Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20747 Vaccinium macrocarpon HOM05D003771 ORTHO05D004396 2.4e-176 622.1 321 100.0
Rhsim01G0106700 Rhododendron simsii HOM05D003771 ORTHO05D004396 7.9e-95 351.3 309 67.6
Actinidia02465 Actinidia chinensis HOM05D003771 ORTHO05D004396 1.0e-89 334.3 308 63.3
CSS0004980 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 1.7e-89 333.6 308 63.0
Dinv12623 Davidia involucrata HOM05D003771 ORTHO05D004396 2.6e-85 319.7 310 60.6
CSS0043776 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 1.8e-83 313.5 407 51.1
Atru.chr12.1314 Acer truncatum HOM05D003771 ORTHO05D004396 5.3e-83 312.0 310 58.7
GSVIVG01022289001 Vitis vinifera HOM05D003771 ORTHO05D004396 1.9e-80 303.5 310 58.7
CAN.G587.52 Capsicum annuum HOM05D003771 ORTHO05D004396 4.2e-80 302.4 310 57.4
Eucgr.E04317 Eucalyptus grandis HOM05D003771 ORTHO05D004396 5.5e-80 302.0 310 55.8
Sopen05g020060 Solanum pennellii HOM05D003771 ORTHO05D004396 7.2e-80 301.6 310 57.4
Nitab4.5_0000019g0010 Nicotiana tabacum HOM05D003771 ORTHO05D004396 9.4e-80 301.2 310 57.1
Aqoxy3G04250 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 3.6e-79 299.3 311 56.9
PGR044G2258 Punica granatum HOM05D003771 ORTHO05D004396 3.6e-79 299.3 308 56.2
Potri.018G149400 Populus trichocarpa HOM05D003771 ORTHO05D004396 4.7e-79 298.9 310 57.7
Cc06_g23760 Coffea canephora HOM05D003771 ORTHO05D004396 6.1e-79 298.5 310 57.4
Sc06g0002410 Simmondsia chinensis HOM05D003771 ORTHO05D004396 8.0e-79 298.1 308 56.2
QL11p007303 Quercus lobata HOM05D003771 ORTHO05D004396 3.0e-78 296.2 310 57.4
Sabra18G0126200 Salix brachista HOM05D003771 ORTHO05D004396 3.0e-78 296.2 309 57.6
Migut.L01925 Erythranthe guttata HOM05D003771 ORTHO05D004396 4.0e-78 295.8 310 55.5
Nn3g19428 Nelumbo nucifera HOM05D003771 ORTHO05D004396 4.0e-78 295.8 308 56.2
Nn1g00173 Nelumbo nucifera HOM05D003771 ORTHO05D004396 1.5e-77 293.9 310 56.1
PSO782G3876 Papaver somniferum HOM05D003771 ORTHO05D004396 1.5e-77 293.9 309 57.6
SalBow5G2520 Salvia bowleyana HOM05D003771 ORTHO05D004396 1.5e-77 293.9 310 55.2
PSO063G0153 Papaver somniferum HOM05D003771 ORTHO05D004396 4.4e-77 292.4 309 57.3
AUR62014286 Chenopodium quinoa HOM05D003771 ORTHO05D004396 9.7e-77 291.2 312 55.1
Aa31sc328G10 Aethionema arabicum HOM05D003771 ORTHO05D004396 2.2e-76 290.0 310 53.5
SGA_v2.0_scaffold21G09599 Striga asiatica HOM05D003771 ORTHO05D004396 3.7e-76 289.3 310 54.8
CiPaw.15G162500 Carya illinoinensis HOM05D003771 ORTHO05D004396 8.3e-76 288.1 308 56.5
MSTRG.26513 Avicennia marina HOM05D003771 ORTHO05D004396 1.8e-75 287.0 310 54.8
MBI14_g32940_MAGBIO Magnolia biondii HOM05D003771 ORTHO05D004396 2.4e-75 286.6 311 55.6
