Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20825 Vaccinium macrocarpon HOM05D006970 ORTHO05D008332 1.7e-105 386.0 190 100.0
Rhsim01G0118800 Rhododendron simsii HOM05D006970 ORTHO05D008332 1.2e-82 310.1 189 81.0
CiPaw.07G196100 Carya illinoinensis HOM05D006970 ORTHO05D008332 3.6e-47 192.2 189 55.6
QL02p047741 Quercus lobata HOM05D006970 ORTHO05D008332 1.8e-46 189.9 186 54.3
Thecc.09G184300 Theobroma cacao HOM05D006970 ORTHO05D008332 2.4e-46 189.5 184 54.9
Peaxi162Scf00324g00005 Petunia axillaris HOM05D006970 ORTHO05D008332 9.0e-46 187.6 179 54.7
Cfa013442 Carpinus fangiana HOM05D006970 ORTHO05D008332 1.2e-45 187.2 187 51.3
TAR626G0909 Trochodendron aralioides HOM05D006970 ORTHO05D008332 1.5e-45 186.8 190 53.7
Dinv41166 Davidia involucrata HOM05D006970 ORTHO05D008332 4.5e-45 185.3 156 60.9
Peaxi162Scf00324g10017 Petunia axillaris HOM05D006970 ORTHO05D008332 5.8e-45 184.9 179 54.2
Cfa013441 Carpinus fangiana HOM05D006970 ORTHO05D008332 4.9e-44 181.8 183 49.7
TAR383G0018 Trochodendron aralioides HOM05D006970 ORTHO05D008332 4.9e-44 181.8 183 54.6
Prupe.1G076900 Prunus persica HOM05D006970 ORTHO05D008332 5.5e-43 178.3 203 48.3
Haze_22007 Corylus avellana HOM05D006970 ORTHO05D008332 2.1e-42 176.4 179 50.3
CiPaw.08G033400 Carya illinoinensis HOM05D006970 ORTHO05D008332 2.7e-42 176.0 187 50.8
Oeu015404.1 Olea europaea HOM05D006970 ORTHO05D008332 2.7e-42 176.0 191 51.8
RcHm_v2.0_Chr4g0399841 Rosa chinensis HOM05D006970 ORTHO05D008332 4.6e-42 175.3 189 49.7
Glyma.15G164800 Glycine max HOM05D006970 ORTHO05D008332 6.0e-42 174.9 185 50.8
Manes.06G020600 Manihot esculenta HOM05D006970 ORTHO05D008332 6.0e-42 174.9 187 47.1
Haze_22006 Corylus avellana HOM05D006970 ORTHO05D008332 1.0e-41 174.1 182 48.4
Psat1g144640 Pisum sativum HOM05D006970 ORTHO05D008332 1.3e-41 173.7 189 51.3
Haze_22008 Corylus avellana HOM05D006970 ORTHO05D008332 3.0e-41 172.6 172 50.6
Glyma.09G058700 Glycine max HOM05D006970 ORTHO05D008332 3.0e-41 172.6 186 50.0
Cfa013439 Carpinus fangiana HOM05D006970 ORTHO05D008332 5.1e-41 171.8 180 50.0
MD16G1250000 Malus domestica HOM05D006970 ORTHO05D008332 6.7e-41 171.4 210 45.7
Cfa013440 Carpinus fangiana HOM05D006970 ORTHO05D008332 1.1e-40 170.6 186 50.5
FAN07G0294 Fragaria x ananassa HOM05D006970 ORTHO05D008332 4.3e-40 168.7 188 48.4
FvH4_4g07400 Fragaria vesca HOM05D006970 ORTHO05D008332 5.6e-40 168.3 188 48.4
FAN12G3539 Fragaria x ananassa HOM05D006970 ORTHO05D008332 5.6e-40 168.3 188 48.4
FAN22G0526 Fragaria x ananassa HOM05D006970 ORTHO05D008332 5.6e-40 168.3 188 47.9
FAN17G1729 Fragaria x ananassa HOM05D006970 ORTHO05D008332 1.3e-39 167.2 192 48.4
Ca_02084_v3 Cicer arietinum L. HOM05D006970 ORTHO05D008332 1.1e-38 164.1 190 50.5
Ca_02089_v3 Cicer arietinum L. HOM05D006970 ORTHO05D008332 1.1e-38 164.1 190 50.5
VMungo1309G0689 Vigna mungo HOM05D006970 ORTHO05D008332 1.1e-38 164.1 186 47.8
