Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 2.3e-73 278.9 147 100.0
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 4.3e-64 248.1 147 86.4
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 1.3e-63 246.5 147 85.7
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 3.6e-50 201.8 147 73.5
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 6.3e-47 191.0 147 70.7
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 1.3e-44 183.3 147 66.7
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 3.6e-42 175.3 147 64.6
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 1.1e-40 170.2 147 63.3
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 2.6e-40 169.1 142 65.5
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 5.7e-40 167.9 144 64.6
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 6.3e-39 164.5 147 60.5
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 4.1e-38 161.8 135 63.0
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 1.6e-37 159.8 145 60.0
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 1.6e-37 159.8 140 58.6
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 1.0e-36 157.1 146 58.9
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 1.3e-36 156.8 147 57.8
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 2.2e-36 156.0 147 56.5
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 1.5e-35 153.3 144 56.9
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 1.9e-35 152.9 140 55.7
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 1.9e-35 152.9 145 54.5
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 2.5e-35 152.5 145 58.6
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 3.2e-35 152.1 145 55.2
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 4.2e-35 151.8 147 58.5
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 7.2e-35 151.0 140 58.6
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 9.4e-35 150.6 147 55.1
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 4.7e-34 148.3 140 57.1
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 4.7e-34 148.3 147 55.8
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 8.0e-34 147.5 139 56.1
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 8.0e-34 147.5 139 56.1
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 8.0e-34 147.5 147 57.8
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 8.0e-34 147.5 146 54.8
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 8.0e-34 147.5 145 55.2
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 3.0e-33 145.6 143 53.1
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 3.0e-33 145.6 145 56.6
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 3.0e-33 145.6 137 57.7
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 3.0e-33 145.6 147 57.1
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 3.0e-33 145.6 122 59.8
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 6.7e-33 144.4 149 57.7
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 6.7e-33 144.4 143 56.6
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 1.2e-32 143.7 143 52.4
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 1.2e-32 143.7 147 52.4
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 1.2e-32 143.7 146 53.4
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 1.2e-32 143.7 139 56.8
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 1.2e-32 143.7 144 54.2
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 1.5e-32 143.3 145 54.5
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 1.5e-32 143.3 145 55.2
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 2.6e-32 142.5 147 56.5
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 2.6e-32 142.5 147 51.7
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 2.6e-32 142.5 147 53.7
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 3.3e-32 142.1 146 52.7
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 3.3e-32 142.1 147 54.4
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 4.4e-32 141.7 143 53.1
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 9.7e-32 140.6 143 52.4
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 2.2e-31 139.4 143 51.7
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 2.2e-31 139.4 140 53.6
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 2.8e-31 139.0 143 51.0
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 2.8e-31 139.0 136 56.6
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 4.8e-31 138.3 149 56.4
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 8.2e-31 137.5 143 51.0
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 8.2e-31 137.5 143 51.0
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 8.2e-31 137.5 143 51.0
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 1.4e-30 136.7 124 57.3
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 1.4e-30 136.7 173 47.4
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 7.0e-30 134.4 147 51.0
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 2.0e-29 132.9 139 53.2
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 2.0e-29 132.9 143 49.7
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 3.5e-29 132.1 145 51.0
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 7.7e-29 131.0 126 55.6
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 3.8e-28 128.6 180 45.6
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 1.9e-27 126.3 145 49.7
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 2.7e-26 122.5 119 52.1
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 6.1e-26 121.3 148 48.6
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 8.0e-26 120.9 143 50.3
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 1.0e-25 120.6 124 53.2
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 1.0e-25 120.6 147 52.4
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 1.4e-25 120.2 124 53.2
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 2.6e-24 115.9 139 48.2
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 4.4e-24 115.2 149 44.3
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 3.7e-23 112.1 147 46.3
Actinidia07550 Actinidia chinensis HOM05D007474 ORTHO05D009367 4.1e-22 108.6 75 70.7
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 9.1e-22 107.5 136 48.5
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 1.2e-21 107.1 145 45.5
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.3e-20 103.6 147 46.3
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 1.7e-20 103.2 117 46.2
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 8.6e-20 100.9 147 45.6
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 8.6e-20 100.9 97 57.7
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 6.1e-18 94.7 147 40.8
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 8.0e-18 94.4 137 46.0
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.8e-15 85.9 140 42.9
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 3.7e-15 85.5 98 50.0
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 2.7e-13 79.3 98 44.9
arahy.Tifrunner.gnm1.ann1.245C1J Arachis hypogaea HOM05D007474 ORTHO05D009367 5.8e-08 61.6 66 42.4
arahy.Tifrunner.gnm1.ann1.TVY351 Arachis hypogaea HOM05D007474 ORTHO05D009367 6.4e-07 58.2 61 44.3
Mapoly0011s0196 Marchantia polymorpha HOM05D007474 ORTHO05D009367 1.9e-06 56.6 139 32.4


User provided reference genes

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