Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20648 Vaccinium macrocarpon HOM05D007420 ORTHO05D009353 5.1e-188 661.0 349 100.0
vmacro07032 Vaccinium macrocarpon HOM05D030287 ORTHO05D018099 8.2e-61 238.4 131 93.1
vmacro22677 Vaccinium macrocarpon HOM05D030287 ORTHO05D018099 2.5e-57 226.9 128 90.6
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 2.9e-42 176.8 96 92.7
vmacro05337 Vaccinium macrocarpon HOM05D030287 ORTHO05D018099 8.8e-31 138.7 157 51.0
Cfa003340 Carpinus fangiana HOM05D007420 ORTHO05D009353 1.2e-22 111.7 69 78.3
Dinv36572 Davidia involucrata HOM05D007420 ORTHO05D009353 2.6e-22 110.5 69 78.3
Haze_25622 Corylus avellana HOM05D007420 ORTHO05D009353 5.7e-22 109.4 68 77.9
Eucgr.C01298 Eucalyptus grandis HOM05D007420 ORTHO05D009353 1.3e-21 108.2 69 75.4
Eucgr.C01109 Eucalyptus grandis HOM05D007420 ORTHO05D009353 2.2e-21 107.5 68 76.5
Actinidia22015 Actinidia chinensis HOM05D007420 ORTHO05D009353 3.7e-21 106.7 69 76.8
CSS0016223 Camellia sinensis var. sinensis HOM05D007420 ORTHO05D009353 3.7e-21 106.7 71 74.6
Eucgr.L02717 Eucalyptus grandis HOM05D007420 ORTHO05D009353 4.8e-21 106.3 69 73.9
CANSAT56G4260 Cannabis sativa HOM05D007420 ORTHO05D009353 1.8e-20 104.4 68 77.9
Ciclev10009973m.g Citrus clementina HOM05D007420 ORTHO05D009353 2.4e-20 104.0 69 75.4
Hma1.2p1_0018F.1_g012820 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 4.1e-20 103.2 69 76.8
Gorai.010G066200 Gossypium raimondii HOM05D007420 ORTHO05D009353 5.3e-20 102.8 69 72.5
QL02p087339 Quercus lobata HOM05D007420 ORTHO05D009353 5.3e-20 102.8 68 75.0
arahy.Tifrunner.gnm1.ann1.QR7ILI Arachis hypogaea HOM05D007420 ORTHO05D009353 9.1e-20 102.1 66 75.8
Glyma.05G010400 Glycine max HOM05D007420 ORTHO05D009353 9.1e-20 102.1 69 72.5
Gohir.A06G058200 Gossypium hirsutum HOM05D007420 ORTHO05D009353 9.1e-20 102.1 68 73.5
Gohir.D06G056500 Gossypium hirsutum HOM05D007420 ORTHO05D009353 9.1e-20 102.1 68 73.5
Atru.chr7.1239 Acer truncatum HOM05D007420 ORTHO05D009353 1.2e-19 101.7 68 75.0
Prupe.7G237700 Prunus persica HOM05D007420 ORTHO05D009353 1.6e-19 101.3 66 75.8
CiPaw.03G239800 Carya illinoinensis HOM05D007420 ORTHO05D009353 2.7e-19 100.5 68 72.1
Cc06_g08970 Coffea canephora HOM05D007420 ORTHO05D009353 2.7e-19 100.5 68 76.5
arahy.Tifrunner.gnm1.ann1.XPL4AE Arachis hypogaea HOM05D007420 ORTHO05D009353 3.5e-19 100.1 66 74.2
Phvul.003G161000 Phaseolus vulgaris HOM05D007420 ORTHO05D009353 4.5e-19 99.8 68 70.6
Sabra11G0015300 Salix brachista HOM05D007420 ORTHO05D009353 4.5e-19 99.8 75 68.0
SalBow6G6280 Salvia bowleyana HOM05D007420 ORTHO05D009353 4.5e-19 99.8 69 72.5
Manes.06G052500 Manihot esculenta HOM05D007420 ORTHO05D009353 5.9e-19 99.4 68 73.5
Lalb_Chr13g0302091 Lupinus albus HOM05D007420 ORTHO05D009353 1.0e-18 98.6 68 73.5
Nn2g11931 Nelumbo nucifera HOM05D007420 ORTHO05D009353 2.2e-18 97.4 68 72.1
Thecc.09G120400 Theobroma cacao HOM05D007420 ORTHO05D009353 2.2e-18 97.4 69 68.1
PGR102G0502 Punica granatum HOM05D007420 ORTHO05D009353 3.8e-18 96.7 67 68.7
vmacro12657 Vaccinium macrocarpon HOM05D000712 ORTHO05D000617 3.8e-18 96.7 74 67.6
