Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20749 Vaccinium macrocarpon HOM05D003771 ORTHO05D004396 3.1e-162 575.1 296 100.0
Rhsim01G0106700 Rhododendron simsii HOM05D003771 ORTHO05D004396 2.6e-108 396.0 252 82.9
CSS0004980 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 1.6e-97 360.1 253 77.9
CSS0043776 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 1.6e-97 360.1 253 77.9
GSVIVG01022289001 Vitis vinifera HOM05D003771 ORTHO05D004396 2.9e-91 339.3 254 72.8
Dinv12623 Davidia involucrata HOM05D003771 ORTHO05D004396 1.4e-90 337.0 253 71.9
ECA233G1083 Erigeron canadensis HOM05D003771 ORTHO05D004396 1.9e-87 326.6 253 70.0
Cc06_g23760 Coffea canephora HOM05D003771 ORTHO05D004396 2.4e-85 319.7 252 69.8
CAN.G587.52 Capsicum annuum HOM05D003771 ORTHO05D004396 3.1e-85 319.3 252 67.9
HanXRQChr02g0040541 Helianthus annuus HOM05D003771 ORTHO05D004396 3.1e-85 319.3 253 68.8
Nitab4.5_0000019g0010 Nicotiana tabacum HOM05D003771 ORTHO05D004396 5.3e-85 318.5 253 68.4
Atru.chr12.1314 Acer truncatum HOM05D003771 ORTHO05D004396 9.0e-85 317.8 254 68.1
Peaxi162Scf00322g01517 Petunia axillaris HOM05D003771 ORTHO05D004396 9.0e-85 317.8 252 68.3
Prupe.7G042600 Prunus persica HOM05D003771 ORTHO05D004396 1.7e-83 313.5 253 67.6
Eucgr.E04317 Eucalyptus grandis HOM05D003771 ORTHO05D004396 6.4e-83 311.6 253 68.4
Gohir.D05G000400 Gossypium hirsutum HOM05D003771 ORTHO05D004396 1.1e-82 310.8 288 61.1
Gorai.009G000200 Gossypium raimondii HOM05D003771 ORTHO05D004396 1.1e-82 310.8 288 61.1
Cpa.g.sc91.64 Carica papaya HOM05D003771 ORTHO05D004396 4.2e-82 308.9 253 67.6
COL.COLO4_37655 Corchorus olitorius HOM05D003771 ORTHO05D004396 9.3e-82 307.8 282 62.4
MD15G1427900 Malus domestica HOM05D003771 ORTHO05D004396 7.9e-81 304.7 253 66.8
QL11p007303 Quercus lobata HOM05D003771 ORTHO05D004396 1.0e-80 304.3 252 66.3
RcHm_v2.0_Chr4g0384941 Rosa chinensis HOM05D003771 ORTHO05D004396 1.3e-80 303.9 253 66.0
Duzib168G1435 Durio zibethinus HOM05D003771 ORTHO05D004396 3.0e-80 302.8 289 60.6
MD04G1002300 Malus domestica HOM05D003771 ORTHO05D004396 3.0e-80 302.8 253 66.4
Sed0018603 Sechium edule HOM05D003771 ORTHO05D004396 3.0e-80 302.8 251 67.3
TAR383G0820 Trochodendron aralioides HOM05D003771 ORTHO05D004396 3.0e-80 302.8 256 65.2
MELO3C009070.2 Cucumis melo HOM05D003771 ORTHO05D004396 5.1e-80 302.0 253 67.6
DCAR_020453 Daucus carota HOM05D003771 ORTHO05D004396 5.1e-80 302.0 253 68.4
Thecc.09G205400 Theobroma cacao HOM05D003771 ORTHO05D004396 5.1e-80 302.0 289 60.2
ClCG04G000570 Citrullus lanatus HOM05D003771 ORTHO05D004396 6.7e-80 301.6 253 67.2
CsaV3_4G031470 Cucumis sativus L. HOM05D003771 ORTHO05D004396 6.7e-80 301.6 253 67.6