MD13G1243500 Malus domestica HOM05D006970 ORTHO05D008332 2.4e-38 162.9 201 44.3
Medtr2g037760 Medicago truncatula HOM05D006970 ORTHO05D008332 2.4e-38 162.9 189 48.7
Cc06_g21770 Coffea canephora HOM05D006970 ORTHO05D008332 3.1e-38 162.5 189 47.6
Lalb_Chr11g0074841 Lupinus albus HOM05D006970 ORTHO05D008332 5.3e-38 161.8 190 46.3
Duzib168G1017 Durio zibethinus HOM05D006970 ORTHO05D008332 6.9e-38 161.4 185 48.6
PGSC0003DMG400028751 Solanum tuberosum HOM05D006970 ORTHO05D008332 6.9e-38 161.4 188 47.3
Solyc07g008930.1 Solanum lycopersicum HOM05D006970 ORTHO05D008332 4.5e-37 158.7 179 48.6
COL.COLO4_34251 Corchorus olitorius HOM05D006970 ORTHO05D008332 5.8e-37 158.3 195 49.2
Lj6g0012098 Lotus japonicus HOM05D006970 ORTHO05D008332 5.8e-37 158.3 190 49.5
Phvul.009G237000 Phaseolus vulgaris HOM05D006970 ORTHO05D008332 7.6e-37 157.9 183 46.4
Nn8g40876 Nelumbo nucifera HOM05D006970 ORTHO05D008332 1.7e-36 156.8 195 47.2
Atru.chr7.798 Acer truncatum HOM05D006970 ORTHO05D008332 3.8e-36 155.6 189 49.2
Thecc.09G184400 Theobroma cacao HOM05D006970 ORTHO05D008332 4.9e-36 155.2 188 48.9
Gorai.009G002800 Gossypium raimondii HOM05D006970 ORTHO05D008332 6.5e-36 154.8 188 47.3
Glyma.17G060200 Glycine max HOM05D006970 ORTHO05D008332 8.4e-36 154.5 183 47.5
Duzib168G1189 Durio zibethinus HOM05D006970 ORTHO05D008332 1.1e-35 154.1 189 47.1
arahy.Tifrunner.gnm1.ann1.7NZ92R Arachis hypogaea HOM05D006970 ORTHO05D008332 1.4e-35 153.7 208 46.2
Eucgr.C02224 Eucalyptus grandis HOM05D006970 ORTHO05D008332 1.9e-35 153.3 211 46.4
TAR625G0812 Trochodendron aralioides HOM05D006970 ORTHO05D008332 4.2e-35 152.1 180 46.7
Glyma.13G099800 Glycine max HOM05D006970 ORTHO05D008332 7.1e-35 151.4 185 45.9
Eucgr.C00123 Eucalyptus grandis HOM05D006970 ORTHO05D008332 1.2e-34 150.6 207 42.5
Gohir.D05G003200 Gossypium hirsutum HOM05D006970 ORTHO05D008332 1.2e-34 150.6 188 46.8
Lalb_Chr08g0231751 Lupinus albus HOM05D006970 ORTHO05D008332 2.1e-34 149.8 190 47.4
Lalb_Chr08g0231861 Lupinus albus HOM05D006970 ORTHO05D008332 2.1e-34 149.8 190 47.4
Phvul.003G142300 Phaseolus vulgaris HOM05D006970 ORTHO05D008332 2.1e-34 149.8 186 44.6
Medtr4g127530 Medicago truncatula HOM05D006970 ORTHO05D008332 2.7e-34 149.4 183 44.8
Gohir.A13G209000 Gossypium hirsutum HOM05D006970 ORTHO05D008332 1.8e-33 146.7 185 42.2
TPR.G5397 Trifolium pratense HOM05D006970 ORTHO05D008332 3.9e-33 145.6 179 44.7
Ciclev10009598m.g Citrus clementina HOM05D006970 ORTHO05D008332 6.7e-33 144.8 186 45.7
Lalb_Chr12g0199561 Lupinus albus HOM05D006970 ORTHO05D008332 6.7e-33 144.8 184 42.9
Gorai.013G243700 Gossypium raimondii HOM05D006970 ORTHO05D008332 1.5e-32 143.7 185 41.6
Gohir.D13G213400 Gossypium hirsutum HOM05D006970 ORTHO05D008332 3.3e-32 142.5 185 41.6
Gohir.A05G002800 Gossypium hirsutum HOM05D006970 ORTHO05D008332 9.6e-32 141.0 171 47.4