Haze_19080 Corylus avellana HOM05D003771 ORTHO05D004396 4.1e-75 285.8 308 55.8
Lj5A798G49 Lonicera japonica HOM05D003771 ORTHO05D004396 2.0e-74 283.5 311 54.3
DCAR_020453 Daucus carota HOM05D003771 ORTHO05D004396 2.7e-74 283.1 308 54.2
MD04G1002300 Malus domestica HOM05D003771 ORTHO05D004396 7.7e-74 281.6 308 55.8
FAN17G2138 Fragaria x ananassa HOM05D003771 ORTHO05D004396 1.0e-73 281.2 308 55.2
AUR62034148 Chenopodium quinoa HOM05D003771 ORTHO05D004396 1.3e-73 280.8 312 53.5
RcHm_v2.0_Chr4g0384941 Rosa chinensis HOM05D003771 ORTHO05D004396 1.3e-73 280.8 308 55.5
COL.COLO4_37655 Corchorus olitorius HOM05D003771 ORTHO05D004396 1.7e-73 280.4 310 54.2
FvH4_4g00210 Fragaria vesca HOM05D003771 ORTHO05D004396 5.0e-73 278.9 308 54.9
CDE07G1201 Ceratophyllum demersum HOM05D003771 ORTHO05D004396 8.5e-73 278.1 309 53.7
TAR383G0820 Trochodendron aralioides HOM05D003771 ORTHO05D004396 1.1e-72 277.7 326 52.5
CANSAT64G2070 Cannabis sativa HOM05D003771 ORTHO05D004396 1.5e-72 277.3 309 56.0
Gohir.A05G000200 Gossypium hirsutum HOM05D003771 ORTHO05D004396 1.9e-72 276.9 310 54.2
Gorai.009G000200 Gossypium raimondii HOM05D003771 ORTHO05D004396 1.9e-72 276.9 310 54.2
Oeu008632.1 Olea europaea HOM05D003771 ORTHO05D004396 1.9e-72 276.9 310 54.5
Ciclev10007279m.g Citrus clementina HOM05D003771 ORTHO05D004396 4.2e-72 275.8 310 53.9
TWI34G0561 Tripterygium wilfordii HOM05D003771 ORTHO05D004396 4.2e-72 275.8 310 54.2
Gohir.D05G000400 Gossypium hirsutum HOM05D003771 ORTHO05D004396 5.5e-72 275.4 310 53.9
Thecc.09G205400 Theobroma cacao HOM05D003771 ORTHO05D004396 5.5e-72 275.4 310 53.5
ATR0626G390 Amborella trichopoda HOM05D003771 ORTHO05D004396 1.2e-71 274.2 319 51.1
MELO3C009070.2 Cucumis melo HOM05D003771 ORTHO05D004396 1.6e-71 273.9 310 53.5
FAN22G1465 Fragaria x ananassa HOM05D003771 ORTHO05D004396 1.6e-71 273.9 320 53.8
ClCG04G000570 Citrullus lanatus HOM05D003771 ORTHO05D004396 2.1e-71 273.5 310 53.5
Phvul.002G302000 Phaseolus vulgaris HOM05D003771 ORTHO05D004396 6.1e-71 271.9 309 53.4
Hund03218 Selenicereus undatus HOM05D003771 ORTHO05D004396 6.1e-71 271.9 316 51.9
Ah.04g162600 Amaranthus hybridus HOM05D003771 ORTHO05D004396 8.0e-71 271.6 316 51.9
ECA233G1083 Erigeron canadensis HOM05D003771 ORTHO05D004396 8.0e-71 271.6 310 53.5
Lsat_1_v5_gn_1_6680 Lactuca sativa HOM05D003771 ORTHO05D004396 1.8e-70 270.4 310 53.5
VMungo0251G3699 Vigna mungo HOM05D003771 ORTHO05D004396 1.8e-70 270.4 309 53.1
CsaV3_4G031470 Cucumis sativus L. HOM05D003771 ORTHO05D004396 2.3e-70 270.0 310 52.6
FAN12G2055 Fragaria x ananassa HOM05D003771 ORTHO05D004396 2.3e-70 270.0 320 52.8
HanXRQChr02g0040541 Helianthus annuus HOM05D003771 ORTHO05D004396 3.0e-70 269.6 310 53.2
