Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 3.5e-89 331.6 175 100.0
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 1.3e-78 296.6 179 89.4
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 5.3e-69 264.6 176 77.8
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.5e-68 263.1 177 75.7
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 3.5e-68 261.9 175 77.1
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 3.5e-68 261.9 173 74.0
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 5.9e-68 261.2 178 75.8
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 1.0e-67 260.4 175 76.6
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 1.0e-67 260.4 175 77.1
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 1.3e-67 260.0 177 74.6
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 1.7e-67 259.6 172 75.6
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 1.7e-67 259.6 175 77.1
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 5.0e-67 258.1 175 74.9
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 5.0e-67 258.1 175 73.1
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 5.0e-67 258.1 178 75.3
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 8.5e-67 257.3 173 75.1
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 8.5e-67 257.3 177 75.7
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 8.5e-67 257.3 176 73.9
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 1.1e-66 256.9 175 74.9
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 1.1e-66 256.9 175 74.9
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 1.1e-66 256.9 175 73.7
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 1.1e-66 256.9 179 75.4
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 1.1e-66 256.9 179 75.4
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 1.5e-66 256.5 175 74.3
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 1.5e-66 256.5 175 73.7
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 1.5e-66 256.5 175 73.7
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 1.5e-66 256.5 178 73.6
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 1.5e-66 256.5 175 76.6
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 1.5e-66 256.5 179 76.0
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 1.9e-66 256.1 178 73.0
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 1.9e-66 256.1 175 75.4
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.9e-66 256.1 178 74.2
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 3.2e-66 255.4 176 75.0
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 3.2e-66 255.4 180 76.1
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 3.2e-66 255.4 177 72.9
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 4.2e-66 255.0 175 72.6
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 5.5e-66 254.6 177 72.3
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 5.5e-66 254.6 156 82.1
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 7.2e-66 254.2 173 75.1
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 9.4e-66 253.8 175 72.6
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 9.4e-66 253.8 177 72.3
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 9.4e-66 253.8 178 74.2
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 9.4e-66 253.8 165 75.8
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 9.4e-66 253.8 179 74.3
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 1.2e-65 253.4 180 71.7
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 1.2e-65 253.4 180 71.7
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 1.2e-65 253.4 180 71.7
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 1.6e-65 253.1 168 77.4
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 1.6e-65 253.1 175 72.6
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.6e-65 253.1 180 74.4
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 1.6e-65 253.1 178 73.6
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 2.1e-65 252.7 175 73.7
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 2.7e-65 252.3 175 76.0
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 3.6e-65 251.9 177 72.3
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 3.6e-65 251.9 177 71.8
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 3.6e-65 251.9 178 74.2
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.7e-65 251.5 175 73.1
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 8.0e-65 250.8 176 73.3
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 8.0e-65 250.8 176 73.3
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 8.0e-65 250.8 176 72.7
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 8.0e-65 250.8 175 73.1
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 8.0e-65 250.8 176 72.2
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 8.0e-65 250.8 174 74.1
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.4e-64 250.0 177 72.3
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.4e-64 250.0 176 73.3
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.4e-64 250.0 176 73.9
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.4e-64 250.0 176 73.9
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 1.8e-64 249.6 175 72.0
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 1.8e-64 249.6 175 70.9
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.8e-64 249.6 173 73.4
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.3e-64 249.2 177 71.8
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.3e-64 249.2 176 73.9
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 3.0e-64 248.8 177 70.1
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 3.0e-64 248.8 175 71.4
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 5.2e-64 248.1 179 72.6
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 6.7e-64 247.7 155 76.1
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 8.8e-64 247.3 156 80.1
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.1e-63 246.9 177 69.5
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 1.1e-63 246.9 178 70.8
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 1.5e-63 246.5 156 79.5
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 2.0e-63 246.1 179 72.1
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 2.0e-63 246.1 176 72.2
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 2.6e-63 245.7 153 77.8
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 3.3e-63 245.4 164 75.6
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 7.4e-63 244.2 167 73.7
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 7.4e-63 244.2 153 77.1
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 1.3e-62 243.4 175 70.9
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 1.7e-62 243.0 153 79.7
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 3.7e-62 241.9 165 74.5
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 1.4e-61 240.0 169 74.0
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 3.1e-61 238.8 151 76.2
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 4.1e-61 238.4 156 77.6
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 5.3e-61 238.0 153 77.8
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 5.3e-61 238.0 151 78.1
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.2e-60 236.9 167 71.3
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.0e-60 236.1 147 79.6
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 2.2e-59 232.6 176 69.3
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 2.9e-59 232.3 162 73.5
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 2.9e-59 232.3 176 69.3
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 6.5e-59 231.1 153 72.5
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 1.5e-58 229.9 159 69.8
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 3.2e-58 228.8 161 70.2
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 2.0e-55 219.5 161 68.9
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 9.8e-55 217.2 155 71.6
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.7e-54 216.5 154 69.5
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 2.2e-54 216.1 137 75.2
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 7.0e-53 211.1 152 71.7
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 3.5e-52 208.8 167 64.7
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 5.0e-51 204.9 131 76.3
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 2.5e-50 202.6 153 64.7
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 8.0e-49 197.6 150 67.3
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 1.0e-48 197.2 154 65.6
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 8.8e-48 194.1 155 64.5
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 1.2e-47 193.7 118 78.8
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 3.4e-47 192.2 117 80.3
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 8.3e-46 187.6 120 78.3
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.4e-45 186.8 120 80.0
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 9.1e-45 184.1 107 83.2
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 2.3e-43 179.5 107 80.4
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 3.8e-43 178.7 152 58.6
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 1.5e-42 176.8 131 66.4
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 1.9e-42 176.4 107 80.4
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 6.8e-40 167.9 129 68.2
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 2.8e-33 146.0 91 78.0
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 9.2e-29 131.0 123 48.8
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 6.4e-14 81.6 106 47.2
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 6.8e-08 61.6 117 38.5


User provided reference genes

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