PGSC0003DMG400028750 Solanum tuberosum HOM05D006970 ORTHO05D008332 1.1e-30 137.5 174 45.4
Migut.L01891 Erythranthe guttata HOM05D006970 ORTHO05D008332 1.8e-30 136.7 192 42.2
Cpa.g.sc95.19 Carica papaya HOM05D006842 ORTHO05D008908 4.1e-30 135.6 192 43.8
Nitab4.5_0001335g0030 Nicotiana tabacum HOM05D006970 ORTHO05D008332 4.1e-30 135.6 186 43.5
Migut.O00829 Erythranthe guttata HOM05D006970 ORTHO05D008332 5.3e-30 135.2 193 42.0
Nitab4.5_0000007g0270 Nicotiana tabacum HOM05D006970 ORTHO05D008332 6.9e-30 134.8 185 43.8
Lj4g0006636 Lotus japonicus HOM05D006970 ORTHO05D008332 1.0e-28 131.0 187 43.3
COL.COLO4_34244 Corchorus olitorius HOM05D006970 ORTHO05D008332 5.0e-28 128.6 189 40.2
MBI13_g31534_MAGBIO Magnolia biondii HOM05D006970 ORTHO05D008332 6.5e-28 128.3 181 43.1
PGR142G3285 Punica granatum HOM05D006970 ORTHO05D008332 6.5e-28 128.3 180 43.9
Potri.006G076500 Populus trichocarpa HOM05D006970 ORTHO05D008332 1.9e-27 126.7 191 40.3
Sabra06G0057400 Salix brachista HOM05D006970 ORTHO05D008332 2.5e-27 126.3 191 41.4
Ciclev10010480m.g Citrus clementina HOM05D006970 ORTHO05D008332 4.2e-27 125.6 176 42.6
Potri.018G143700 Populus trichocarpa HOM05D006970 ORTHO05D008332 9.3e-27 124.4 189 39.7
CDE04G3128 Ceratophyllum demersum HOM05D006970 ORTHO05D008332 2.1e-26 123.2 182 40.1
Sabra18G0117100 Salix brachista HOM05D006970 ORTHO05D008332 3.0e-25 119.4 185 39.5
CDE02G0129 Ceratophyllum demersum HOM05D006970 ORTHO05D008332 1.3e-23 114.0 182 39.0
TPR.G30780 Trifolium pratense HOM05D006970 ORTHO05D008332 8.2e-23 111.3 130 48.5
Ciclev10009783m.g Citrus clementina HOM05D006970 ORTHO05D008332 3.1e-22 109.4 176 39.2
SalBow5G5711 Salvia bowleyana HOM05D006970 ORTHO05D008332 4.1e-22 109.0 167 38.9
Aqoxy7G02762 Aquilegia oxysepala HOM05D006970 ORTHO05D008332 9.0e-22 107.8 172 37.8
Lsat_1_v5_gn_8_69441 Lactuca sativa HOM05D006970 ORTHO05D008332 2.6e-21 106.3 176 42.0
Sopen07g004850 Solanum pennellii HOM05D006970 ORTHO05D008332 4.5e-21 105.5 127 48.0
ClCG11G011830 Citrullus lanatus HOM05D006970 ORTHO05D008332 1.7e-20 103.6 175 36.6
Os06g0700300 Oryza sativa ssp. japonica HOM05D006970 ORTHO05D008332 2.2e-20 103.2 185 35.7
HPP92_017386 Vanilla planifolia HOM05D006970 ORTHO05D008332 2.2e-20 103.2 181 35.9
ATR0626G126 Amborella trichopoda HOM05D006970 ORTHO05D008332 2.9e-20 102.8 167 39.5
SGA_v2.0_scaffold46G17371 Striga asiatica HOM05D006970 ORTHO05D008332 6.5e-20 101.7 174 38.5
HPP92_017115 Vanilla planifolia HOM05D006970 ORTHO05D008332 6.5e-20 101.7 179 33.0
Ciclev10009750m.g Citrus clementina HOM05D006970 ORTHO05D008332 1.4e-19 100.5 168 38.7
MELO3C003983.2 Cucumis melo HOM05D006970 ORTHO05D008332 1.9e-19 100.1 186 34.4
Sed0023812 Sechium edule HOM05D006970 ORTHO05D008332 1.9e-19 100.1 182 34.1
HPP92_017039 Vanilla planifolia HOM05D006970 ORTHO05D008332 2.5e-19 99.8 174 33.3