TWI34G1269 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 8.5e-18 95.5 70 71.4
vmacro01242 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 8.5e-18 95.5 52 96.2
CDE01G0426 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 1.1e-17 95.1 68 72.1
Oeu021594.1 Olea europaea HOM05D007420 ORTHO05D009353 1.1e-17 95.1 68 72.1
Potri.011G024500 Populus trichocarpa HOM05D007420 ORTHO05D009353 1.5e-17 94.7 70 70.0
MD15G1177800 Malus domestica HOM05D007420 ORTHO05D009353 3.2e-17 93.6 66 72.7
TWI32G1185 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 4.2e-17 93.2 70 70.0
FAN22G2307 Fragaria x ananassa HOM05D022909 ORTHO05D009353 5.5e-17 92.8 81 63.0
RcHm_v2.0_Chr2g0089401 Rosa chinensis HOM05D007420 ORTHO05D009353 7.2e-17 92.4 67 70.1
Hma1.2p1_0018F.1_g012830 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 1.2e-16 91.7 55 81.8
Sed0006703 Sechium edule HOM05D007420 ORTHO05D009353 1.2e-16 91.7 68 70.6
MD02G1037600 Malus domestica HOM05D007420 ORTHO05D009353 1.6e-16 91.3 67 68.7
Nn8g39361 Nelumbo nucifera HOM05D007420 ORTHO05D009353 1.6e-16 91.3 68 67.6
FvH4_1g03930 Fragaria vesca HOM05D007420 ORTHO05D009353 2.1e-16 90.9 67 71.6
FAN26G1322 Fragaria x ananassa HOM05D007420 ORTHO05D009353 2.7e-16 90.5 79 63.3
Psat4g040560 Pisum sativum HOM05D007420 ORTHO05D009353 2.7e-16 90.5 67 67.2
TPR.G9078 Trifolium pratense HOM05D007420 ORTHO05D009353 2.7e-16 90.5 67 70.1
CDE03G0079 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 3.6e-16 90.1 68 69.1
FAN23G1905 Fragaria x ananassa HOM05D007420 ORTHO05D009353 3.6e-16 90.1 68 67.6
FAN28G1248 Fragaria x ananassa HOM05D007420 ORTHO05D009353 3.6e-16 90.1 68 67.6
MELO3C004528.2 Cucumis melo HOM05D007420 ORTHO05D009353 4.7e-16 89.7 73 67.1
Nitab4.5_0000750g0050 Nicotiana tabacum HOM05D007420 ORTHO05D009353 4.7e-16 89.7 69 69.6
Nitab4.5_0001193g0010 Nicotiana tabacum HOM05D007420 ORTHO05D009353 4.7e-16 89.7 69 69.6
CAN.G1424.4 Capsicum annuum HOM05D007420 ORTHO05D009353 6.1e-16 89.4 68 72.1
Eucgr.C01288 Eucalyptus grandis HOM05D007420 ORTHO05D009353 1.0e-15 88.6 59 72.9
Lj4g0001906 Lotus japonicus HOM05D007420 ORTHO05D009353 1.0e-15 88.6 72 65.3
Hund09157 Selenicereus undatus HOM05D007420 ORTHO05D009353 1.4e-15 88.2 68 70.6
FAN19G3121 Fragaria x ananassa HOM05D007420 ORTHO05D009353 3.0e-15 87.0 60 71.7
SalBow1G2150 Salvia bowleyana HOM05D007420 ORTHO05D009353 3.0e-15 87.0 65 70.8
unitig_85.g27256 Utricularia gibba HOM05D000953 ORTHO05D000231 4.0e-15 86.7 55 80.0
DCAR_014860 Daucus carota HOM05D007420 ORTHO05D009353 5.2e-15 86.3 69 65.2
CsaV3_2G002630 Cucumis sativus L. HOM05D007420 ORTHO05D009353 6.8e-15 85.9 65 67.7
HPP92_024085 Vanilla planifolia HOM05D007420 ORTHO05D009353 8.8e-15 85.5 69 65.2
ClCG11G002810 Citrullus lanatus HOM05D007420 ORTHO05D009353 1.2e-14 85.1 68 64.7
HanXRQChr03g0062071 Helianthus annuus HOM05D007420 ORTHO05D009353 1.5e-14 84.7 67 64.2
SHI28897 Sapria himalayana HOM05D007420 ORTHO05D009353 1.5e-14 84.7 67 62.7
Sc14g0000270 Simmondsia chinensis HOM05D007420 ORTHO05D009353 1.5e-14 84.7 96 54.2