VMungo0251G3699 Vigna mungo HOM05D003771 ORTHO05D004396 8.7e-80 301.2 253 66.8
FAN22G1465 Fragaria x ananassa HOM05D003771 ORTHO05D004396 1.9e-79 300.1 253 66.4
FvH4_4g00210 Fragaria vesca HOM05D003771 ORTHO05D004396 2.5e-79 299.7 253 66.4
FAN17G2138 Fragaria x ananassa HOM05D003771 ORTHO05D004396 3.3e-79 299.3 253 66.4
Phvul.002G302000 Phaseolus vulgaris HOM05D003771 ORTHO05D004396 3.3e-79 299.3 253 66.8
TWI34G0561 Tripterygium wilfordii HOM05D003771 ORTHO05D004396 5.6e-79 298.5 255 65.5
Actinidia02465 Actinidia chinensis HOM05D003771 ORTHO05D004396 7.4e-79 298.1 227 72.2
Lj4g0002190 Lotus japonicus HOM05D003771 ORTHO05D004396 7.4e-79 298.1 253 65.6
arahy.Tifrunner.gnm1.ann1.TH49EC Arachis hypogaea HOM05D003771 ORTHO05D004396 9.6e-79 297.7 253 66.4
CANSAT64G2070 Cannabis sativa HOM05D003771 ORTHO05D004396 1.3e-78 297.4 253 65.6
FAN12G3555 Fragaria x ananassa HOM05D003771 ORTHO05D004396 1.3e-78 297.4 253 66.0
Psat7g020760 Pisum sativum HOM05D003771 ORTHO05D004396 1.3e-78 297.4 253 65.6
PGR044G2258 Punica granatum HOM05D003771 ORTHO05D004396 2.1e-78 296.6 253 66.8
arahy.Tifrunner.gnm1.ann1.XKPK2Z Arachis hypogaea HOM05D003771 ORTHO05D004396 3.6e-78 295.8 253 66.0
CiPaw.15G162500 Carya illinoinensis HOM05D003771 ORTHO05D004396 3.6e-78 295.8 253 64.8
Lalb_Chr05g0223831 Lupinus albus HOM05D003771 ORTHO05D004396 4.8e-78 295.4 253 65.2
Medtr8g100105 Medicago truncatula HOM05D003771 ORTHO05D004396 4.8e-78 295.4 253 64.8
Sopen05g020060 Solanum pennellii HOM05D003771 ORTHO05D004396 8.1e-78 294.7 253 65.2
Ca_17443_v3 Cicer arietinum L. HOM05D003771 ORTHO05D004396 1.8e-77 293.5 253 65.6
MSTRG.26513 Avicennia marina HOM05D003771 ORTHO05D004396 3.1e-77 292.7 253 65.6
Aqoxy3G04250 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 5.3e-77 292.0 256 64.8
Manes.02G223900 Manihot esculenta HOM05D003771 ORTHO05D004396 9.0e-77 291.2 253 64.4
Potri.018G149400 Populus trichocarpa HOM05D003771 ORTHO05D004396 2.6e-76 289.7 253 65.6
Nitab4.5_0006114g0010 Nicotiana tabacum HOM05D003771 ORTHO05D004396 4.5e-76 288.9 294 58.2
Sabra18G0126200 Salix brachista HOM05D003771 ORTHO05D004396 4.5e-76 288.9 253 65.6
Nn3g19428 Nelumbo nucifera HOM05D003771 ORTHO05D004396 5.8e-76 288.5 256 63.3
Glyma.08G026700 Glycine max HOM05D003771 ORTHO05D004396 3.8e-75 285.8 253 63.2
Lsat_1_v5_gn_1_6680 Lactuca sativa HOM05D003771 ORTHO05D004396 8.4e-75 284.6 254 64.6
Migut.L01925 Erythranthe guttata HOM05D003771 ORTHO05D004396 4.2e-74 282.3 258 64.3
Glyma.05G220300 Glycine max HOM05D003771 ORTHO05D004396 4.2e-74 282.3 254 63.4
PSO063G0153 Papaver somniferum HOM05D003771 ORTHO05D004396 7.1e-74 281.6 257 63.4
