Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 1.1e-223 779.6 404 100.0
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 1.1e-133 480.7 356 71.6
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.3e-131 473.0 405 64.9
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 6.9e-128 461.5 397 64.0
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 4.8e-113 412.1 405 59.5
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 1.1e-109 401.0 406 58.1
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 1.4e-104 384.0 409 55.5
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 8.2e-97 358.2 406 52.7
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 1.4e-96 357.5 398 52.0
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 6.9e-96 355.1 408 52.7
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 1.2e-95 354.4 406 52.7
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 3.4e-95 352.8 408 51.5
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 3.9e-91 339.3 408 51.7
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 6.7e-91 338.6 396 51.0
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 8.8e-91 338.2 399 50.6
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 3.3e-90 336.3 406 49.8
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 1.1e-88 331.3 404 50.0
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 2.6e-87 326.6 396 48.7
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 4.5e-87 325.9 391 49.1
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 5.0e-86 322.4 403 49.4
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 1.6e-84 317.4 395 46.8
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 2.7e-84 316.6 398 48.0
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 1.4e-83 314.3 396 46.7
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 1.5e-82 310.8 396 48.2
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 2.0e-82 310.5 391 47.8
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 9.7e-82 308.1 408 46.3
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 9.7e-82 308.1 378 48.7
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 1.7e-81 307.4 412 47.1
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 2.2e-81 307.0 400 49.2
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 3.7e-81 306.2 405 46.9
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 4.8e-81 305.8 395 46.1
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 6.3e-81 305.4 396 46.2
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 8.2e-81 305.1 395 46.1
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.8e-80 303.9 395 47.3
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 5.3e-80 302.4 396 47.2
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 6.9e-80 302.0 392 47.4
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 6.9e-80 302.0 396 46.2
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 3.4e-79 299.7 228 71.1
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 5.9e-79 298.9 395 46.8
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 1.3e-78 297.7 392 47.2
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 1.7e-78 297.4 392 46.9
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 1.1e-77 294.7 408 47.1
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.4e-77 294.3 392 46.7
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 2.7e-76 290.0 409 46.7
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 1.4e-75 287.7 392 46.2
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 1.8e-75 287.3 408 45.6
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 3.3e-74 283.1 389 45.8
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 6.3e-73 278.9 392 45.4
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 4.1e-72 276.2 392 44.1
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 1.2e-71 274.6 396 46.7
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 1.6e-71 274.2 472 39.6
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 1.0e-70 271.6 381 44.1
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 2.2e-70 270.4 396 43.9
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 1.9e-69 267.3 413 44.1
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 2.5e-69 266.9 347 45.0
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 5.5e-69 265.8 346 44.2
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 5.5e-69 265.8 432 41.0
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 1.2e-68 264.6 391 42.7
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 2.7e-68 263.5 397 44.6
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 4.7e-68 262.7 393 43.3
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 3.0e-67 260.0 396 42.7
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 4.0e-67 259.6 402 43.8
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 5.2e-67 259.2 392 44.4
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 2.6e-66 256.9 397 43.6
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 1.3e-65 254.6 393 43.8
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 2.8e-65 253.4 390 44.9
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 2.8e-65 253.4 442 41.4
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 2.4e-64 250.4 399 41.4
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 1.6e-63 247.7 332 44.0
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 5.9e-63 245.7 394 42.6
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 3.8e-62 243.0 404 40.8
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 8.5e-62 241.9 412 40.8
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 5.5e-61 239.2 399 42.4
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 2.7e-60 236.9 406 39.7
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 3.6e-60 236.5 325 44.3
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 3.0e-59 233.4 378 42.3
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 8.8e-59 231.9 394 42.9
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 1.5e-58 231.1 394 41.1
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 1.5e-58 231.1 405 40.2
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 1.5e-58 231.1 394 42.4
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 2.0e-58 230.7 395 38.2
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 5.7e-58 229.2 397 41.8
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 9.8e-58 228.4 395 41.0
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 2.2e-57 227.3 395 41.3
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 4.8e-57 226.1 395 40.5
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 1.1e-56 224.9 395 40.8
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 1.1e-56 224.9 266 48.5
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 3.1e-56 223.4 398 41.2
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.2e-55 221.5 394 41.6
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 3.5e-55 219.9 394 40.9
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 1.0e-54 218.4 393 39.9
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 2.9e-54 216.9 393 40.5
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 1.1e-53 214.9 396 40.9
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 3.3e-53 213.4 387 37.2
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 1.6e-52 211.1 390 39.5
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 2.8e-52 210.3 395 39.0
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 8.0e-52 208.8 405 37.8
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 1.4e-51 208.0 215 53.0
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 3.0e-51 206.8 351 39.3
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 5.7e-50 202.6 359 38.2
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.3e-49 201.4 328 40.2
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 3.1e-48 196.8 403 35.7
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 1.0e-46 191.8 418 35.9
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 3.8e-46 189.9 383 37.9
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.5e-45 188.0 331 39.3
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 7.3e-45 185.7 349 38.1
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 4.7e-44 183.0 235 49.8
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 4.0e-43 179.9 402 33.6
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 5.8e-42 176.0 410 33.9
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 2.9e-41 173.7 238 45.4
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 3.7e-41 173.3 217 44.7
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 8.3e-41 172.2 365 35.6
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 4.1e-40 169.9 308 39.9
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 6.6e-38 162.5 261 42.1
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 3.1e-35 153.7 395 33.7
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 8.9e-35 152.1 216 43.1
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 8.9e-35 152.1 216 43.1
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 8.9e-35 152.1 216 43.1
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 8.9e-35 152.1 216 43.1
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 4.4e-34 149.8 173 48.0
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 3.2e-32 143.7 168 49.4
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 3.9e-30 136.7 206 41.7
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 2.5e-29 134.0 259 39.8
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 4.9e-25 119.8 346 29.5
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 3.5e-23 113.6 121 49.6
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 3.0e-22 110.5 159 43.4
unitig_578.g16398 Utricularia gibba HOM05D005675 ORTHO05D006884 3.1e-19 100.5 116 44.0
CSS0044900 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 6.4e-17 92.8 74 67.6
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 8.4e-17 92.4 458 23.6
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 1.4e-16 91.7 91 53.8
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 7.1e-16 89.4 438 24.0
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 4.6e-15 86.7 94 57.4
Gohir.D08G027550 Gossypium hirsutum HOM05D005675 ORTHO05D006884 9.6e-13 79.0 72 54.2
Gorai.004G024600 Gossypium raimondii HOM05D005675 ORTHO05D006884 5.3e-11 73.2 72 51.4
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 8.4e-09 65.9 255 26.7
Sopen00g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 1.1e-08 65.5 43 72.1
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 1.3e-06 58.5 249 22.1
Sabra18G0125400 Salix brachista HOM05D000311 ORTHO05D000183 5.1e-06 56.6 43 60.5
Ah.13g066730 Amaranthus hybridus HOM05D014553 ORTHO05D018255 6.6e-06 56.2 65 47.7


User provided reference genes

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