Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 1.6e-180 636.0 320 100.0
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 1.6e-156 556.2 324 89.2
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 1.2e-151 540.0 328 85.1
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 6.0e-143 511.1 320 80.9
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 6.6e-142 507.7 323 81.1
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 6.2e-140 501.1 323 79.3
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 1.2e-138 496.9 323 78.6
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.2e-138 496.9 325 76.6
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 1.2e-138 496.9 319 77.4
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 4.9e-137 491.5 331 74.9
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 6.4e-137 491.1 349 73.4
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 2.4e-136 489.2 323 76.2
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 1.2e-135 486.9 322 76.4
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 1.5e-133 479.9 325 75.4
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 1.5e-133 479.9 324 74.4
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 1.9e-133 479.6 324 74.7
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 4.3e-133 478.4 323 74.0
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 1.6e-132 476.5 357 69.5
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 1.6e-132 476.5 349 72.2
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 2.1e-132 476.1 320 72.8
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 2.8e-132 475.7 326 73.6
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 2.8e-132 475.7 323 73.4
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 6.2e-132 474.6 323 74.9
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 8.1e-132 474.2 322 75.2
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 8.1e-132 474.2 320 75.6
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 8.1e-132 474.2 321 75.4
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 1.4e-131 473.4 325 76.0
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 1.8e-131 473.0 320 75.3
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 1.8e-131 473.0 324 73.5
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 2.4e-131 472.6 324 71.6
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 2.4e-131 472.6 327 73.4
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 2.4e-131 472.6 324 73.5
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 4.0e-131 471.9 326 73.3
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 6.9e-131 471.1 325 72.6
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 1.5e-130 469.9 321 72.0
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 2.6e-130 469.2 321 73.5
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 3.4e-130 468.8 324 70.7
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 5.8e-130 468.0 325 72.0
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 2.9e-129 465.7 328 73.8
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 3.8e-129 465.3 322 73.3
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 4.9e-129 464.9 335 70.4
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 8.4e-129 464.2 328 74.7
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 1.4e-128 463.4 320 75.3
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 1.9e-128 463.0 328 74.1
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 2.4e-128 462.6 323 73.7
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 2.4e-128 462.6 286 78.7
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 3.2e-128 462.2 322 72.4
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 7.1e-128 461.1 328 74.1
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 2.1e-127 459.5 324 71.0
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 2.1e-127 459.5 326 70.2
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 2.7e-127 459.1 322 73.6
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 2.7e-127 459.1 328 73.8
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.7e-127 459.1 327 72.8
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 4.6e-127 458.4 327 72.5
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 4.6e-127 458.4 322 72.0
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 6.0e-127 458.0 327 72.2
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 7.8e-127 457.6 329 71.1
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 1.0e-126 457.2 320 72.2
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 1.0e-126 457.2 324 73.5
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.3e-126 456.8 318 72.6
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 1.7e-126 456.4 323 69.7
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 3.0e-126 455.7 323 72.1
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 3.9e-126 455.3 318 72.0
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 3.9e-126 455.3 327 72.2
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 5.1e-126 454.9 319 72.4
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 6.6e-126 454.5 329 69.9
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 8.7e-126 454.1 319 71.8
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 8.7e-126 454.1 329 72.0
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 1.1e-125 453.8 324 70.4
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.1e-125 453.8 327 71.9
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.1e-125 453.8 328 73.2
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 1.5e-125 453.4 318 70.4
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 1.9e-125 453.0 324 70.7
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 1.9e-125 453.0 321 72.0
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 3.3e-125 452.2 331 70.7
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 4.3e-125 451.8 327 70.9
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 4.3e-125 451.8 327 69.7
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 7.3e-125 451.1 321 70.7
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 1.3e-124 450.3 324 69.4
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.6e-124 449.9 317 73.2
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 6.2e-124 448.0 322 70.2
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 6.2e-124 448.0 322 70.2
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 6.2e-124 448.0 324 68.5
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 1.1e-123 447.2 327 69.4
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 1.8e-123 446.4 321 71.0
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 2.4e-123 446.0 318 70.4
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 3.1e-123 445.7 324 68.5
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 3.1e-123 445.7 317 72.2
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 4.0e-123 445.3 321 69.2
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 5.3e-123 444.9 323 69.3
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.6e-122 442.6 319 70.5
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 7.6e-122 441.0 324 67.3
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 1.7e-121 439.9 324 68.8
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 3.8e-121 438.7 321 71.3
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.9e-120 436.4 318 69.2
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 4.2e-120 435.3 324 68.5
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 3.5e-119 432.2 325 68.0
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 1.5e-117 426.8 284 76.8
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 9.0e-115 417.5 324 65.4
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 8.4e-113 411.0 499 49.5
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 4.6e-111 405.2 328 63.4
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 1.9e-109 399.8 283 67.5
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 2.5e-109 399.4 326 65.3
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 7.4e-109 397.9 312 67.9
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 4.8e-108 395.2 263 74.5
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 4.0e-107 392.1 265 70.2
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 3.4e-106 389.0 384 54.2
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.0e-89 332.0 199 81.9
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 1.6e-87 327.0 185 87.0
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 3.0e-86 322.8 190 83.2
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 4.1e-83 312.4 170 90.0
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 9.1e-83 311.2 319 51.1
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 2.6e-82 309.7 178 84.8
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 1.3e-81 307.4 178 84.3
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 1.7e-81 307.0 170 88.2
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 6.5e-81 305.1 259 57.1
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 4.4e-69 265.8 201 66.7
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 6.3e-60 235.3 185 64.9
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 8.6e-57 224.9 122 89.3
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 2.1e-55 220.3 217 56.7
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.2e-50 204.5 132 77.3
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 5.0e-49 199.1 121 80.2
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 9.5e-48 194.9 163 55.2
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 1.4e-46 191.0 119 74.8
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 5.7e-45 185.7 115 78.3
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 4.7e-39 166.0 121 71.9
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 9.8e-37 158.3 95 83.2
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 3.7e-36 156.4 150 54.7
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 1.4e-22 111.3 73 72.6
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 3.9e-17 93.2 120 48.3
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 4.4e-13 79.7 161 33.5
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 5.8e-13 79.3 55 69.1
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 9.9e-13 78.6 165 34.5
MCO17G084 Micromonas commoda HOM05D051517 ORTHO05D006483 3.5e-10 70.1 174 27.0
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 5.1e-09 66.2 52 69.2
Cre02.g103000 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 1.5e-08 64.7 142 33.1
Cre09.g386747 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 1.6e-07 61.2 146 30.8
Cre12.g552600 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 3.1e-06 57.0 144 30.6
PRCOL_00003044 Prasinoderma coloniale HOM05D024924 ORTHO05D006483 4.0e-06 56.6 150 30.0
MCO17G075 Micromonas commoda HOM05D051517 ORTHO05D006483 9.0e-06 55.5 189 24.3


User provided reference genes

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