Ciclev10007279m.g Citrus clementina HOM05D003771 ORTHO05D004396 1.6e-73 280.4 253 62.8
Hund03218 Selenicereus undatus HOM05D003771 ORTHO05D004396 4.6e-73 278.9 253 62.5
AUR62034148 Chenopodium quinoa HOM05D003771 ORTHO05D004396 3.0e-72 276.2 253 62.5
SGA_v2.0_scaffold21G09599 Striga asiatica HOM05D003771 ORTHO05D004396 3.0e-72 276.2 247 63.2
Haze_19082 Corylus avellana HOM05D003771 ORTHO05D004396 5.1e-72 275.4 277 57.4
PSO782G3876 Papaver somniferum HOM05D003771 ORTHO05D004396 5.1e-72 275.4 257 62.3
EL10Ac4g08749 Beta vulgaris HOM05D003771 ORTHO05D004396 1.1e-71 274.2 253 63.2
CDE07G0913 Ceratophyllum demersum HOM05D003771 ORTHO05D004396 1.9e-71 273.5 256 60.9
SalBow5G2520 Salvia bowleyana HOM05D003771 ORTHO05D004396 3.3e-71 272.7 278 58.6
HPP92_018040 Vanilla planifolia HOM05D003771 ORTHO05D004396 5.6e-71 271.9 255 62.0
Nn1g00173 Nelumbo nucifera HOM05D003771 ORTHO05D004396 9.6e-71 271.2 257 61.9
Gohir.A05G000200 Gossypium hirsutum HOM05D003771 ORTHO05D004396 3.1e-69 266.2 266 57.9
AT2G07360 Arabidopsis thaliana HOM05D003771 ORTHO05D004396 1.5e-68 263.8 254 60.2
AL3G44140 Arabidopsis lyrata HOM05D003771 ORTHO05D004396 5.8e-68 261.9 254 59.8
BcaB08g35516 Brassica carinata HOM05D003771 ORTHO05D004396 5.8e-68 261.9 254 59.8
CARHR104050 Cardamine hirsuta HOM05D003771 ORTHO05D004396 1.7e-67 260.4 256 59.8
Thhalv10012482m.g Eutrema salsugineum HOM05D003771 ORTHO05D004396 1.7e-67 260.4 254 59.4
Carub.0013s0005 Capsella rubella HOM05D003771 ORTHO05D004396 2.9e-67 259.6 254 59.4
Sp6g13880 Schrenkiella parvula HOM05D003771 ORTHO05D004396 2.9e-67 259.6 254 59.4
Aa31sc328G10 Aethionema arabicum HOM05D003771 ORTHO05D004396 2.5e-66 256.5 253 58.9
BcaC01g06134 Brassica carinata HOM05D003771 ORTHO05D004396 2.5e-66 256.5 255 60.0
C03p18900 Brassica napus HOM05D003771 ORTHO05D004396 2.5e-66 256.5 255 60.0
BolC3t14282H Brassica oleracea HOM05D003771 ORTHO05D004396 2.5e-66 256.5 255 60.0
AUR62014286 Chenopodium quinoa HOM05D003771 ORTHO05D004396 3.2e-66 256.1 253 60.1
unitig_899.g15422 Utricularia gibba HOM05D003771 ORTHO05D004396 1.2e-65 254.2 253 59.7
A10p09550 Brassica napus HOM05D003771 ORTHO05D004396 1.6e-65 253.8 254 59.4
A03p16060 Brassica napus HOM05D003771 ORTHO05D004396 2.1e-65 253.4 255 59.2
BraA03t10897Z Brassica rapa HOM05D003771 ORTHO05D004396 2.1e-65 253.4 255 59.2
BcaB01g04159 Brassica carinata HOM05D003771 ORTHO05D004396 4.6e-65 252.3 255 59.6
BcaC04g20648 Brassica carinata HOM05D003771 ORTHO05D004396 7.9e-65 251.5 254 59.1
Zm00001eb011800 Zea mays HOM05D003771 ORTHO05D004396 1.3e-64 250.8 250 58.0
