05D006684 ORTHO05D008443 1.5e-14 84.7 350 25.4
Psat3g104080 Pisum sativum HOM05D006684 ORTHO05D008443 5.8e-14 82.8 71 57.7
Haze_16738 Corylus avellana HOM05D006684 ORTHO05D008443 7.6e-14 82.4 53 77.4
Ah.07g198740 Amaranthus hybridus HOM05D006684 ORTHO05D008443 6.4e-13 79.3 314 29.6
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 1.1e-12 78.6 336 28.0
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 1.1e-12 78.6 154 40.3
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 2.1e-11 74.3 64 62.5
Zm00001eb269540 Zea mays HOM05D006684 ORTHO05D008443 2.7e-11 73.9 86 51.2
Hma1.2p1_0053F.1_g030890 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 1.3e-10 71.6 72 58.3
MBI12_g38018_MAGBIO Magnolia biondii HOM05D006684 ORTHO05D008443 1.7e-10 71.2 45 75.6
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 6.6e-10 69.3 102 45.1
HPP92_020257 Vanilla planifolia HOM05D006684 ORTHO05D008443 4.7e-08 63.2 72 50.0
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 1.8e-07 61.2 104 43.3
SMO347G0023 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 1.2e-06 58.5 97 44.3
Pp3c22_10350 Physcomitrium patens HOM05D006684 ORTHO05D008443 2.6e-06 57.4 98 38.8


User provided reference genes

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