Os03g0265700 Oryza sativa ssp. japonica HOM05D003771 ORTHO05D004396 3.0e-70 269.6 310 52.6
Manes.02G223900 Manihot esculenta HOM05D003771 ORTHO05D004396 4.0e-70 269.2 310 53.9
Lj4g0002190 Lotus japonicus HOM05D003771 ORTHO05D004396 5.2e-70 268.9 310 52.3
Duzib168G1435 Durio zibethinus HOM05D003771 ORTHO05D004396 6.8e-70 268.5 310 53.9
Lju50C19G3 Lonicera japonica HOM05D003771 ORTHO05D004396 6.8e-70 268.5 308 52.9
MD15G1427900 Malus domestica HOM05D003771 ORTHO05D004396 8.8e-70 268.1 308 53.6
Glyma.05G220300 Glycine max HOM05D003771 ORTHO05D004396 2.0e-69 266.9 309 53.4
Sed0018603 Sechium edule HOM05D003771 ORTHO05D004396 2.6e-69 266.5 310 52.9
AL3G44140 Arabidopsis lyrata HOM05D003771 ORTHO05D004396 4.8e-68 262.3 310 50.6
Thhalv10012482m.g Eutrema salsugineum HOM05D003771 ORTHO05D004396 6.3e-68 261.9 310 51.3
CARHR104050 Cardamine hirsuta HOM05D003771 ORTHO05D004396 1.1e-67 261.2 309 50.8
Carub.0013s0005 Capsella rubella HOM05D003771 ORTHO05D004396 1.8e-67 260.4 310 50.3
Sp6g13880 Schrenkiella parvula HOM05D003771 ORTHO05D004396 1.8e-67 260.4 310 50.3
Glyma.08G026700 Glycine max HOM05D003771 ORTHO05D004396 2.4e-67 260.0 309 52.1
BcaC04g20648 Brassica carinata HOM05D003771 ORTHO05D004396 3.1e-67 259.6 310 50.3
BcaB08g35516 Brassica carinata HOM05D003771 ORTHO05D004396 4.1e-67 259.2 310 50.3
THA.LOC104808936 Tarenaya hassleriana HOM05D003771 ORTHO05D004396 4.1e-67 259.2 313 50.8
AT2G07360 Arabidopsis thaliana HOM05D003771 ORTHO05D004396 9.1e-67 258.1 312 50.6
Medtr8g100105 Medicago truncatula HOM05D003771 ORTHO05D004396 1.6e-66 257.3 310 51.3
TPR.G25458 Trifolium pratense HOM05D003771 ORTHO05D004396 1.6e-66 257.3 310 51.3
Psat7g020760 Pisum sativum HOM05D003771 ORTHO05D004396 2.7e-66 256.5 310 51.6
Zm00001eb011800 Zea mays HOM05D003771 ORTHO05D004396 2.7e-66 256.5 310 50.0
BcaC01g06134 Brassica carinata HOM05D003771 ORTHO05D004396 4.5e-66 255.8 310 49.7
Lalb_Chr05g0223831 Lupinus albus HOM05D003771 ORTHO05D004396 4.5e-66 255.8 309 51.1
SEGI_40037 Sequoiadendron giganteum HOM05D003771 ORTHO05D004396 2.9e-65 253.1 322 49.4
Ca_17443_v3 Cicer arietinum L. HOM05D003771 ORTHO05D004396 5.0e-65 252.3 310 50.6
A03p16060 Brassica napus HOM05D003771 ORTHO05D004396 1.5e-64 250.8 312 49.4
BolC3t14282H Brassica oleracea HOM05D003771 ORTHO05D004396 1.5e-64 250.8 312 49.4
BraA03t10897Z Brassica rapa HOM05D003771 ORTHO05D004396 1.5e-64 250.8 312 49.4
arahy.Tifrunner.gnm1.ann1.XKPK2Z Arachis hypogaea HOM05D003771 ORTHO05D004396 1.9e-64 250.4 310 49.7
BcaB01g04159 Brassica carinata HOM05D003771 ORTHO05D004396 1.9e-64 250.4 310 49.0
BraA10t43030Z Brassica rapa HOM05D003771 ORTHO05D004396 1.9e-64 250.4 313 49.8
