Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro20454 Vaccinium macrocarpon HOM05D007779 ORTHO05D009863 1.3e-137 493.0 238 100.0
Actinidia26989 Actinidia chinensis HOM05D007779 ORTHO05D010440 3.5e-63 245.7 216 57.4
Peaxi162Scf00314g00026 Petunia axillaris HOM05D033978 ORTHO05D024718 4.1e-40 169.1 184 47.3
Aqoxy7G00772 Aquilegia oxysepala HOM05D008706 ORTHO05D010440 2.9e-25 119.8 204 35.8
CiPaw.07G070500 Carya illinoinensis HOM05D007779 ORTHO05D009863 1.6e-20 104.0 220 37.3
Cfa006387 Carpinus fangiana HOM05D007779 ORTHO05D009863 2.1e-20 103.6 206 39.8
QL03p029097 Quercus lobata HOM05D007779 ORTHO05D009863 4.8e-20 102.4 219 37.0
Haze_04390 Corylus avellana HOM05D007779 ORTHO05D009863 6.2e-20 102.1 205 38.0
Aqoxy7G01704 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 9.0e-19 98.2 199 33.7
Aqoxy7G01734 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 4.9e-17 92.4 199 33.7
MELO3C004412.2 Cucumis melo HOM05D007779 ORTHO05D009863 6.4e-17 92.0 196 35.7
Sabra19G0016500 Salix brachista HOM05D007779 ORTHO05D009863 1.1e-16 91.3 174 39.1
FAN02G2389 Fragaria x ananassa HOM05D007779 ORTHO05D009863 1.9e-16 90.5 221 34.8
MD12G1244700 Malus domestica HOM05D007779 ORTHO05D009863 2.4e-16 90.1 196 33.7
Sabra19G0026600 Salix brachista HOM05D007779 ORTHO05D009863 2.4e-16 90.1 193 37.3
CsaV3_2G003840 Cucumis sativus L. HOM05D007779 ORTHO05D009863 4.2e-16 89.4 196 35.7
Sed0024421 Sechium edule HOM05D007779 ORTHO05D009863 2.1e-15 87.0 198 35.4
TWI56G0837 Tripterygium wilfordii HOM05D007779 ORTHO05D009863 2.1e-15 87.0 208 35.1
Ciclev10019572m.g Citrus clementina HOM05D007779 ORTHO05D009863 2.7e-15 86.7 190 38.4
Prupe.6G347200 Prunus persica HOM05D007779 ORTHO05D009863 7.9e-15 85.1 196 34.2
ClCG02G016930 Citrullus lanatus HOM05D007779 ORTHO05D009863 1.0e-14 84.7 196 34.7
FvH4_6g02440 Fragaria vesca HOM05D007779 ORTHO05D009863 1.3e-14 84.3 201 34.3
FAN05G4719 Fragaria x ananassa HOM05D007779 ORTHO05D009863 1.3e-14 84.3 205 35.1
FAN05G5524 Fragaria x ananassa HOM05D007779 ORTHO05D009863 1.3e-14 84.3 205 35.1
arahy.Tifrunner.gnm1.ann1.C2UZEY Arachis hypogaea HOM05D007779 ORTHO05D009863 1.8e-14 84.0 196 34.2
Potri.019G013900 Populus trichocarpa HOM05D007779 ORTHO05D009863 1.8e-14 84.0 173 37.0
RcHm_v2.0_Chr3g0450231 Rosa chinensis HOM05D007779 ORTHO05D009863 1.8e-14 84.0 184 35.9
Lj1g0005336 Lotus japonicus HOM05D007779 ORTHO05D009863 2.3e-14 83.6 173 34.1
Peaxi162Scf00347g00087 Petunia axillaris HOM05D008706 ORTHO05D010440 2.3e-14 83.6 194 33.5
arahy.Tifrunner.gnm1.ann1.DL8VF6 Arachis hypogaea HOM05D007779 ORTHO05D009863 3.9e-14 82.8 196 33.7