THA.LOC104809007 Tarenaya hassleriana HOM05D007420 ORTHO05D009353 1.5e-14 84.7 70 62.9
Migut.L01525 Erythranthe guttata HOM05D007420 ORTHO05D009353 2.0e-14 84.3 65 69.2
ECA240G1805 Erigeron canadensis HOM05D007420 ORTHO05D009353 3.4e-14 83.6 59 69.5
Thhalv10019233m.g Eutrema salsugineum HOM05D007420 ORTHO05D009353 3.4e-14 83.6 68 66.2
Peaxi162Scf00361g00611 Petunia axillaris HOM05D007420 ORTHO05D009353 4.4e-14 83.2 76 63.2
Aa31sc12G90 Aethionema arabicum HOM05D007420 ORTHO05D009353 5.7e-14 82.8 71 59.2
PSO170G5167 Papaver somniferum HOM05D007420 ORTHO05D009353 7.5e-14 82.4 52 78.8
AL2G27600 Arabidopsis lyrata HOM05D007420 ORTHO05D009353 9.8e-14 82.0 68 64.7
Carub.0002s1522 Capsella rubella HOM05D007420 ORTHO05D009353 9.8e-14 82.0 68 64.7
Sp5g23780 Schrenkiella parvula HOM05D007420 ORTHO05D009353 9.8e-14 82.0 68 64.7
BcaB03g15440 Brassica carinata HOM05D007420 ORTHO05D009353 2.2e-13 80.9 72 59.7
BcaC08g45947 Brassica carinata HOM05D007420 ORTHO05D009353 2.2e-13 80.9 72 59.7
A07p31870 Brassica napus HOM05D007420 ORTHO05D009353 2.8e-13 80.5 67 61.2
C06p37440 Brassica napus HOM05D007420 ORTHO05D032647 2.8e-13 80.5 68 63.2
BolC6t38847H Brassica oleracea HOM05D007420 ORTHO05D009353 2.8e-13 80.5 68 63.2
CARHR061490 Cardamine hirsuta HOM05D007420 ORTHO05D009353 2.8e-13 80.5 68 63.2
AUR62033448 Chenopodium quinoa HOM05D007420 ORTHO05D009353 2.8e-13 80.5 70 61.4
AT1G68680 Arabidopsis thaliana HOM05D007420 ORTHO05D009353 3.7e-13 80.1 68 63.2
Duzib150G1214 Durio zibethinus HOM05D007420 ORTHO05D009353 3.7e-13 80.1 49 79.6
BcaB03g15439 Brassica carinata HOM05D007420 ORTHO05D009353 4.8e-13 79.7 65 61.5
BraA07t30816Z Brassica rapa HOM05D007420 ORTHO05D009353 8.3e-13 79.0 66 62.1
EL10Ac8g18588 Beta vulgaris HOM05D007420 ORTHO05D009353 1.8e-12 77.8 68 63.2
SEGI_24866 Sequoiadendron giganteum HOM05D007420 ORTHO05D009353 4.1e-12 76.6 93 52.7
Solyc07g005430.3 Solanum lycopersicum HOM05D007420 ORTHO05D009353 4.1e-12 76.6 63 65.1
Sopen07g001360 Solanum pennellii HOM05D007420 ORTHO05D009353 4.1e-12 76.6 63 65.1
vmacro21891 Vaccinium macrocarpon HOM05D000311 ORTHO05D000183 4.1e-12 76.6 51 74.5
Pp3c11_6600 Physcomitrium patens HOM05D007420 ORTHO05D009353 1.2e-11 75.1 61 60.7
GSVIVG01015481001 Vitis vinifera HOM05D007420 ORTHO05D009353 1.2e-11 75.1 53 66.0
Zm00001eb283090 Zea mays HOM05D007420 ORTHO05D009353 3.5e-11 73.6 71 57.7
AagrBONN_evm.TU.Sc2ySwM_362.2614 Anthoceros agrestis HOM05D007420 ORTHO05D009353 1.0e-10 72.0 53 71.7
Mapoly0048s0106 Marchantia polymorpha HOM05D007420 ORTHO05D009353 1.7e-10 71.2 67 56.7
CBR_g3296 Chara braunii HOM05D007420 ORTHO05D009353 6.5e-10 69.3 56 58.9
Os05g0176600 Oryza sativa ssp. japonica HOM05D007420 ORTHO05D009353 3.3e-09 67.0 43 79.1
PGSC0003DMG401011174 Solanum tuberosum HOM05D007420 ORTHO05D009353 4.2e-09 66.6 83 48.2
MCO15G341 Micromonas commoda HOM05D007420 ORTHO05D009353 8.9e-07 58.9 69 47.8
TPR.G33 Trifolium pratense HOM05D023162 ORTHO05D411915 7.5e-06 55.8 214 26.6


User provided reference genes

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