Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 7.3e-132 473.8 220 100.0
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 3.6e-62 242.3 141 80.1
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 1.4e-58 230.3 150 71.3
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 5.9e-57 224.9 138 74.6
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 6.5e-56 221.5 138 73.9
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 1.1e-55 220.7 140 71.4
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.5e-55 219.5 138 73.2
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 3.2e-55 219.2 140 72.1
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 7.2e-55 218.0 114 86.0
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 9.4e-55 217.6 140 71.4
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 9.4e-55 217.6 140 71.4
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 9.4e-55 217.6 114 85.1
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 2.1e-54 216.5 140 71.4
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 2.1e-54 216.5 118 81.4
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 2.1e-54 216.5 116 81.9
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 4.7e-54 215.3 140 70.0
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 1.8e-53 213.4 116 81.9
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 2.3e-53 213.0 106 89.6
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 2.3e-53 213.0 140 70.7
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 2.3e-53 213.0 140 67.9
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 3.0e-53 212.6 114 83.3
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 3.0e-53 212.6 140 70.0
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 5.2e-53 211.8 140 69.3
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 5.2e-53 211.8 108 84.3
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 8.8e-53 211.1 140 70.0
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 1.1e-52 210.7 140 68.6
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.1e-52 210.7 140 67.9
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 1.5e-52 210.3 116 77.6
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 1.5e-52 210.3 141 67.4
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.0e-52 209.9 122 77.0
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.6e-52 209.5 116 77.6
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 2.6e-52 209.5 114 80.7
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 2.6e-52 209.5 116 81.0
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 3.3e-52 209.1 143 67.1
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 3.3e-52 209.1 143 67.1
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 3.3e-52 209.1 116 80.2
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 4.4e-52 208.8 114 82.5
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 5.7e-52 208.4 116 76.7
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 5.7e-52 208.4 114 81.6
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 5.7e-52 208.4 111 84.7
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 5.7e-52 208.4 111 84.7
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 5.7e-52 208.4 111 84.7
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 5.7e-52 208.4 111 84.7
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 7.4e-52 208.0 116 76.7
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 7.4e-52 208.0 139 68.3
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 7.4e-52 208.0 116 80.2
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 7.4e-52 208.0 146 63.7
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 9.7e-52 207.6 116 77.6
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 9.7e-52 207.6 140 67.9
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 9.7e-52 207.6 139 68.3
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 9.7e-52 207.6 139 68.3
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 1.3e-51 207.2 141 66.0
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 1.3e-51 207.2 141 65.2
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 1.7e-51 206.8 138 69.6
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 1.7e-51 206.8 140 65.0
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 2.8e-51 206.1 116 77.6
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 3.7e-51 205.7 116 81.0
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 3.7e-51 205.7 140 65.0
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 4.8e-51 205.3 119 75.6
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 4.8e-51 205.3 140 65.7
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 4.8e-51 205.3 140 65.0
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 4.8e-51 205.3 138 68.1
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 6.3e-51 204.9 140 65.7
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 6.3e-51 204.9 140 65.0
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 8.2e-51 204.5 140 65.0
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 8.2e-51 204.5 135 68.9
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 1.1e-50 204.1 116 75.0
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.1e-50 204.1 159 61.0
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 1.1e-50 204.1 140 68.6
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 1.4e-50 203.8 140 64.3
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 1.4e-50 203.8 138 67.4
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.4e-50 203.8 140 67.1
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.8e-50 203.4 130 71.5
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 2.4e-50 203.0 140 64.3
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 4.1e-50 202.2 138 67.4
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 4.1e-50 202.2 114 74.6
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 4.1e-50 202.2 116 75.9
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 4.1e-50 202.2 113 78.8
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 5.3e-50 201.8 140 64.3
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 7.0e-50 201.4 116 76.7
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 1.2e-49 200.7 114 77.2
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.6e-49 200.3 114 74.6
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 1.6e-49 200.3 114 76.3
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 2.0e-49 199.9 124 75.0
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.6e-49 199.5 116 75.0
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 3.5e-49 199.1 141 65.2
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 5.9e-49 198.4 116 75.0
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 5.9e-49 198.4 149 61.7
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.0e-48 197.6 116 76.7
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 1.3e-48 197.2 147 63.9
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 1.3e-48 197.2 114 77.2
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.3e-48 197.2 103 86.4
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 1.7e-48 196.8 141 63.8
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 2.2e-48 196.4 148 61.5
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 2.2e-48 196.4 104 79.8
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.9e-48 196.1 114 76.3
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 8.5e-48 194.5 116 73.3
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.1e-47 194.1 114 72.8
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 1.1e-47 194.1 114 75.4
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 1.9e-47 193.4 140 62.9
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 9.4e-47 191.0 116 71.6
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 2.7e-46 189.5 136 64.7
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 3.6e-46 189.1 140 67.9
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 6.1e-46 188.3 106 76.4
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 3.0e-45 186.0 93 88.2
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 4.0e-45 185.7 95 85.3
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 1.5e-44 183.7 96 82.3
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 3.1e-42 176.0 114 64.9
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 7.0e-42 174.9 96 80.2
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 1.2e-41 174.1 140 60.0
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.6e-41 173.7 164 53.7
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 2.7e-41 172.9 97 78.4
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 7.7e-41 171.4 102 71.6
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.0e-40 171.0 95 78.9
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 9.4e-39 164.5 104 73.1
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 9.8e-36 154.5 102 62.7
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 4.1e-34 149.1 102 60.8
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 5.4e-34 148.7 85 77.6
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 7.0e-34 148.3 126 61.1
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 2.0e-33 146.7 106 56.6
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 2.3e-29 133.3 85 74.1
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 2.2e-27 126.7 67 83.6
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 8.3e-27 124.8 123 52.0
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 4.5e-25 119.0 140 45.0
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 8.6e-24 114.8 114 51.8
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 6.1e-22 108.6 87 57.5
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 1.3e-08 64.3 33 75.8


User provided reference genes

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