PSO063G7563 Papaver somniferum HOM05D008326 ORTHO05D001155 3.9e-14 82.8 136 36.8
FAN14G0926 Fragaria x ananassa HOM05D007779 ORTHO05D009863 8.7e-14 81.6 201 33.8
FAN14G4661 Fragaria x ananassa HOM05D007779 ORTHO05D009863 8.7e-14 81.6 201 33.8
Ca_09436_v3 Cicer arietinum L. HOM05D007779 ORTHO05D009863 1.5e-13 80.9 195 32.8
PSO782G2276 Papaver somniferum HOM05D008326 ORTHO05D001155 1.5e-13 80.9 141 35.5
VMungo0540G1456 Vigna mungo HOM05D007779 ORTHO05D009863 1.9e-13 80.5 197 33.0
Oeu016027.1 Olea europaea HOM05D007779 ORTHO05D009863 2.5e-13 80.1 147 32.7
Phvul.006G104000 Phaseolus vulgaris HOM05D007779 ORTHO05D009863 2.5e-13 80.1 197 32.5
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 3.3e-13 79.7 160 31.9
FAN09G2319 Fragaria x ananassa HOM05D007779 ORTHO05D009863 3.3e-13 79.7 180 33.9
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 3.3e-13 79.7 148 33.1
Thecc.05G277100 Theobroma cacao HOM05D007779 ORTHO05D009863 4.3e-13 79.3 184 34.2
COL.COLO4_15414 Corchorus olitorius HOM05D007779 ORTHO05D009863 5.6e-13 79.0 185 35.1
Gohir.A09G096401 Gossypium hirsutum HOM05D001729 ORTHO05D001155 5.6e-13 79.0 148 31.1
Peaxi162Scf00136g00622 Petunia axillaris HOM05D008706 ORTHO05D010440 7.4e-13 78.6 175 33.7
Aqoxy1G00049 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 9.6e-13 78.2 165 34.5
Glyma.19G246800 Glycine max HOM05D007779 ORTHO05D009863 9.6e-13 78.2 196 32.1
Gohir.D09G096101 Gossypium hirsutum HOM05D001729 ORTHO05D001155 1.3e-12 77.8 148 32.4
Aqoxy7G01705 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 1.6e-12 77.4 139 38.1
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 2.1e-12 77.0 154 29.9
AT5G03970 Arabidopsis thaliana HOM05D007779 ORTHO05D009863 2.8e-12 76.6 186 32.3
Carub.0006s0291 Capsella rubella HOM05D007779 ORTHO05D009863 2.8e-12 76.6 192 31.2
Medtr7g115440 Medicago truncatula HOM05D007779 ORTHO05D009863 1.4e-11 74.3 195 30.8
PGSC0003DMG400024780 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.4e-11 74.3 173 30.6
Sopen01g043690 Solanum pennellii HOM05D008706 ORTHO05D010440 1.8e-11 73.9 162 30.9
Sopen01g043720 Solanum pennellii HOM05D008706 ORTHO05D010440 1.8e-11 73.9 162 30.9
TPR.G6996 Trifolium pratense HOM05D007779 ORTHO05D009863 1.8e-11 73.9 195 32.3
PSO782G1123 Papaver somniferum HOM05D008326 ORTHO05D001155 2.0e-10 70.5 142 31.0
THA.LOC104805831 Tarenaya hassleriana HOM05D007779 ORTHO05D009863 2.0e-10 70.5 177 34.5
CARHR209310 Cardamine hirsuta HOM05D007779 ORTHO05D009863 4.5e-10 69.3 186 31.2
Psat0s3161g0280 Pisum sativum HOM05D007779 ORTHO05D009863 4.5e-10 69.3 170 31.2
