Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 6.6e-157 557.4 291 100.0
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 2.5e-124 449.1 293 81.6
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 2.6e-89 332.8 302 64.9
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 2.8e-83 312.8 309 65.4
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 4.7e-70 268.9 302 57.3
Actinidia20887 Actinidia chinensis HOM05D006343 ORTHO05D005694 3.0e-48 196.4 299 46.8
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 1.3e-43 181.0 312 45.5
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla HOM05D006343 ORTHO05D005694 1.7e-40 170.6 312 42.9
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 1.1e-39 167.9 300 41.7
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 3.4e-36 156.4 316 39.6
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 8.4e-35 151.8 318 40.6
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 4.6e-33 146.0 332 37.0
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 3.9e-32 142.9 336 37.8
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 6.6e-32 142.1 325 37.8
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 1.1e-31 141.4 304 39.8
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 3.3e-31 139.8 231 45.0
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 1.6e-30 137.5 303 37.3
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 1.6e-30 137.5 331 38.7
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 2.1e-30 137.1 333 38.4
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 6.2e-30 135.6 304 38.5
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 1.8e-29 134.0 314 39.8
Oeu035731.1 Olea europaea HOM05D006343 ORTHO05D005694 4.0e-29 132.9 316 36.1
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 6.9e-29 132.1 324 36.7
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 2.0e-28 130.6 331 36.6
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 2.0e-28 130.6 328 38.4
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 3.4e-28 129.8 318 38.7
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 4.4e-28 129.4 314 38.9
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 2.2e-27 127.1 292 36.3
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 1.4e-26 124.4 320 35.9
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 2.4e-26 123.6 349 33.2
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 1.0e-24 118.2 314 32.5
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.3e-24 117.9 322 33.9
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.7e-24 117.5 325 32.3
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 3.0e-24 116.7 350 30.9
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.9e-24 116.3 322 33.5
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 3.9e-24 116.3 319 37.3
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 5.1e-24 115.9 323 33.4
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 3.3e-23 113.2 326 33.7
Lsat_1_v5_gn_7_4060 Lactuca sativa HOM05D006343 ORTHO05D005694 5.6e-23 112.5 283 33.2
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 5.6e-23 112.5 319 34.5
SGA_v2.0_scaffold1G00635 Striga asiatica HOM05D006343 ORTHO05D005694 1.3e-22 111.3 347 33.1
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 4.8e-22 109.4 307 36.2
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 1.4e-21 107.8 239 36.0
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.4e-21 107.8 309 31.4
Cc02_g38320 Coffea canephora HOM05D006343 ORTHO05D005694 1.8e-21 107.5 330 30.6
DCAR_015699 Daucus carota HOM05D006343 ORTHO05D005694 2.4e-21 107.1 266 35.0
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 3.1e-21 106.7 319 31.7
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 3.1e-21 106.7 309 36.9
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.0e-21 106.3 323 31.6
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 5.3e-21 105.9 345 33.6
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 1.5e-20 104.4 340 32.9
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 1.5e-20 104.4 327 32.4
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 3.4e-20 103.2 336 29.2
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 9.9e-20 101.7 313 36.4
Oeu035728.1 Olea europaea HOM05D006343 ORTHO05D005694 6.4e-19 99.0 279 35.1
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 8.4e-19 98.6 332 34.6
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 1.1e-18 98.2 325 34.5
Nitab4.5_0003369g0030 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.1e-18 98.2 318 31.4
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 1.6e-17 94.4 228 35.5
COL.COLO4_12739 Corchorus olitorius HOM05D006343 ORTHO05D005694 2.1e-17 94.0 315 38.1
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.1e-17 94.0 331 31.4
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 2.7e-17 93.6 338 27.5
Duzib138G0695 Durio zibethinus HOM05D006343 ORTHO05D005694 2.7e-17 93.6 314 36.3