C09p41070 Brassica napus HOM05D003771 ORTHO05D004396 2.3e-64 250.0 254 58.7
Os03g0265700 Oryza sativa ssp. japonica HOM05D003771 ORTHO05D004396 3.9e-64 249.2 250 58.0
Lj5A798G49 Lonicera japonica HOM05D003771 ORTHO05D004396 8.7e-64 248.1 253 60.1
ATR0626G390 Amborella trichopoda HOM05D003771 ORTHO05D004396 2.1e-62 243.4 253 55.3
SEGI_40037 Sequoiadendron giganteum HOM05D003771 ORTHO05D004396 1.2e-60 237.7 257 55.6
Ah.04g162600 Amaranthus hybridus HOM05D003771 ORTHO05D004396 5.9e-60 235.3 228 60.5
THA.LOC104808936 Tarenaya hassleriana HOM05D003771 ORTHO05D004396 3.2e-58 229.6 258 55.0
MD07G1055200 Malus domestica HOM05D003771 ORTHO05D004396 4.2e-58 229.2 223 57.8
TPR.G14800 Trifolium pratense HOM05D003771 ORTHO05D004396 3.6e-57 226.1 178 69.7
RcHm_v2.0_Chr4g0384831 Rosa chinensis HOM05D003771 ORTHO05D004396 6.3e-54 215.3 230 57.8
Hund19352 Selenicereus undatus HOM05D003771 ORTHO05D004396 2.9e-51 206.5 284 49.3
Lsat_1_v5_gn_8_69981 Lactuca sativa HOM05D003771 ORTHO05D004396 3.6e-49 199.5 271 48.0
Rhsim01G0108400 Rhododendron simsii HOM05D000041 ORTHO05D000452 2.0e-44 183.7 154 66.9
Oeu036957.1 Olea europaea HOM05D003771 ORTHO05D004396 1.8e-40 170.6 139 64.0
SMO367G0435 Selaginella moellendorffii HOM05D003771 ORTHO05D004396 5.7e-39 165.6 248 42.7
Oeu008632.1 Olea europaea HOM05D003771 ORTHO05D004396 3.6e-33 146.4 117 71.8
Lju50C19G3 Lonicera japonica HOM05D003771 ORTHO05D004396 5.7e-31 139.0 94 81.9
Aqoxy3G02691 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 2.8e-30 136.7 89 79.8
Peaxi162Scf00322g01518 Petunia axillaris HOM05D003771 ORTHO05D004396 3.7e-30 136.3 158 51.3
PSO782G3302 Papaver somniferum HOM05D003771 ORTHO05D004396 4.8e-30 136.0 128 63.3
Sc06g0002410 Simmondsia chinensis HOM05D003771 ORTHO05D004396 3.1e-29 133.3 100 71.0
Mapoly0015s0202 Marchantia polymorpha HOM05D003771 ORTHO05D004396 1.6e-28 131.0 258 37.2
Pp3c15_18470 Physcomitrium patens HOM05D003771 ORTHO05D004396 6.8e-24 115.5 256 35.5
Lju50A19G12 Lonicera japonica HOM05D003771 ORTHO05D004396 8.8e-24 115.2 128 52.3
TAR636G2791 Trochodendron aralioides HOM05D000880 ORTHO05D004760 1.1e-21 108.2 72 73.6
RcHm_v2.0_Chr2g0143661 Rosa chinensis HOM05D003771 ORTHO05D010311 5.2e-16 89.4 130 43.8
HanXRQChr05g0138121 Helianthus annuus HOM05D003771 ORTHO05D004396 8.8e-16 88.6 93 50.5
AagrBONN_evm.TU.Sc2ySwM_228.2999 Anthoceros agrestis HOM05D003771 ORTHO05D004396 7.5e-15 85.5 234 33.3
AagrBONN_evm.TU.Sc2ySwM_369.332 Anthoceros agrestis HOM05D003771 ORTHO05D004396 1.3e-14 84.7 229 33.6
AagrBONN_evm.TU.Sc2ySwM_228.3008 Anthoceros agrestis HOM05D003771 ORTHO05D004396 3.7e-06 56.6 43 62.8


User provided reference genes

Program Settings