Rhsim08G0064700 Rhododendron simsii HOM05D007779 ORTHO05D009863 5.8e-10 68.9 141 32.6
Duzib106G0954 Durio zibethinus HOM05D007779 ORTHO05D009863 7.6e-10 68.6 169 34.3
PSO087G0001 Papaver somniferum HOM05D008326 ORTHO05D001155 1.0e-09 68.2 151 31.8
ECA240G1786 Erigeron canadensis HOM05D000007 ORTHO05D000676 1.3e-09 67.8 116 37.1
Sabra09G0127200 Salix brachista HOM05D001729 ORTHO05D001155 1.3e-09 67.8 138 26.8
RcHm_v2.0_Chr2g0163051 Rosa chinensis HOM05D001729 ORTHO05D001155 1.7e-09 67.4 137 28.5
PSO210G6463 Papaver somniferum HOM05D001729 ORTHO05D001155 2.2e-09 67.0 99 33.3
ECA240G3692 Erigeron canadensis HOM05D000007 ORTHO05D000676 2.9e-09 66.6 116 34.5
Nitab4.5_0001201g0040 Nicotiana tabacum HOM05D008706 ORTHO05D010440 2.9e-09 66.6 196 31.6
Peaxi162Scf00073g00111 Petunia axillaris HOM05D008706 ORTHO05D010440 2.9e-09 66.6 174 32.2
Sopen12g023140 Solanum pennellii HOM05D008706 ORTHO05D010440 2.9e-09 66.6 169 31.4
FAN23G1330 Fragaria x ananassa HOM05D002420 ORTHO05D002422 4.9e-09 65.9 215 30.7
HanXRQChr01g0010851 Helianthus annuus HOM05D000007 ORTHO05D000521 4.9e-09 65.9 142 33.1
QL11p009094 Quercus lobata HOM05D001729 ORTHO05D001155 6.4e-09 65.5 104 32.7
Sed0018172 Sechium edule HOM05D007779 ORTHO05D009863 6.4e-09 65.5 204 31.9
Migut.F02080 Erythranthe guttata HOM05D007779 ORTHO05D009863 8.4e-09 65.1 164 31.1
PSO407G0006 Papaver somniferum HOM05D008326 ORTHO05D001155 8.4e-09 65.1 140 31.4
Solyc12g044780.2 Solanum lycopersicum HOM05D008706 ORTHO05D010440 8.4e-09 65.1 169 31.4
Nitab4.5_0002715g0090 Nicotiana tabacum HOM05D008706 ORTHO05D010440 1.1e-08 64.7 154 30.5
Oeu062739.1 Olea europaea HOM05D007779 ORTHO05D009863 1.1e-08 64.7 133 29.3
Solyc12g044775.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 1.1e-08 64.7 169 31.4
Sopen12g023130 Solanum pennellii HOM05D008706 ORTHO05D010440 1.1e-08 64.7 214 30.8
QL06p006111 Quercus lobata HOM05D001729 ORTHO05D001155 1.4e-08 64.3 151 30.5
Sopen12g023120 Solanum pennellii HOM05D008706 ORTHO05D010440 1.4e-08 64.3 169 31.4
Aqoxy6G01076 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 1.9e-08 63.9 172 32.0
Peaxi162Scf01164g10021 Petunia axillaris HOM05D008706 ORTHO05D010440 1.9e-08 63.9 148 33.1
FvH4_1g13490 Fragaria vesca HOM05D002420 ORTHO05D002422 2.5e-08 63.5 215 30.7
FAN19G1318 Fragaria x ananassa HOM05D002420 ORTHO05D002422 2.5e-08 63.5 215 30.7
Oeu007441.1 Olea europaea HOM05D002420 ORTHO05D002422 2.5e-08 63.5 213 27.7
PSO063G7044 Papaver somniferum HOM05D008326 ORTHO05D001155 2.5e-08 63.5 99 32.3
COL.COLO4_22097 Corchorus olitorius HOM05D002420 ORTHO05D002422 3.2e-08 63.2 162 29.0
Lj2A946T25 Lonicera japonica HOM05D001729 ORTHO05D001155 5.5e-08 62.4 157 26.8