Sed0005019 Sechium edule HOM05D006970 ORTHO05D008332 3.2e-19 99.4 193 35.2
ECA236G3316 Erigeron canadensis HOM05D006970 ORTHO05D008332 5.5e-19 98.6 155 38.1
Ciclev10027216m.g Citrus clementina HOM05D006970 ORTHO05D008332 2.1e-18 96.7 151 42.4
CsaV3_2G008660 Cucumis sativus L. HOM05D006970 ORTHO05D008332 2.7e-18 96.3 157 35.7
Nitab4.5_0002365g0030 Nicotiana tabacum HOM05D006970 ORTHO05D008332 1.0e-17 94.4 80 61.2
Nitab4.5_0000366g0130 Nicotiana tabacum HOM05D006970 ORTHO05D008332 8.8e-17 91.3 126 46.0
DCAR_019800 Daucus carota HOM05D006970 ORTHO05D008332 1.3e-15 87.4 104 42.3
DCAR_019820 Daucus carota HOM05D000178 ORTHO05D001582 3.7e-15 85.9 168 33.9
Zm00001eb226840 Zea mays HOM05D006970 ORTHO05D008332 1.4e-14 84.0 131 38.2
HanXRQChr05g0140891 Helianthus annuus HOM05D006970 ORTHO05D008332 1.5e-13 80.5 174 31.6
ECA240G2451 Erigeron canadensis HOM05D006970 ORTHO05D008332 4.5e-13 79.0 104 38.5
Nitab4.5_0002365g0040 Nicotiana tabacum HOM05D006970 ORTHO05D008332 1.9e-11 73.6 76 51.3
SEGI_04656 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 8.8e-09 64.7 187 31.0
SEGI_32719 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 8.8e-09 64.7 184 29.9
ClCG02G012930 Citrullus lanatus HOM05D001022 ORTHO05D000825 1.1e-08 64.3 93 33.3
arahy.Tifrunner.gnm1.ann1.Q5WKNQ Arachis hypogaea HOM05D059560 ORTHO05D008332 1.3e-07 60.8 123 40.7
CsaV3_2G017020 Cucumis sativus L. HOM05D001022 ORTHO05D000825 3.7e-07 59.3 82 35.4
Cfa004241 Carpinus fangiana HOM05D001022 ORTHO05D000825 4.8e-07 58.9 88 36.4
Haze_15156 Corylus avellana HOM05D001022 ORTHO05D000825 6.3e-07 58.5 88 36.4
MELO3C020881.2 Cucumis melo HOM05D001022 ORTHO05D000825 6.3e-07 58.5 82 34.1
Glyma.18G057000 Glycine max HOM05D001767 ORTHO05D001714 2.4e-06 56.6 95 36.8
Lalb_Chr04g0251911 Lupinus albus HOM05D001767 ORTHO05D001714 3.1e-06 56.2 68 42.6
AUR62003227 Chenopodium quinoa HOM05D001022 ORTHO05D000825 4.1e-06 55.8 103 27.2
HanXRQChr09g0252031 Helianthus annuus HOM05D001767 ORTHO05D001714 5.3e-06 55.5 162 30.9
MD03G1057000 Malus domestica HOM05D001767 ORTHO05D001714 5.3e-06 55.5 155 28.4
Oeu050020.1 Olea europaea HOM05D001767 ORTHO05D001714 5.3e-06 55.5 95 36.8
Cfa021517 Carpinus fangiana HOM05D001022 ORTHO05D000825 7.0e-06 55.1 92 30.4
Prupe.6G047800 Prunus persica HOM05D001767 ORTHO05D001714 7.0e-06 55.1 155 29.0
CANSAT54G2108 Cannabis sativa HOM05D001767 ORTHO05D001714 9.1e-06 54.7 69 43.5
AUR62027247 Chenopodium quinoa HOM05D001022 ORTHO05D000825 9.1e-06 54.7 101 26.7
PSO675G0748 Papaver somniferum HOM05D001022 ORTHO05D000825 9.1e-06 54.7 108 28.7
QL06p044388 Quercus lobata HOM05D001022 ORTHO05D000825 9.1e-06 54.7 100 30.0
SGA_v2.0_scaffold220G42602 Striga asiatica HOM05D001022 ORTHO05D000825 9.1e-06 54.7 136 33.1


User provided reference genes

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