Gorai.007G101600 Gossypium raimondii HOM05D006343 ORTHO05D005694 2.7e-17 93.6 310 34.8
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 3.5e-17 93.2 309 31.1
unitig_22.g5289 Utricularia gibba HOM05D006343 ORTHO05D005694 3.5e-17 93.2 291 37.5
Nitab4.5_0002749g0010 Nicotiana tabacum HOM05D006343 ORTHO05D005694 6.0e-17 92.4 318 30.8
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 7.9e-17 92.0 252 33.7
Sed0018743 Sechium edule HOM05D006343 ORTHO05D005694 1.3e-16 91.3 310 34.8
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.8e-16 90.9 329 32.5
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.3e-16 90.5 284 32.4
THA.LOC104825850 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 8.7e-16 88.6 343 31.8
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.1e-15 88.2 323 30.7
Lj3g0021957 Lotus japonicus HOM05D006343 ORTHO05D005694 1.1e-15 88.2 238 34.9
CAN.G2424.1 Capsicum annuum HOM05D006343 ORTHO05D005694 2.5e-15 87.0 362 27.3
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 4.3e-15 86.3 339 28.6
DCAR_015701 Daucus carota HOM05D006343 ORTHO05D005694 5.6e-15 85.9 298 30.9
CAN.G650.35 Capsicum annuum HOM05D006343 ORTHO05D005694 7.4e-15 85.5 331 27.8
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 9.6e-15 85.1 337 27.6
TWI23G0998 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 9.6e-15 85.1 309 32.4
Cpa.g.sc11.35 Carica papaya HOM05D006343 ORTHO05D005694 3.7e-14 83.2 321 32.4
CARHR248400 Cardamine hirsuta HOM05D012121 ORTHO05D005694 6.2e-14 82.4 346 29.8
Gohir.D11G095300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 6.2e-14 82.4 325 32.0
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 8.1e-14 82.0 257 29.2
Sc01g0003550 Simmondsia chinensis HOM05D006343 ORTHO05D005694 1.1e-13 81.6 296 31.1
BcaB01g02239 Brassica carinata HOM05D012121 ORTHO05D005694 1.8e-13 80.9 344 28.2
Duzib133G0920 Durio zibethinus HOM05D006343 ORTHO05D005694 2.6e-12 77.0 305 30.8
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.4e-12 76.6 363 30.0
AT4G00310 Arabidopsis thaliana HOM05D012121 ORTHO05D005694 7.6e-12 75.5 338 27.2
AL6G53170 Arabidopsis lyrata HOM05D012121 ORTHO05D005694 1.0e-11 75.1 336 27.1
Sp6g00380 Schrenkiella parvula HOM05D012121 ORTHO05D005694 1.7e-11 74.3 337 27.3
TWI14G1134 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 2.9e-11 73.6 277 31.8
Thecc.01G356100 Theobroma cacao HOM05D006343 ORTHO05D005694 4.9e-11 72.8 304 31.6
Migut.D00457 Erythranthe guttata HOM05D006343 ORTHO05D005694 1.4e-10 71.2 182 39.6
Cfa003895 Carpinus fangiana HOM05D006343 ORTHO05D005694 1.9e-10 70.9 303 28.1
MELO3C021196.2 Cucumis melo HOM05D006343 ORTHO05D005694 1.9e-10 70.9 312 32.7
ECA233G1044 Erigeron canadensis HOM05D006343 ORTHO05D005694 2.5e-10 70.5 273 28.9
Actinidia10044 Actinidia chinensis HOM05D006343 ORTHO05D005694 3.2e-10 70.1 130 40.0
Thhalv10028840m.g Eutrema salsugineum HOM05D012121 ORTHO05D005694 3.2e-10 70.1 342 26.3
Aqoxy7G00256 Aquilegia oxysepala HOM05D006343 ORTHO05D005694 2.1e-09 67.4 331 27.5
CDE02G1832 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 2.1e-09 67.4 266 27.4
PSO478G4526 Papaver somniferum HOM05D020029 ORTHO05D005694 6.0e-09 65.9 210 31.9
PGR042G0313 Punica granatum HOM05D006343 ORTHO05D005694 1.3e-08 64.7 185 31.4
FAN01G2602 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.0e-08 63.5 215 34.0
Potri.014G099800 Populus trichocarpa HOM05D006343 ORTHO05D005694 3.0e-08 63.5 180 31.7
PGSC0003DMG400008290 Solanum tuberosum HOM05D006343 ORTHO05D005694 3.9e-08 63.2 205 31.7
Carub.0006s3693 Capsella rubella HOM05D012121 ORTHO05D005694 6.7e-08 62.4 328 26.8
Sc01g0003560 Simmondsia chinensis HOM05D006343 ORTHO05D005694 1.5e-07 61.2 188 35.1
BcaC04g24184 Brassica carinata HOM05D012121 ORTHO05D005694 1.9e-07 60.8 337 27.9
C09p00270 Brassica napus HOM05D012121 ORTHO05D005694 1.9e-07 60.8 337 28.8
BolC9t52962H Brassica oleracea HOM05D012121 ORTHO05D005694 1.9e-07 60.8 337 27.9
FvH4_7g14880 Fragaria vesca HOM05D006343 ORTHO05D005694 3.3e-07 60.1 119 32.8
Medtr8g028845 Medicago truncatula HOM05D006343 ORTHO05D005694 4.3e-07 59.7 308 32.1
Solyc03g095830.3 Solanum lycopersicum HOM05D064734 ORTHO05D005694 4.3e-07 59.7 230 27.8
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 4.3e-07 59.7 292 29.5
Medtr3g015950 Medicago truncatula HOM05D006343 ORTHO05D005694 9.6e-07 58.5 304 29.3
Gohir.D08G153300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 1.3e-06 58.2 295 29.5
FAN06G3127 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.6e-06 57.8 119 31.1
Haze_15537 Corylus avellana HOM05D006343 ORTHO05D005694 2.1e-06 57.4 94 38.3
EL10Ac1g00388 Beta vulgaris HOM05D029301 ORTHO05D005694 2.8e-06 57.0 316 28.2
FAN10G1634 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.2e-06 55.8 119 30.3
FAN10G3360 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.2e-06 55.8 119 30.3


User provided reference genes

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