Oeu054758.1 Olea europaea HOM05D002420 ORTHO05D002422 5.5e-08 62.4 139 33.1
PSO675G7142 Papaver somniferum HOM05D008326 ORTHO05D001155 5.5e-08 62.4 137 28.5
Peaxi162Scf01164g00027 Petunia axillaris HOM05D008706 ORTHO05D010440 7.1e-08 62.0 111 34.2
HanXRQChr02g0054011 Helianthus annuus HOM05D002420 ORTHO05D002422 9.3e-08 61.6 172 31.4
Lsat_1_v5_gn_5_31100 Lactuca sativa HOM05D001729 ORTHO05D001155 1.2e-07 61.2 175 28.6
Lj2C966T3 Lonicera japonica HOM05D001729 ORTHO05D001155 1.2e-07 61.2 122 31.1
PSO161G0051 Papaver somniferum HOM05D008326 ORTHO05D001155 1.2e-07 61.2 140 30.0
ECA246G1437 Erigeron canadensis HOM05D008898 ORTHO05D001155 1.6e-07 60.8 140 30.0
COL.COLO4_22098 Corchorus olitorius HOM05D002420 ORTHO05D002422 2.1e-07 60.5 140 34.3
HanXRQChr04g0121411 Helianthus annuus HOM05D001729 ORTHO05D001155 2.1e-07 60.5 115 33.0
Rhsim08G0237800 Rhododendron simsii HOM05D001729 ORTHO05D001155 2.1e-07 60.5 156 30.1
Solyc11g069120.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 2.1e-07 60.5 151 33.1
PSO210G7271 Papaver somniferum HOM05D008326 ORTHO05D001155 2.7e-07 60.1 105 33.3
Duzib187G1349 Durio zibethinus HOM05D002420 ORTHO05D002422 3.5e-07 59.7 160 28.8
Migut.F01921 Erythranthe guttata HOM05D007779 ORTHO05D009863 3.5e-07 59.7 156 31.4
Manes.18G080900 Manihot esculenta HOM05D002420 ORTHO05D002422 3.5e-07 59.7 154 27.3
RcHm_v2.0_Chr2g0101881 Rosa chinensis HOM05D002420 ORTHO05D002422 3.5e-07 59.7 160 33.8
ECA240G0628 Erigeron canadensis HOM05D000007 ORTHO05D000521 4.6e-07 59.3 143 30.8
Lj7C90T2 Lonicera japonica HOM05D015241 ORTHO05D020831 4.6e-07 59.3 118 33.9
PSO170G0677 Papaver somniferum HOM05D008326 ORTHO05D001155 4.6e-07 59.3 152 27.0
PGSC0003DMG400022280 Solanum tuberosum HOM05D008706 ORTHO05D010440 4.6e-07 59.3 179 29.1
unitig_899.g14987 Utricularia gibba HOM05D002420 ORTHO05D002422 4.6e-07 59.3 166 31.3
Lsat_1_v5_gn_9_104220 Lactuca sativa HOM05D000007 ORTHO05D000521 6.0e-07 58.9 115 32.2
PSO801G0801 Papaver somniferum HOM05D008326 ORTHO05D001155 6.0e-07 58.9 107 30.8
Aqoxy5G01770 Aquilegia oxysepala HOM05D000664 ORTHO05D009863 7.9e-07 58.5 179 25.7
CAN.G358.109 Capsicum annuum HOM05D002420 ORTHO05D002422 7.9e-07 58.5 190 28.9
Thecc.01G037600 Theobroma cacao HOM05D002420 ORTHO05D002422 7.9e-07 58.5 161 29.2
PSO210G5868 Papaver somniferum HOM05D008326 ORTHO05D001155 1.0e-06 58.2 136 28.7
CDE04G2855 Ceratophyllum demersum HOM05D000664 ORTHO05D000491 1.3e-06 57.8 184 28.8
Lsat_1_v5_gn_9_103981 Lactuca sativa HOM05D000007 ORTHO05D000521 1.3e-06 57.8 150 28.7
PSO173G0013 Papaver somniferum HOM05D008326 ORTHO05D001155 1.3e-06 57.8 133 27.1