C03p18900 Brassica napus HOM05D003771 ORTHO05D004396 5.5e-64 248.8 312 49.0
BolC9t56986H Brassica oleracea HOM05D003771 ORTHO05D004396 1.8e-62 243.8 329 47.4
arahy.Tifrunner.gnm1.ann1.TH49EC Arachis hypogaea HOM05D003771 ORTHO05D004396 7.5e-61 238.4 310 49.0
HPP92_018040 Vanilla planifolia HOM05D003771 ORTHO05D004396 7.5e-61 238.4 240 57.1
Cpa.g.sc91.64 Carica papaya HOM05D003771 ORTHO05D004396 8.3e-60 235.0 310 48.4
MD07G1055500 Malus domestica HOM05D003771 ORTHO05D004396 1.1e-59 234.6 318 49.1
HanXRQChr05g0138991 Helianthus annuus HOM05D003771 ORTHO05D004396 5.2e-54 215.7 310 44.8
EL10Ac4g08749 Beta vulgaris HOM05D003771 ORTHO05D004396 6.8e-54 215.3 146 77.4
Pp3c15_18470 Physcomitrium patens HOM05D003771 ORTHO05D004396 1.5e-53 214.2 317 41.6
unitig_899.g15421 Utricularia gibba HOM05D003771 ORTHO05D004396 7.5e-53 211.8 240 50.8
Aqoxy3G02692 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 1.1e-51 208.0 311 46.6
Peaxi162Scf00322g01517 Petunia axillaris HOM05D003771 ORTHO05D004396 1.4e-51 207.6 127 82.7
AagrBONN_evm.TU.Sc2ySwM_228.3008 Anthoceros agrestis HOM05D003771 ORTHO05D004396 7.0e-51 205.3 314 41.1
Mapoly0015s0202 Marchantia polymorpha HOM05D003771 ORTHO05D004396 7.8e-50 201.8 324 40.4
A10p09550 Brassica napus HOM05D003771 ORTHO05D004396 1.2e-47 194.5 249 48.6
C09p41060 Brassica napus HOM05D003771 ORTHO05D004396 1.2e-47 194.5 249 48.6
Hund19352 Selenicereus undatus HOM05D003771 ORTHO05D004396 3.7e-44 183.0 141 69.5
Prupe.7G042600 Prunus persica HOM05D003771 ORTHO05D004396 2.4e-43 180.3 239 47.7
SMO367G0435 Selaginella moellendorffii HOM05D003771 ORTHO05D004396 5.4e-43 179.1 342 36.3
AagrBONN_evm.TU.Sc2ySwM_228.2997 Anthoceros agrestis HOM05D003771 ORTHO05D004396 7.1e-35 152.1 140 55.0
AagrBONN_evm.TU.Sc2ySwM_369.331 Anthoceros agrestis HOM05D003771 ORTHO05D004396 7.1e-35 152.1 140 55.0
VMungo1209G0002 Vigna mungo HOM05D003771 ORTHO05D004396 1.5e-21 107.8 101 63.4
VMungo0331G1237 Vigna mungo HOM05D003771 ORTHO05D004396 3.8e-20 103.2 103 58.3
VMungo0331G1533 Vigna mungo HOM05D003771 ORTHO05D004396 3.4e-13 80.1 101 48.5
AagrBONN_evm.TU.Sc2ySwM_228.2996 Anthoceros agrestis HOM05D003771 ORTHO05D004396 1.9e-08 64.3 88 44.3
AagrBONN_evm.TU.Sc2ySwM_369.330 Anthoceros agrestis HOM05D003771 ORTHO05D004396 1.9e-08 64.3 88 44.3
Zm00001eb086760 Zea mays HOM05D003771 ORTHO05D004396 2.1e-07 60.8 36 80.6
HPP92_018039 Vanilla planifolia HOM05D003771 ORTHO05D004396 2.8e-07 60.5 34 79.4
Zm00001eb236470 Zea mays HOM05D003771 ORTHO05D004396 6.2e-07 59.3 39 74.4
Zm00001eb164270 Zea mays HOM05D003771 ORTHO05D004396 1.8e-06 57.8 39 71.8


User provided reference genes

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