PSO724G0275 Papaver somniferum HOM05D008326 ORTHO05D001155 1.3e-06 57.8 140 30.7
Potri.007G027200 Populus trichocarpa HOM05D002420 ORTHO05D002422 1.3e-06 57.8 164 29.3
Rhsim08G0220200 Rhododendron simsii HOM05D001729 ORTHO05D001155 1.3e-06 57.8 114 34.2
PGSC0003DMG400009874 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.3e-06 57.8 157 31.8
CDE06G0907 Ceratophyllum demersum HOM05D000855 ORTHO05D000491 1.8e-06 57.4 157 30.6
PSO063G7655 Papaver somniferum HOM05D008326 ORTHO05D001155 1.8e-06 57.4 125 32.0
QL06p006093 Quercus lobata HOM05D001729 ORTHO05D001155 1.8e-06 57.4 80 36.2
TPR.G12691 Trifolium pratense HOM05D001729 ORTHO05D011785 1.8e-06 57.4 141 29.8
Lj2A1107G68 Lonicera japonica HOM05D001729 ORTHO05D001155 2.3e-06 57.0 153 24.2
Rhsim08G0238800 Rhododendron simsii HOM05D001729 ORTHO05D001155 2.3e-06 57.0 157 30.6
Solyc12g044790.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 2.3e-06 57.0 169 30.2
Aqoxy7G00776 Aquilegia oxysepala HOM05D008706 ORTHO05D010440 3.0e-06 56.6 114 31.6
CSS0039427 Camellia sinensis var. sinensis HOM05D002420 ORTHO05D002422 3.0e-06 56.6 165 27.9
Haze_15106 Corylus avellana HOM05D002420 ORTHO05D002422 3.0e-06 56.6 175 30.3
SGA_v2.0_scaffold47G17662 Striga asiatica HOM05D002420 ORTHO05D002422 3.0e-06 56.6 157 26.8
CiPaw.01G036300 Carya illinoinensis HOM05D002420 ORTHO05D002422 3.9e-06 56.2 116 36.2
PSO210G3857 Papaver somniferum HOM05D008326 ORTHO05D001155 3.9e-06 56.2 124 29.8
PSO675G6708 Papaver somniferum HOM05D008326 ORTHO05D001155 3.9e-06 56.2 135 29.6
Lsat_1_v5_gn_0_16480 Lactuca sativa HOM05D008898 ORTHO05D001155 5.1e-06 55.8 136 29.4
Rhsim08G0219900 Rhododendron simsii HOM05D001729 ORTHO05D001155 5.1e-06 55.8 154 29.9
Rhsim11G0068900 Rhododendron simsii HOM05D000664 ORTHO05D000491 5.1e-06 55.8 120 33.3
GSVIVG01018983001 Vitis vinifera HOM05D002420 ORTHO05D002422 5.1e-06 55.8 189 31.2
Gorai.001G014600 Gossypium raimondii HOM05D003814 ORTHO05D004399 6.7e-06 55.5 135 29.6
MBI01_g31985_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 6.7e-06 55.5 118 33.9
Sabra07G0023700 Salix brachista HOM05D002420 ORTHO05D002422 6.7e-06 55.5 140 27.9
CSS0020895 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 8.7e-06 55.1 151 32.5
CSS0028413 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 8.7e-06 55.1 151 32.5
PGSC0003DMG400008068 Solanum tuberosum HOM05D008706 ORTHO05D010440 8.7e-06 55.1 171 31.0
PGSC0003DMG400008116 Solanum tuberosum HOM05D008706 ORTHO05D010440 8.7e-06 55.1 146 29.5


User provided reference genes

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